Experiment: 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01608 and MPMX20_01609 are separated by 163 nucleotides MPMX20_01609 and MPMX20_01610 overlap by 44 nucleotides MPMX20_01610 and MPMX20_01611 are separated by 19 nucleotides MPMX20_01611 and MPMX20_01612 are separated by 123 nucleotides
MPMX20_01608: MPMX20_01608 - Cell division inhibitor SulA, at 1,700,736 to 1,701,299
_01608
MPMX20_01609: MPMX20_01609 - Protein Sxy, at 1,701,463 to 1,702,089
_01609
MPMX20_01610: MPMX20_01610 - Inner membrane protein YccS, at 1,702,046 to 1,704,208
_01610
MPMX20_01611: MPMX20_01611 - Inner membrane protein YccF, at 1,704,228 to 1,704,674
_01611
MPMX20_01612: MPMX20_01612 - DNA helicase IV, at 1,704,798 to 1,706,852
_01612
Position (kb)
1702
1703
1704
1705 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 1701.098 kb on + strand, within MPMX20_01608 at 1701.147 kb on + strand, within MPMX20_01608 at 1701.155 kb on - strand, within MPMX20_01608 at 1701.155 kb on - strand, within MPMX20_01608 at 1701.172 kb on + strand, within MPMX20_01608 at 1701.180 kb on - strand, within MPMX20_01608 at 1701.207 kb on + strand, within MPMX20_01608 at 1701.207 kb on - strand, within MPMX20_01608 at 1701.221 kb on + strand, within MPMX20_01608 at 1701.240 kb on - strand, within MPMX20_01608 at 1701.345 kb on + strand at 1701.515 kb on - strand at 1701.516 kb on - strand at 1701.533 kb on + strand, within MPMX20_01609 at 1701.534 kb on - strand, within MPMX20_01609 at 1701.541 kb on - strand, within MPMX20_01609 at 1701.541 kb on - strand, within MPMX20_01609 at 1701.541 kb on - strand, within MPMX20_01609 at 1701.543 kb on + strand, within MPMX20_01609 at 1701.551 kb on + strand, within MPMX20_01609 at 1701.561 kb on + strand, within MPMX20_01609 at 1701.610 kb on + strand, within MPMX20_01609 at 1701.610 kb on + strand, within MPMX20_01609 at 1701.612 kb on - strand, within MPMX20_01609 at 1701.680 kb on - strand, within MPMX20_01609 at 1701.686 kb on + strand, within MPMX20_01609 at 1701.722 kb on + strand, within MPMX20_01609 at 1701.740 kb on - strand, within MPMX20_01609 at 1701.747 kb on + strand, within MPMX20_01609 at 1701.861 kb on + strand, within MPMX20_01609 at 1701.861 kb on + strand, within MPMX20_01609 at 1701.961 kb on - strand, within MPMX20_01609 at 1701.961 kb on - strand, within MPMX20_01609 at 1701.971 kb on + strand, within MPMX20_01609 at 1701.975 kb on + strand, within MPMX20_01609 at 1701.983 kb on - strand, within MPMX20_01609 at 1701.986 kb on + strand, within MPMX20_01609 at 1701.986 kb on + strand, within MPMX20_01609 at 1702.002 kb on - strand, within MPMX20_01609 at 1702.011 kb on - strand, within MPMX20_01609 at 1702.039 kb on + strand at 1702.043 kb on + strand at 1702.051 kb on - strand at 1702.061 kb on + strand at 1702.064 kb on - strand at 1702.079 kb on + strand at 1702.253 kb on + strand at 1702.261 kb on - strand at 1702.284 kb on + strand, within MPMX20_01610 at 1702.365 kb on + strand, within MPMX20_01610 at 1702.369 kb on + strand, within MPMX20_01610 at 1702.423 kb on + strand, within MPMX20_01610 at 1702.461 kb on + strand, within MPMX20_01610 at 1702.469 kb on + strand, within MPMX20_01610 at 1702.494 kb on - strand, within MPMX20_01610 at 1702.517 kb on + strand, within MPMX20_01610 at 1702.531 kb on + strand, within MPMX20_01610 at 1702.539 kb on - strand, within MPMX20_01610 at 1702.541 kb on + strand, within MPMX20_01610 at 1702.557 kb on - strand, within MPMX20_01610 at 1702.577 kb on + strand, within MPMX20_01610 at 1702.626 kb on - strand, within MPMX20_01610 at 1702.676 kb on + strand, within MPMX20_01610 at 1702.676 kb on + strand, within MPMX20_01610 at 1702.676 kb on + strand, within MPMX20_01610 at 1702.684 kb on - strand, within MPMX20_01610 at 1702.684 kb on - strand, within MPMX20_01610 at 1702.684 kb on - strand, within MPMX20_01610 at 1702.684 kb on - strand, within MPMX20_01610 at 1702.684 kb on - strand, within MPMX20_01610 at 1702.684 kb on - strand, within MPMX20_01610 at 1702.684 kb on - strand, within MPMX20_01610 at 1702.684 kb on - strand, within MPMX20_01610 at 1702.695 kb on - strand, within MPMX20_01610 at 1702.708 kb on + strand, within MPMX20_01610 at 1702.708 kb on + strand, within MPMX20_01610 at 1702.708 kb on + strand, within MPMX20_01610 at 1702.708 kb on + strand, within MPMX20_01610 at 1702.708 kb on + strand, within MPMX20_01610 at 1702.708 kb on + strand, within MPMX20_01610 at 1702.716 kb on - strand, within MPMX20_01610 at 1702.716 kb on - strand, within MPMX20_01610 at 1702.716 kb on - strand, within MPMX20_01610 at 1702.773 kb on - strand, within MPMX20_01610 at 1702.784 kb on - strand, within MPMX20_01610 at 1702.789 kb on - strand, within MPMX20_01610 at 1702.811 kb on + strand, within MPMX20_01610 at 1702.814 kb on - strand, within MPMX20_01610 at 1702.817 kb on + strand, within MPMX20_01610 at 1702.844 kb on - strand, within MPMX20_01610 at 1702.850 kb on - strand, within MPMX20_01610 at 1702.891 kb on + strand, within MPMX20_01610 at 1702.911 kb on + strand, within MPMX20_01610 at 1702.951 kb on - strand, within MPMX20_01610 at 1702.999 kb on - strand, within MPMX20_01610 at 1703.006 kb on - strand, within MPMX20_01610 at 1703.033 kb on + strand, within MPMX20_01610 at 1703.089 kb on - strand, within MPMX20_01610 at 1703.093 kb on + strand, within MPMX20_01610 at 1703.101 kb on - strand, within MPMX20_01610 at 1703.101 kb on - strand, within MPMX20_01610 at 1703.239 kb on + strand, within MPMX20_01610 at 1703.250 kb on + strand, within MPMX20_01610 at 1703.366 kb on - strand, within MPMX20_01610 at 1703.436 kb on - strand, within MPMX20_01610 at 1703.436 kb on - strand, within MPMX20_01610 at 1703.436 kb on - strand, within MPMX20_01610 at 1703.466 kb on + strand, within MPMX20_01610 at 1703.466 kb on + strand, within MPMX20_01610 at 1703.466 kb on + strand, within MPMX20_01610 at 1703.466 kb on + strand, within MPMX20_01610 at 1703.466 kb on + strand, within MPMX20_01610 at 1703.472 kb on - strand, within MPMX20_01610 at 1703.474 kb on - strand, within MPMX20_01610 at 1703.474 kb on - strand, within MPMX20_01610 at 1703.474 kb on - strand, within MPMX20_01610 at 1703.474 kb on - strand, within MPMX20_01610 at 1703.474 kb on - strand, within MPMX20_01610 at 1703.500 kb on - strand, within MPMX20_01610 at 1703.540 kb on + strand, within MPMX20_01610 at 1703.553 kb on + strand, within MPMX20_01610 at 1703.705 kb on + strand, within MPMX20_01610 at 1703.705 kb on + strand, within MPMX20_01610 at 1703.705 kb on + strand, within MPMX20_01610 at 1703.705 kb on + strand, within MPMX20_01610 at 1703.705 kb on + strand, within MPMX20_01610 at 1703.710 kb on + strand, within MPMX20_01610 at 1703.713 kb on - strand, within MPMX20_01610 at 1703.713 kb on - strand, within MPMX20_01610 at 1703.713 kb on - strand, within MPMX20_01610 at 1703.755 kb on + strand, within MPMX20_01610 at 1703.755 kb on + strand, within MPMX20_01610 at 1703.755 kb on + strand, within MPMX20_01610 at 1703.823 kb on - strand, within MPMX20_01610 at 1703.871 kb on + strand, within MPMX20_01610 at 1703.879 kb on - strand, within MPMX20_01610 at 1703.879 kb on - strand, within MPMX20_01610 at 1703.881 kb on + strand, within MPMX20_01610 at 1703.881 kb on + strand, within MPMX20_01610 at 1703.889 kb on - strand, within MPMX20_01610 at 1703.889 kb on - strand, within MPMX20_01610 at 1703.920 kb on + strand, within MPMX20_01610 at 1703.928 kb on - strand, within MPMX20_01610 at 1703.928 kb on - strand, within MPMX20_01610 at 1703.928 kb on - strand, within MPMX20_01610 at 1703.928 kb on - strand, within MPMX20_01610 at 1703.941 kb on + strand, within MPMX20_01610 at 1703.941 kb on + strand, within MPMX20_01610 at 1703.962 kb on + strand, within MPMX20_01610 at 1703.965 kb on - strand, within MPMX20_01610 at 1703.970 kb on - strand, within MPMX20_01610 at 1703.970 kb on - strand, within MPMX20_01610 at 1703.970 kb on - strand, within MPMX20_01610 at 1704.017 kb on - strand at 1704.075 kb on - strand at 1704.075 kb on - strand at 1704.075 kb on - strand at 1704.126 kb on + strand at 1704.126 kb on + strand at 1704.126 kb on + strand at 1704.163 kb on + strand at 1704.173 kb on + strand at 1704.181 kb on - strand at 1704.269 kb on + strand at 1704.289 kb on + strand, within MPMX20_01611 at 1704.312 kb on - strand, within MPMX20_01611 at 1704.372 kb on - strand, within MPMX20_01611 at 1704.374 kb on + strand, within MPMX20_01611 at 1704.405 kb on - strand, within MPMX20_01611 at 1704.407 kb on + strand, within MPMX20_01611 at 1704.415 kb on - strand, within MPMX20_01611 at 1704.415 kb on - strand, within MPMX20_01611 at 1704.459 kb on + strand, within MPMX20_01611 at 1704.467 kb on - strand, within MPMX20_01611 at 1704.508 kb on + strand, within MPMX20_01611 at 1704.561 kb on + strand, within MPMX20_01611 at 1704.562 kb on + strand, within MPMX20_01611 at 1704.569 kb on - strand, within MPMX20_01611 at 1704.570 kb on - strand, within MPMX20_01611 at 1704.589 kb on + strand, within MPMX20_01611 at 1704.589 kb on + strand, within MPMX20_01611 at 1704.665 kb on - strand at 1704.680 kb on - strand at 1704.698 kb on + strand at 1704.732 kb on + strand at 1704.740 kb on + strand at 1704.740 kb on + strand at 1704.740 kb on + strand at 1704.740 kb on + strand at 1704.740 kb on + strand at 1704.740 kb on + strand at 1704.748 kb on - strand at 1704.748 kb on - strand at 1704.748 kb on - strand at 1704.748 kb on - strand at 1704.748 kb on - strand at 1704.778 kb on - strand at 1704.834 kb on + strand at 1704.836 kb on - strand at 1704.851 kb on - strand at 1704.853 kb on + strand at 1704.861 kb on - strand at 1704.863 kb on + strand at 1704.946 kb on - strand at 1704.953 kb on + strand at 1704.953 kb on + strand at 1704.986 kb on + strand at 1705.009 kb on + strand, within MPMX20_01612 at 1705.017 kb on - strand, within MPMX20_01612 at 1705.019 kb on + strand, within MPMX20_01612 at 1705.028 kb on - strand, within MPMX20_01612 at 1705.057 kb on + strand, within MPMX20_01612 at 1705.063 kb on - strand, within MPMX20_01612 at 1705.068 kb on - strand, within MPMX20_01612 at 1705.072 kb on + strand, within MPMX20_01612
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,701,098 + MPMX20_01608 0.64 +1.4 1,701,147 + MPMX20_01608 0.73 -0.2 1,701,155 - MPMX20_01608 0.74 -0.1 1,701,155 - MPMX20_01608 0.74 -0.3 1,701,172 + MPMX20_01608 0.77 -0.3 1,701,180 - MPMX20_01608 0.79 +0.2 1,701,207 + MPMX20_01608 0.84 +0.2 1,701,207 - MPMX20_01608 0.84 -2.4 1,701,221 + MPMX20_01608 0.86 +0.1 1,701,240 - MPMX20_01608 0.89 -1.3 1,701,345 + -1.3 1,701,515 - -0.7 1,701,516 - -0.5 1,701,533 + MPMX20_01609 0.11 -1.2 1,701,534 - MPMX20_01609 0.11 -0.2 1,701,541 - MPMX20_01609 0.12 -0.2 1,701,541 - MPMX20_01609 0.12 +0.1 1,701,541 - MPMX20_01609 0.12 -1.3 1,701,543 + MPMX20_01609 0.13 +1.9 1,701,551 + MPMX20_01609 0.14 -1.6 1,701,561 + MPMX20_01609 0.16 -0.1 1,701,610 + MPMX20_01609 0.23 +1.8 1,701,610 + MPMX20_01609 0.23 +0.1 1,701,612 - MPMX20_01609 0.24 +1.2 1,701,680 - MPMX20_01609 0.35 -0.2 1,701,686 + MPMX20_01609 0.36 -0.0 1,701,722 + MPMX20_01609 0.41 -1.0 1,701,740 - MPMX20_01609 0.44 -0.9 1,701,747 + MPMX20_01609 0.45 -2.0 1,701,861 + MPMX20_01609 0.63 +0.3 1,701,861 + MPMX20_01609 0.63 -0.5 1,701,961 - MPMX20_01609 0.79 +0.3 1,701,961 - MPMX20_01609 0.79 +0.6 1,701,971 + MPMX20_01609 0.81 -2.3 1,701,975 + MPMX20_01609 0.82 -0.2 1,701,983 - MPMX20_01609 0.83 -0.6 1,701,986 + MPMX20_01609 0.83 +2.5 1,701,986 + MPMX20_01609 0.83 +0.5 1,702,002 - MPMX20_01609 0.86 +0.2 1,702,011 - MPMX20_01609 0.87 +0.2 1,702,039 + -0.4 1,702,043 + -0.3 1,702,051 - -2.3 1,702,061 + -0.4 1,702,064 - +1.5 1,702,079 + +0.2 1,702,253 + -0.9 1,702,261 - -2.1 1,702,284 + MPMX20_01610 0.11 +0.4 1,702,365 + MPMX20_01610 0.15 +4.1 1,702,369 + MPMX20_01610 0.15 -0.3 1,702,423 + MPMX20_01610 0.17 +0.8 1,702,461 + MPMX20_01610 0.19 -0.1 1,702,469 + MPMX20_01610 0.20 +1.5 1,702,494 - MPMX20_01610 0.21 -2.7 1,702,517 + MPMX20_01610 0.22 -0.2 1,702,531 + MPMX20_01610 0.22 -1.6 1,702,539 - MPMX20_01610 0.23 +0.0 1,702,541 + MPMX20_01610 0.23 +1.9 1,702,557 - MPMX20_01610 0.24 -0.2 1,702,577 + MPMX20_01610 0.25 +0.5 1,702,626 - MPMX20_01610 0.27 -1.6 1,702,676 + MPMX20_01610 0.29 -0.9 1,702,676 + MPMX20_01610 0.29 -1.4 1,702,676 + MPMX20_01610 0.29 -0.1 1,702,684 - MPMX20_01610 0.29 -1.2 1,702,684 - MPMX20_01610 0.29 +0.2 1,702,684 - MPMX20_01610 0.29 +0.8 1,702,684 - MPMX20_01610 0.29 -0.3 1,702,684 - MPMX20_01610 0.29 +1.5 1,702,684 - MPMX20_01610 0.29 +2.5 1,702,684 - MPMX20_01610 0.29 -1.7 1,702,684 - MPMX20_01610 0.29 -0.1 1,702,695 - MPMX20_01610 0.30 +0.3 1,702,708 + MPMX20_01610 0.31 -1.2 1,702,708 + MPMX20_01610 0.31 -1.8 1,702,708 + MPMX20_01610 0.31 -0.1 1,702,708 + MPMX20_01610 0.31 +0.1 1,702,708 + MPMX20_01610 0.31 +0.7 1,702,708 + MPMX20_01610 0.31 -1.3 1,702,716 - MPMX20_01610 0.31 -1.9 1,702,716 - MPMX20_01610 0.31 +0.1 1,702,716 - MPMX20_01610 0.31 -0.8 1,702,773 - MPMX20_01610 0.34 -0.5 1,702,784 - MPMX20_01610 0.34 -0.9 1,702,789 - MPMX20_01610 0.34 +0.5 1,702,811 + MPMX20_01610 0.35 +0.2 1,702,814 - MPMX20_01610 0.36 +1.9 1,702,817 + MPMX20_01610 0.36 -0.5 1,702,844 - MPMX20_01610 0.37 -0.4 1,702,850 - MPMX20_01610 0.37 +0.8 1,702,891 + MPMX20_01610 0.39 -0.3 1,702,911 + MPMX20_01610 0.40 +0.7 1,702,951 - MPMX20_01610 0.42 -0.5 1,702,999 - MPMX20_01610 0.44 -0.1 1,703,006 - MPMX20_01610 0.44 +0.9 1,703,033 + MPMX20_01610 0.46 +0.3 1,703,089 - MPMX20_01610 0.48 -1.3 1,703,093 + MPMX20_01610 0.48 +0.5 1,703,101 - MPMX20_01610 0.49 +0.2 1,703,101 - MPMX20_01610 0.49 -1.1 1,703,239 + MPMX20_01610 0.55 +0.2 1,703,250 + MPMX20_01610 0.56 -1.5 1,703,366 - MPMX20_01610 0.61 +0.9 1,703,436 - MPMX20_01610 0.64 -2.9 1,703,436 - MPMX20_01610 0.64 -1.4 1,703,436 - MPMX20_01610 0.64 +0.2 1,703,466 + MPMX20_01610 0.66 -0.3 1,703,466 + MPMX20_01610 0.66 -0.4 1,703,466 + MPMX20_01610 0.66 -1.7 1,703,466 + MPMX20_01610 0.66 -0.6 1,703,466 + MPMX20_01610 0.66 -0.7 1,703,472 - MPMX20_01610 0.66 +0.3 1,703,474 - MPMX20_01610 0.66 +0.6 1,703,474 - MPMX20_01610 0.66 -1.4 1,703,474 - MPMX20_01610 0.66 +0.5 1,703,474 - MPMX20_01610 0.66 -0.8 1,703,474 - MPMX20_01610 0.66 -0.4 1,703,500 - MPMX20_01610 0.67 -0.3 1,703,540 + MPMX20_01610 0.69 -0.7 1,703,553 + MPMX20_01610 0.70 +0.7 1,703,705 + MPMX20_01610 0.77 -0.2 1,703,705 + MPMX20_01610 0.77 +1.6 1,703,705 + MPMX20_01610 0.77 +0.3 1,703,705 + MPMX20_01610 0.77 -0.6 1,703,705 + MPMX20_01610 0.77 -0.7 1,703,710 + MPMX20_01610 0.77 +0.3 1,703,713 - MPMX20_01610 0.77 -1.5 1,703,713 - MPMX20_01610 0.77 +0.3 1,703,713 - MPMX20_01610 0.77 +1.2 1,703,755 + MPMX20_01610 0.79 +1.9 1,703,755 + MPMX20_01610 0.79 -1.3 1,703,755 + MPMX20_01610 0.79 -1.4 1,703,823 - MPMX20_01610 0.82 -0.0 1,703,871 + MPMX20_01610 0.84 +0.2 1,703,879 - MPMX20_01610 0.85 -0.1 1,703,879 - MPMX20_01610 0.85 -0.3 1,703,881 + MPMX20_01610 0.85 +0.3 1,703,881 + MPMX20_01610 0.85 -0.8 1,703,889 - MPMX20_01610 0.85 -0.1 1,703,889 - MPMX20_01610 0.85 -0.7 1,703,920 + MPMX20_01610 0.87 +0.2 1,703,928 - MPMX20_01610 0.87 -1.8 1,703,928 - MPMX20_01610 0.87 +0.1 1,703,928 - MPMX20_01610 0.87 -0.9 1,703,928 - MPMX20_01610 0.87 +0.3 1,703,941 + MPMX20_01610 0.88 +1.2 1,703,941 + MPMX20_01610 0.88 -0.1 1,703,962 + MPMX20_01610 0.89 -0.7 1,703,965 - MPMX20_01610 0.89 +0.9 1,703,970 - MPMX20_01610 0.89 -0.9 1,703,970 - MPMX20_01610 0.89 +0.7 1,703,970 - MPMX20_01610 0.89 +3.1 1,704,017 - +1.5 1,704,075 - -0.5 1,704,075 - -0.8 1,704,075 - -0.5 1,704,126 + +0.2 1,704,126 + +0.6 1,704,126 + -0.8 1,704,163 + +0.5 1,704,173 + -0.3 1,704,181 - -1.0 1,704,269 + -0.4 1,704,289 + MPMX20_01611 0.14 +0.6 1,704,312 - MPMX20_01611 0.19 +1.2 1,704,372 - MPMX20_01611 0.32 -0.7 1,704,374 + MPMX20_01611 0.33 +0.3 1,704,405 - MPMX20_01611 0.40 -0.9 1,704,407 + MPMX20_01611 0.40 -2.3 1,704,415 - MPMX20_01611 0.42 -2.2 1,704,415 - MPMX20_01611 0.42 -1.1 1,704,459 + MPMX20_01611 0.52 +0.6 1,704,467 - MPMX20_01611 0.53 -0.6 1,704,508 + MPMX20_01611 0.63 +0.9 1,704,561 + MPMX20_01611 0.74 +1.9 1,704,562 + MPMX20_01611 0.75 -0.7 1,704,569 - MPMX20_01611 0.76 -1.5 1,704,570 - MPMX20_01611 0.77 -0.3 1,704,589 + MPMX20_01611 0.81 -0.1 1,704,589 + MPMX20_01611 0.81 -0.3 1,704,665 - -0.5 1,704,680 - +0.2 1,704,698 + -2.4 1,704,732 + +1.8 1,704,740 + -0.8 1,704,740 + -0.5 1,704,740 + -1.2 1,704,740 + -1.2 1,704,740 + -1.4 1,704,740 + -1.0 1,704,748 - -1.2 1,704,748 - +1.3 1,704,748 - -1.3 1,704,748 - -0.5 1,704,748 - +0.4 1,704,778 - +0.5 1,704,834 + -1.3 1,704,836 - -0.2 1,704,851 - -0.9 1,704,853 + -1.9 1,704,861 - -0.5 1,704,863 + +0.5 1,704,946 - -0.5 1,704,953 + -4.7 1,704,953 + -0.1 1,704,986 + -1.1 1,705,009 + MPMX20_01612 0.10 +0.2 1,705,017 - MPMX20_01612 0.11 +1.5 1,705,019 + MPMX20_01612 0.11 -2.9 1,705,028 - MPMX20_01612 0.11 +0.2 1,705,057 + MPMX20_01612 0.13 -0.5 1,705,063 - MPMX20_01612 0.13 +1.4 1,705,068 - MPMX20_01612 0.13 +0.9 1,705,072 + MPMX20_01612 0.13 +0.1
Or see this region's nucleotide sequence