Experiment: M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03325 and MPMX20_03326 are separated by 19 nucleotides MPMX20_03326 and MPMX20_03327 overlap by 4 nucleotides
MPMX20_03325: MPMX20_03325 - Transaldolase, at 3,493,992 to 3,494,942
_03325
MPMX20_03326: MPMX20_03326 - Transketolase 2, at 3,494,962 to 3,496,950
_03326
MPMX20_03327: MPMX20_03327 - hypothetical protein, at 3,496,947 to 3,497,990
_03327
Position (kb)
3494
3495
3496
3497 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8 at 3494.080 kb on - strand at 3494.080 kb on - strand at 3494.095 kb on + strand, within MPMX20_03325 at 3494.105 kb on + strand, within MPMX20_03325 at 3494.105 kb on + strand, within MPMX20_03325 at 3494.161 kb on + strand, within MPMX20_03325 at 3494.161 kb on + strand, within MPMX20_03325 at 3494.161 kb on + strand, within MPMX20_03325 at 3494.169 kb on - strand, within MPMX20_03325 at 3494.169 kb on - strand, within MPMX20_03325 at 3494.179 kb on - strand, within MPMX20_03325 at 3494.184 kb on - strand, within MPMX20_03325 at 3494.303 kb on + strand, within MPMX20_03325 at 3494.386 kb on - strand, within MPMX20_03325 at 3494.388 kb on + strand, within MPMX20_03325 at 3494.462 kb on + strand, within MPMX20_03325 at 3494.478 kb on + strand, within MPMX20_03325 at 3494.483 kb on + strand, within MPMX20_03325 at 3494.485 kb on - strand, within MPMX20_03325 at 3494.547 kb on - strand, within MPMX20_03325 at 3494.623 kb on + strand, within MPMX20_03325 at 3494.628 kb on + strand, within MPMX20_03325 at 3494.631 kb on - strand, within MPMX20_03325 at 3494.657 kb on - strand, within MPMX20_03325 at 3494.704 kb on + strand, within MPMX20_03325 at 3494.709 kb on - strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.722 kb on + strand, within MPMX20_03325 at 3494.730 kb on - strand, within MPMX20_03325 at 3494.730 kb on - strand, within MPMX20_03325 at 3494.730 kb on - strand, within MPMX20_03325 at 3494.730 kb on - strand, within MPMX20_03325 at 3494.730 kb on - strand, within MPMX20_03325 at 3494.730 kb on - strand, within MPMX20_03325 at 3494.785 kb on + strand, within MPMX20_03325 at 3494.793 kb on - strand, within MPMX20_03325 at 3494.804 kb on + strand, within MPMX20_03325 at 3494.812 kb on - strand, within MPMX20_03325 at 3494.899 kb on - strand at 3494.944 kb on - strand at 3494.969 kb on + strand at 3494.974 kb on + strand at 3494.974 kb on + strand at 3494.974 kb on - strand at 3495.036 kb on + strand at 3495.128 kb on - strand at 3495.134 kb on + strand at 3495.142 kb on - strand at 3495.142 kb on - strand at 3495.158 kb on + strand at 3495.158 kb on + strand at 3495.158 kb on + strand at 3495.158 kb on + strand at 3495.166 kb on - strand, within MPMX20_03326 at 3495.166 kb on - strand, within MPMX20_03326 at 3495.166 kb on - strand, within MPMX20_03326 at 3495.166 kb on - strand, within MPMX20_03326 at 3495.168 kb on + strand, within MPMX20_03326 at 3495.168 kb on + strand, within MPMX20_03326 at 3495.176 kb on - strand, within MPMX20_03326 at 3495.176 kb on - strand, within MPMX20_03326 at 3495.186 kb on - strand, within MPMX20_03326 at 3495.269 kb on + strand, within MPMX20_03326 at 3495.307 kb on + strand, within MPMX20_03326 at 3495.313 kb on + strand, within MPMX20_03326 at 3495.313 kb on + strand, within MPMX20_03326 at 3495.313 kb on + strand, within MPMX20_03326 at 3495.340 kb on - strand, within MPMX20_03326 at 3495.411 kb on + strand, within MPMX20_03326 at 3495.428 kb on + strand, within MPMX20_03326 at 3495.473 kb on + strand, within MPMX20_03326 at 3495.481 kb on - strand, within MPMX20_03326 at 3495.481 kb on - strand, within MPMX20_03326 at 3495.481 kb on - strand, within MPMX20_03326 at 3495.483 kb on + strand, within MPMX20_03326 at 3495.507 kb on + strand, within MPMX20_03326 at 3495.562 kb on + strand, within MPMX20_03326 at 3495.751 kb on - strand, within MPMX20_03326 at 3495.756 kb on - strand, within MPMX20_03326 at 3495.769 kb on + strand, within MPMX20_03326 at 3495.777 kb on - strand, within MPMX20_03326 at 3495.833 kb on - strand, within MPMX20_03326 at 3495.853 kb on - strand, within MPMX20_03326 at 3495.980 kb on + strand, within MPMX20_03326 at 3495.980 kb on + strand, within MPMX20_03326 at 3496.005 kb on + strand, within MPMX20_03326 at 3496.029 kb on + strand, within MPMX20_03326 at 3496.072 kb on - strand, within MPMX20_03326 at 3496.073 kb on + strand, within MPMX20_03326 at 3496.130 kb on - strand, within MPMX20_03326 at 3496.159 kb on + strand, within MPMX20_03326 at 3496.181 kb on + strand, within MPMX20_03326 at 3496.189 kb on - strand, within MPMX20_03326 at 3496.242 kb on + strand, within MPMX20_03326 at 3496.242 kb on + strand, within MPMX20_03326 at 3496.242 kb on + strand, within MPMX20_03326 at 3496.316 kb on - strand, within MPMX20_03326 at 3496.357 kb on + strand, within MPMX20_03326 at 3496.365 kb on - strand, within MPMX20_03326 at 3496.374 kb on + strand, within MPMX20_03326 at 3496.375 kb on - strand, within MPMX20_03326 at 3496.384 kb on + strand, within MPMX20_03326 at 3496.419 kb on + strand, within MPMX20_03326 at 3496.427 kb on - strand, within MPMX20_03326 at 3496.435 kb on - strand, within MPMX20_03326 at 3496.446 kb on + strand, within MPMX20_03326 at 3496.451 kb on + strand, within MPMX20_03326 at 3496.516 kb on + strand, within MPMX20_03326 at 3496.523 kb on + strand, within MPMX20_03326 at 3496.544 kb on + strand, within MPMX20_03326 at 3496.730 kb on + strand, within MPMX20_03326 at 3496.742 kb on - strand, within MPMX20_03326 at 3496.748 kb on - strand, within MPMX20_03326 at 3496.957 kb on + strand at 3496.958 kb on + strand at 3497.017 kb on - strand at 3497.110 kb on - strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.248 kb on + strand, within MPMX20_03327 at 3497.338 kb on + strand, within MPMX20_03327 at 3497.370 kb on + strand, within MPMX20_03327 at 3497.388 kb on + strand, within MPMX20_03327 at 3497.425 kb on - strand, within MPMX20_03327 at 3497.503 kb on + strand, within MPMX20_03327 at 3497.526 kb on - strand, within MPMX20_03327 at 3497.569 kb on + strand, within MPMX20_03327 at 3497.595 kb on + strand, within MPMX20_03327 at 3497.595 kb on + strand, within MPMX20_03327 at 3497.595 kb on + strand, within MPMX20_03327 at 3497.603 kb on - strand, within MPMX20_03327 at 3497.703 kb on + strand, within MPMX20_03327 at 3497.797 kb on - strand, within MPMX20_03327 at 3497.923 kb on + strand at 3497.929 kb on + strand at 3497.929 kb on + strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,494,080 - +1.3 3,494,080 - -1.8 3,494,095 + MPMX20_03325 0.11 +0.1 3,494,105 + MPMX20_03325 0.12 -2.1 3,494,105 + MPMX20_03325 0.12 -0.2 3,494,161 + MPMX20_03325 0.18 -0.9 3,494,161 + MPMX20_03325 0.18 -0.2 3,494,161 + MPMX20_03325 0.18 +0.6 3,494,169 - MPMX20_03325 0.19 -0.1 3,494,169 - MPMX20_03325 0.19 -1.5 3,494,179 - MPMX20_03325 0.20 -0.4 3,494,184 - MPMX20_03325 0.20 +1.5 3,494,303 + MPMX20_03325 0.33 -0.1 3,494,386 - MPMX20_03325 0.41 -1.5 3,494,388 + MPMX20_03325 0.42 +1.1 3,494,462 + MPMX20_03325 0.49 -0.8 3,494,478 + MPMX20_03325 0.51 -1.1 3,494,483 + MPMX20_03325 0.52 -1.1 3,494,485 - MPMX20_03325 0.52 -0.2 3,494,547 - MPMX20_03325 0.58 -0.1 3,494,623 + MPMX20_03325 0.66 -0.6 3,494,628 + MPMX20_03325 0.67 +0.8 3,494,631 - MPMX20_03325 0.67 +0.0 3,494,657 - MPMX20_03325 0.70 -0.0 3,494,704 + MPMX20_03325 0.75 +0.3 3,494,709 - MPMX20_03325 0.75 -0.9 3,494,722 + MPMX20_03325 0.77 -0.1 3,494,722 + MPMX20_03325 0.77 +0.6 3,494,722 + MPMX20_03325 0.77 -0.6 3,494,722 + MPMX20_03325 0.77 -0.1 3,494,722 + MPMX20_03325 0.77 -1.0 3,494,722 + MPMX20_03325 0.77 -0.9 3,494,722 + MPMX20_03325 0.77 +0.4 3,494,722 + MPMX20_03325 0.77 -0.1 3,494,722 + MPMX20_03325 0.77 -1.8 3,494,722 + MPMX20_03325 0.77 -0.1 3,494,722 + MPMX20_03325 0.77 -1.1 3,494,730 - MPMX20_03325 0.78 +2.0 3,494,730 - MPMX20_03325 0.78 +1.6 3,494,730 - MPMX20_03325 0.78 +2.7 3,494,730 - MPMX20_03325 0.78 -0.3 3,494,730 - MPMX20_03325 0.78 -0.4 3,494,730 - MPMX20_03325 0.78 -0.6 3,494,785 + MPMX20_03325 0.83 -2.4 3,494,793 - MPMX20_03325 0.84 +0.9 3,494,804 + MPMX20_03325 0.85 -2.6 3,494,812 - MPMX20_03325 0.86 -0.6 3,494,899 - +0.1 3,494,944 - -0.9 3,494,969 + -0.2 3,494,974 + -0.6 3,494,974 + +1.1 3,494,974 - -0.6 3,495,036 + -0.6 3,495,128 - -1.1 3,495,134 + +0.3 3,495,142 - +3.2 3,495,142 - -0.4 3,495,158 + +1.8 3,495,158 + -1.2 3,495,158 + -1.9 3,495,158 + -0.6 3,495,166 - MPMX20_03326 0.10 -0.3 3,495,166 - MPMX20_03326 0.10 +1.7 3,495,166 - MPMX20_03326 0.10 -0.0 3,495,166 - MPMX20_03326 0.10 +0.4 3,495,168 + MPMX20_03326 0.10 -1.7 3,495,168 + MPMX20_03326 0.10 +1.0 3,495,176 - MPMX20_03326 0.11 -0.7 3,495,176 - MPMX20_03326 0.11 -2.6 3,495,186 - MPMX20_03326 0.11 -0.7 3,495,269 + MPMX20_03326 0.15 -0.3 3,495,307 + MPMX20_03326 0.17 -0.4 3,495,313 + MPMX20_03326 0.18 +2.7 3,495,313 + MPMX20_03326 0.18 -0.0 3,495,313 + MPMX20_03326 0.18 -1.7 3,495,340 - MPMX20_03326 0.19 -1.9 3,495,411 + MPMX20_03326 0.23 +1.1 3,495,428 + MPMX20_03326 0.23 -0.6 3,495,473 + MPMX20_03326 0.26 +0.4 3,495,481 - MPMX20_03326 0.26 +1.1 3,495,481 - MPMX20_03326 0.26 -1.4 3,495,481 - MPMX20_03326 0.26 +1.1 3,495,483 + MPMX20_03326 0.26 -1.2 3,495,507 + MPMX20_03326 0.27 +0.6 3,495,562 + MPMX20_03326 0.30 -0.1 3,495,751 - MPMX20_03326 0.40 +0.9 3,495,756 - MPMX20_03326 0.40 -1.1 3,495,769 + MPMX20_03326 0.41 -0.3 3,495,777 - MPMX20_03326 0.41 +0.5 3,495,833 - MPMX20_03326 0.44 +0.6 3,495,853 - MPMX20_03326 0.45 -2.5 3,495,980 + MPMX20_03326 0.51 +1.1 3,495,980 + MPMX20_03326 0.51 +3.7 3,496,005 + MPMX20_03326 0.52 -1.8 3,496,029 + MPMX20_03326 0.54 -1.6 3,496,072 - MPMX20_03326 0.56 -1.2 3,496,073 + MPMX20_03326 0.56 -0.8 3,496,130 - MPMX20_03326 0.59 +8.3 3,496,159 + MPMX20_03326 0.60 -2.9 3,496,181 + MPMX20_03326 0.61 +0.9 3,496,189 - MPMX20_03326 0.62 +1.1 3,496,242 + MPMX20_03326 0.64 -0.1 3,496,242 + MPMX20_03326 0.64 +1.7 3,496,242 + MPMX20_03326 0.64 -0.6 3,496,316 - MPMX20_03326 0.68 -2.2 3,496,357 + MPMX20_03326 0.70 +1.5 3,496,365 - MPMX20_03326 0.71 -1.8 3,496,374 + MPMX20_03326 0.71 +1.0 3,496,375 - MPMX20_03326 0.71 +0.1 3,496,384 + MPMX20_03326 0.71 -0.3 3,496,419 + MPMX20_03326 0.73 +0.3 3,496,427 - MPMX20_03326 0.74 +0.3 3,496,435 - MPMX20_03326 0.74 -1.4 3,496,446 + MPMX20_03326 0.75 -0.8 3,496,451 + MPMX20_03326 0.75 +0.4 3,496,516 + MPMX20_03326 0.78 +0.1 3,496,523 + MPMX20_03326 0.78 -0.1 3,496,544 + MPMX20_03326 0.80 -2.2 3,496,730 + MPMX20_03326 0.89 -1.3 3,496,742 - MPMX20_03326 0.89 +0.3 3,496,748 - MPMX20_03326 0.90 +1.4 3,496,957 + -1.4 3,496,958 + +0.5 3,497,017 - -1.9 3,497,110 - MPMX20_03327 0.16 -2.9 3,497,189 + MPMX20_03327 0.23 +2.4 3,497,189 + MPMX20_03327 0.23 -0.9 3,497,189 + MPMX20_03327 0.23 +1.7 3,497,189 + MPMX20_03327 0.23 -1.0 3,497,189 + MPMX20_03327 0.23 +0.5 3,497,189 + MPMX20_03327 0.23 -0.6 3,497,189 + MPMX20_03327 0.23 +4.0 3,497,197 - MPMX20_03327 0.24 +1.4 3,497,197 - MPMX20_03327 0.24 +1.1 3,497,197 - MPMX20_03327 0.24 +0.4 3,497,197 - MPMX20_03327 0.24 +0.9 3,497,197 - MPMX20_03327 0.24 -1.5 3,497,197 - MPMX20_03327 0.24 +2.3 3,497,197 - MPMX20_03327 0.24 -0.9 3,497,197 - MPMX20_03327 0.24 +1.3 3,497,197 - MPMX20_03327 0.24 -2.1 3,497,248 + MPMX20_03327 0.29 -0.6 3,497,338 + MPMX20_03327 0.37 -1.7 3,497,370 + MPMX20_03327 0.41 -1.9 3,497,388 + MPMX20_03327 0.42 -0.4 3,497,425 - MPMX20_03327 0.46 -0.6 3,497,503 + MPMX20_03327 0.53 +0.2 3,497,526 - MPMX20_03327 0.55 -0.1 3,497,569 + MPMX20_03327 0.60 +0.4 3,497,595 + MPMX20_03327 0.62 -1.7 3,497,595 + MPMX20_03327 0.62 -0.2 3,497,595 + MPMX20_03327 0.62 -1.2 3,497,603 - MPMX20_03327 0.63 +1.1 3,497,703 + MPMX20_03327 0.72 +0.7 3,497,797 - MPMX20_03327 0.81 -1.4 3,497,923 + -1.9 3,497,929 + +0.7 3,497,929 + -1.4 3,497,937 - +0.9 3,497,937 - -0.4 3,497,937 - -0.1 3,497,937 - -0.7 3,497,937 - +0.2 3,497,937 - +0.4 3,497,937 - +0.7
Or see this region's nucleotide sequence