Experiment: 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02144 and MPMX20_02145 are separated by 14 nucleotides MPMX20_02145 and MPMX20_02146 are separated by 7 nucleotides MPMX20_02146 and MPMX20_02147 overlap by 4 nucleotides MPMX20_02147 and MPMX20_02148 are separated by 2 nucleotides
MPMX20_02144: MPMX20_02144 - 1,2-phenylacetyl-CoA epoxidase, subunit C, at 2,237,120 to 2,237,866
_02144
MPMX20_02145: MPMX20_02145 - Putative 1,2-phenylacetyl-CoA epoxidase, subunit D, at 2,237,881 to 2,238,378
_02145
MPMX20_02146: MPMX20_02146 - 1,2-phenylacetyl-CoA epoxidase, subunit E, at 2,238,386 to 2,239,456
_02146
MPMX20_02147: MPMX20_02147 - 2,3-dehydroadipyl-CoA hydratase, at 2,239,453 to 2,240,220
_02147
MPMX20_02148: MPMX20_02148 - 1,2-epoxyphenylacetyl-CoA isomerase, at 2,240,223 to 2,241,008
_02148
Position (kb)
2238
2239
2240 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2237.413 kb on - strand, within MPMX20_02144 at 2237.461 kb on - strand, within MPMX20_02144 at 2237.461 kb on - strand, within MPMX20_02144 at 2237.511 kb on + strand, within MPMX20_02144 at 2237.568 kb on + strand, within MPMX20_02144 at 2237.601 kb on + strand, within MPMX20_02144 at 2237.619 kb on - strand, within MPMX20_02144 at 2237.624 kb on - strand, within MPMX20_02144 at 2237.626 kb on + strand, within MPMX20_02144 at 2237.683 kb on - strand, within MPMX20_02144 at 2237.716 kb on + strand, within MPMX20_02144 at 2237.746 kb on - strand, within MPMX20_02144 at 2237.776 kb on + strand, within MPMX20_02144 at 2237.816 kb on - strand at 2237.816 kb on - strand at 2237.840 kb on - strand at 2237.870 kb on - strand at 2237.875 kb on - strand at 2237.875 kb on - strand at 2237.880 kb on - strand at 2237.965 kb on + strand, within MPMX20_02145 at 2238.012 kb on + strand, within MPMX20_02145 at 2238.012 kb on + strand, within MPMX20_02145 at 2238.012 kb on + strand, within MPMX20_02145 at 2238.040 kb on - strand, within MPMX20_02145 at 2238.054 kb on - strand, within MPMX20_02145 at 2238.110 kb on + strand, within MPMX20_02145 at 2238.110 kb on + strand, within MPMX20_02145 at 2238.110 kb on + strand, within MPMX20_02145 at 2238.138 kb on + strand, within MPMX20_02145 at 2238.164 kb on + strand, within MPMX20_02145 at 2238.225 kb on + strand, within MPMX20_02145 at 2238.278 kb on + strand, within MPMX20_02145 at 2238.344 kb on + strand at 2238.390 kb on - strand at 2238.390 kb on - strand at 2238.463 kb on + strand at 2238.463 kb on + strand at 2238.471 kb on - strand at 2238.506 kb on + strand, within MPMX20_02146 at 2238.570 kb on + strand, within MPMX20_02146 at 2238.589 kb on - strand, within MPMX20_02146 at 2238.594 kb on - strand, within MPMX20_02146 at 2238.669 kb on + strand, within MPMX20_02146 at 2238.753 kb on + strand, within MPMX20_02146 at 2238.759 kb on + strand, within MPMX20_02146 at 2238.792 kb on + strand, within MPMX20_02146 at 2238.820 kb on + strand, within MPMX20_02146 at 2238.820 kb on + strand, within MPMX20_02146 at 2238.828 kb on - strand, within MPMX20_02146 at 2238.844 kb on + strand, within MPMX20_02146 at 2238.921 kb on + strand, within MPMX20_02146 at 2238.921 kb on + strand, within MPMX20_02146 at 2238.929 kb on + strand, within MPMX20_02146 at 2238.929 kb on - strand, within MPMX20_02146 at 2239.024 kb on - strand, within MPMX20_02146 at 2239.030 kb on - strand, within MPMX20_02146 at 2239.076 kb on + strand, within MPMX20_02146 at 2239.130 kb on - strand, within MPMX20_02146 at 2239.278 kb on - strand, within MPMX20_02146 at 2239.278 kb on - strand, within MPMX20_02146 at 2239.298 kb on - strand, within MPMX20_02146 at 2239.353 kb on + strand at 2239.353 kb on + strand at 2239.361 kb on - strand at 2239.361 kb on - strand at 2239.380 kb on + strand at 2239.400 kb on - strand at 2239.413 kb on + strand at 2239.473 kb on - strand at 2239.536 kb on + strand, within MPMX20_02147 at 2239.611 kb on + strand, within MPMX20_02147 at 2239.633 kb on - strand, within MPMX20_02147 at 2239.650 kb on - strand, within MPMX20_02147 at 2239.788 kb on + strand, within MPMX20_02147 at 2239.788 kb on + strand, within MPMX20_02147 at 2239.935 kb on + strand, within MPMX20_02147 at 2239.937 kb on + strand, within MPMX20_02147 at 2239.969 kb on - strand, within MPMX20_02147 at 2239.979 kb on - strand, within MPMX20_02147 at 2239.983 kb on + strand, within MPMX20_02147 at 2240.037 kb on - strand, within MPMX20_02147 at 2240.048 kb on - strand, within MPMX20_02147 at 2240.116 kb on + strand, within MPMX20_02147 at 2240.116 kb on + strand, within MPMX20_02147 at 2240.116 kb on + strand, within MPMX20_02147 at 2240.124 kb on - strand, within MPMX20_02147 at 2240.130 kb on + strand, within MPMX20_02147 at 2240.142 kb on + strand, within MPMX20_02147 at 2240.160 kb on - strand at 2240.271 kb on - strand at 2240.276 kb on - strand at 2240.359 kb on - strand, within MPMX20_02148
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,237,413 - MPMX20_02144 0.39 -1.8 2,237,461 - MPMX20_02144 0.46 +1.2 2,237,461 - MPMX20_02144 0.46 -0.9 2,237,511 + MPMX20_02144 0.52 -0.2 2,237,568 + MPMX20_02144 0.60 -0.7 2,237,601 + MPMX20_02144 0.64 -0.1 2,237,619 - MPMX20_02144 0.67 +0.9 2,237,624 - MPMX20_02144 0.67 -1.5 2,237,626 + MPMX20_02144 0.68 -2.1 2,237,683 - MPMX20_02144 0.75 +1.9 2,237,716 + MPMX20_02144 0.80 -0.8 2,237,746 - MPMX20_02144 0.84 +0.3 2,237,776 + MPMX20_02144 0.88 -0.5 2,237,816 - +0.5 2,237,816 - -1.6 2,237,840 - -1.4 2,237,870 - -2.2 2,237,875 - -2.0 2,237,875 - -0.5 2,237,880 - +0.2 2,237,965 + MPMX20_02145 0.17 -1.5 2,238,012 + MPMX20_02145 0.26 -0.3 2,238,012 + MPMX20_02145 0.26 -0.8 2,238,012 + MPMX20_02145 0.26 -0.0 2,238,040 - MPMX20_02145 0.32 +0.9 2,238,054 - MPMX20_02145 0.35 -1.7 2,238,110 + MPMX20_02145 0.46 -1.3 2,238,110 + MPMX20_02145 0.46 -0.7 2,238,110 + MPMX20_02145 0.46 -1.9 2,238,138 + MPMX20_02145 0.52 +0.5 2,238,164 + MPMX20_02145 0.57 -0.8 2,238,225 + MPMX20_02145 0.69 +0.5 2,238,278 + MPMX20_02145 0.80 -0.9 2,238,344 + -0.7 2,238,390 - -0.2 2,238,390 - -1.8 2,238,463 + -1.1 2,238,463 + -0.4 2,238,471 - +1.7 2,238,506 + MPMX20_02146 0.11 -1.0 2,238,570 + MPMX20_02146 0.17 +0.3 2,238,589 - MPMX20_02146 0.19 -1.3 2,238,594 - MPMX20_02146 0.19 -1.6 2,238,669 + MPMX20_02146 0.26 -0.7 2,238,753 + MPMX20_02146 0.34 -3.0 2,238,759 + MPMX20_02146 0.35 -1.8 2,238,792 + MPMX20_02146 0.38 -0.8 2,238,820 + MPMX20_02146 0.41 -0.3 2,238,820 + MPMX20_02146 0.41 +0.1 2,238,828 - MPMX20_02146 0.41 -0.9 2,238,844 + MPMX20_02146 0.43 -0.2 2,238,921 + MPMX20_02146 0.50 -1.2 2,238,921 + MPMX20_02146 0.50 -1.6 2,238,929 + MPMX20_02146 0.51 -1.1 2,238,929 - MPMX20_02146 0.51 -0.6 2,239,024 - MPMX20_02146 0.60 +2.3 2,239,030 - MPMX20_02146 0.60 -1.8 2,239,076 + MPMX20_02146 0.64 -1.0 2,239,130 - MPMX20_02146 0.69 +0.9 2,239,278 - MPMX20_02146 0.83 -0.3 2,239,278 - MPMX20_02146 0.83 -0.4 2,239,298 - MPMX20_02146 0.85 -1.9 2,239,353 + -0.1 2,239,353 + -1.9 2,239,361 - +2.0 2,239,361 - -0.1 2,239,380 + -0.8 2,239,400 - +0.3 2,239,413 + -0.8 2,239,473 - -0.5 2,239,536 + MPMX20_02147 0.11 -0.5 2,239,611 + MPMX20_02147 0.21 +0.2 2,239,633 - MPMX20_02147 0.23 -1.6 2,239,650 - MPMX20_02147 0.26 +1.5 2,239,788 + MPMX20_02147 0.44 -0.1 2,239,788 + MPMX20_02147 0.44 -1.6 2,239,935 + MPMX20_02147 0.63 -2.2 2,239,937 + MPMX20_02147 0.63 -2.6 2,239,969 - MPMX20_02147 0.67 -1.0 2,239,979 - MPMX20_02147 0.68 +0.9 2,239,983 + MPMX20_02147 0.69 -0.1 2,240,037 - MPMX20_02147 0.76 -0.6 2,240,048 - MPMX20_02147 0.77 -2.2 2,240,116 + MPMX20_02147 0.86 -1.8 2,240,116 + MPMX20_02147 0.86 -2.8 2,240,116 + MPMX20_02147 0.86 -2.9 2,240,124 - MPMX20_02147 0.87 -2.6 2,240,130 + MPMX20_02147 0.88 -1.5 2,240,142 + MPMX20_02147 0.90 -0.9 2,240,160 - +1.5 2,240,271 - -0.5 2,240,276 - -2.5 2,240,359 - MPMX20_02148 0.17 -2.2
Or see this region's nucleotide sequence