Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01610

Experiment: 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01608 and MPMX20_01609 are separated by 163 nucleotidesMPMX20_01609 and MPMX20_01610 overlap by 44 nucleotidesMPMX20_01610 and MPMX20_01611 are separated by 19 nucleotidesMPMX20_01611 and MPMX20_01612 are separated by 123 nucleotides MPMX20_01608: MPMX20_01608 - Cell division inhibitor SulA, at 1,700,736 to 1,701,299 _01608 MPMX20_01609: MPMX20_01609 - Protein Sxy, at 1,701,463 to 1,702,089 _01609 MPMX20_01610: MPMX20_01610 - Inner membrane protein YccS, at 1,702,046 to 1,704,208 _01610 MPMX20_01611: MPMX20_01611 - Inner membrane protein YccF, at 1,704,228 to 1,704,674 _01611 MPMX20_01612: MPMX20_01612 - DNA helicase IV, at 1,704,798 to 1,706,852 _01612 Position (kb) 1702 1703 1704 1705Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1701.098 kb on + strand, within MPMX20_01608at 1701.147 kb on + strand, within MPMX20_01608at 1701.155 kb on - strand, within MPMX20_01608at 1701.155 kb on - strand, within MPMX20_01608at 1701.172 kb on + strand, within MPMX20_01608at 1701.180 kb on - strand, within MPMX20_01608at 1701.207 kb on + strand, within MPMX20_01608at 1701.207 kb on - strand, within MPMX20_01608at 1701.221 kb on + strand, within MPMX20_01608at 1701.240 kb on - strand, within MPMX20_01608at 1701.345 kb on + strandat 1701.515 kb on - strandat 1701.516 kb on - strandat 1701.533 kb on + strand, within MPMX20_01609at 1701.534 kb on - strand, within MPMX20_01609at 1701.541 kb on - strand, within MPMX20_01609at 1701.541 kb on - strand, within MPMX20_01609at 1701.541 kb on - strand, within MPMX20_01609at 1701.543 kb on + strand, within MPMX20_01609at 1701.551 kb on + strand, within MPMX20_01609at 1701.561 kb on + strand, within MPMX20_01609at 1701.610 kb on + strand, within MPMX20_01609at 1701.610 kb on + strand, within MPMX20_01609at 1701.612 kb on - strand, within MPMX20_01609at 1701.680 kb on - strand, within MPMX20_01609at 1701.686 kb on + strand, within MPMX20_01609at 1701.722 kb on + strand, within MPMX20_01609at 1701.740 kb on - strand, within MPMX20_01609at 1701.747 kb on + strand, within MPMX20_01609at 1701.861 kb on + strand, within MPMX20_01609at 1701.861 kb on + strand, within MPMX20_01609at 1701.961 kb on - strand, within MPMX20_01609at 1701.961 kb on - strand, within MPMX20_01609at 1701.971 kb on + strand, within MPMX20_01609at 1701.975 kb on + strand, within MPMX20_01609at 1701.983 kb on - strand, within MPMX20_01609at 1701.986 kb on + strand, within MPMX20_01609at 1701.986 kb on + strand, within MPMX20_01609at 1702.002 kb on - strand, within MPMX20_01609at 1702.011 kb on - strand, within MPMX20_01609at 1702.039 kb on + strandat 1702.043 kb on + strandat 1702.051 kb on - strandat 1702.061 kb on + strandat 1702.064 kb on - strandat 1702.079 kb on + strandat 1702.253 kb on + strandat 1702.261 kb on - strandat 1702.284 kb on + strand, within MPMX20_01610at 1702.365 kb on + strand, within MPMX20_01610at 1702.369 kb on + strand, within MPMX20_01610at 1702.423 kb on + strand, within MPMX20_01610at 1702.461 kb on + strand, within MPMX20_01610at 1702.469 kb on + strand, within MPMX20_01610at 1702.494 kb on - strand, within MPMX20_01610at 1702.517 kb on + strand, within MPMX20_01610at 1702.531 kb on + strand, within MPMX20_01610at 1702.539 kb on - strand, within MPMX20_01610at 1702.541 kb on + strand, within MPMX20_01610at 1702.557 kb on - strand, within MPMX20_01610at 1702.577 kb on + strand, within MPMX20_01610at 1702.626 kb on - strand, within MPMX20_01610at 1702.676 kb on + strand, within MPMX20_01610at 1702.676 kb on + strand, within MPMX20_01610at 1702.676 kb on + strand, within MPMX20_01610at 1702.684 kb on - strand, within MPMX20_01610at 1702.684 kb on - strand, within MPMX20_01610at 1702.684 kb on - strand, within MPMX20_01610at 1702.684 kb on - strand, within MPMX20_01610at 1702.684 kb on - strand, within MPMX20_01610at 1702.684 kb on - strand, within MPMX20_01610at 1702.684 kb on - strand, within MPMX20_01610at 1702.684 kb on - strand, within MPMX20_01610at 1702.695 kb on - strand, within MPMX20_01610at 1702.708 kb on + strand, within MPMX20_01610at 1702.708 kb on + strand, within MPMX20_01610at 1702.708 kb on + strand, within MPMX20_01610at 1702.708 kb on + strand, within MPMX20_01610at 1702.708 kb on + strand, within MPMX20_01610at 1702.708 kb on + strand, within MPMX20_01610at 1702.716 kb on - strand, within MPMX20_01610at 1702.716 kb on - strand, within MPMX20_01610at 1702.716 kb on - strand, within MPMX20_01610at 1702.773 kb on - strand, within MPMX20_01610at 1702.784 kb on - strand, within MPMX20_01610at 1702.789 kb on - strand, within MPMX20_01610at 1702.811 kb on + strand, within MPMX20_01610at 1702.814 kb on - strand, within MPMX20_01610at 1702.817 kb on + strand, within MPMX20_01610at 1702.844 kb on - strand, within MPMX20_01610at 1702.850 kb on - strand, within MPMX20_01610at 1702.891 kb on + strand, within MPMX20_01610at 1702.911 kb on + strand, within MPMX20_01610at 1702.951 kb on - strand, within MPMX20_01610at 1702.999 kb on - strand, within MPMX20_01610at 1703.006 kb on - strand, within MPMX20_01610at 1703.033 kb on + strand, within MPMX20_01610at 1703.089 kb on - strand, within MPMX20_01610at 1703.093 kb on + strand, within MPMX20_01610at 1703.101 kb on - strand, within MPMX20_01610at 1703.101 kb on - strand, within MPMX20_01610at 1703.239 kb on + strand, within MPMX20_01610at 1703.250 kb on + strand, within MPMX20_01610at 1703.366 kb on - strand, within MPMX20_01610at 1703.436 kb on - strand, within MPMX20_01610at 1703.436 kb on - strand, within MPMX20_01610at 1703.436 kb on - strand, within MPMX20_01610at 1703.466 kb on + strand, within MPMX20_01610at 1703.466 kb on + strand, within MPMX20_01610at 1703.466 kb on + strand, within MPMX20_01610at 1703.466 kb on + strand, within MPMX20_01610at 1703.466 kb on + strand, within MPMX20_01610at 1703.472 kb on - strand, within MPMX20_01610at 1703.474 kb on - strand, within MPMX20_01610at 1703.474 kb on - strand, within MPMX20_01610at 1703.474 kb on - strand, within MPMX20_01610at 1703.474 kb on - strand, within MPMX20_01610at 1703.474 kb on - strand, within MPMX20_01610at 1703.500 kb on - strand, within MPMX20_01610at 1703.540 kb on + strand, within MPMX20_01610at 1703.553 kb on + strand, within MPMX20_01610at 1703.705 kb on + strand, within MPMX20_01610at 1703.705 kb on + strand, within MPMX20_01610at 1703.705 kb on + strand, within MPMX20_01610at 1703.705 kb on + strand, within MPMX20_01610at 1703.705 kb on + strand, within MPMX20_01610at 1703.710 kb on + strand, within MPMX20_01610at 1703.713 kb on - strand, within MPMX20_01610at 1703.713 kb on - strand, within MPMX20_01610at 1703.713 kb on - strand, within MPMX20_01610at 1703.755 kb on + strand, within MPMX20_01610at 1703.755 kb on + strand, within MPMX20_01610at 1703.755 kb on + strand, within MPMX20_01610at 1703.823 kb on - strand, within MPMX20_01610at 1703.871 kb on + strand, within MPMX20_01610at 1703.879 kb on - strand, within MPMX20_01610at 1703.879 kb on - strand, within MPMX20_01610at 1703.881 kb on + strand, within MPMX20_01610at 1703.881 kb on + strand, within MPMX20_01610at 1703.889 kb on - strand, within MPMX20_01610at 1703.889 kb on - strand, within MPMX20_01610at 1703.920 kb on + strand, within MPMX20_01610at 1703.928 kb on - strand, within MPMX20_01610at 1703.928 kb on - strand, within MPMX20_01610at 1703.928 kb on - strand, within MPMX20_01610at 1703.928 kb on - strand, within MPMX20_01610at 1703.941 kb on + strand, within MPMX20_01610at 1703.941 kb on + strand, within MPMX20_01610at 1703.962 kb on + strand, within MPMX20_01610at 1703.965 kb on - strand, within MPMX20_01610at 1703.970 kb on - strand, within MPMX20_01610at 1703.970 kb on - strand, within MPMX20_01610at 1703.970 kb on - strand, within MPMX20_01610at 1704.017 kb on - strandat 1704.075 kb on - strandat 1704.075 kb on - strandat 1704.075 kb on - strandat 1704.126 kb on + strandat 1704.126 kb on + strandat 1704.126 kb on + strandat 1704.163 kb on + strandat 1704.173 kb on + strandat 1704.181 kb on - strandat 1704.269 kb on + strandat 1704.289 kb on + strand, within MPMX20_01611at 1704.312 kb on - strand, within MPMX20_01611at 1704.372 kb on - strand, within MPMX20_01611at 1704.374 kb on + strand, within MPMX20_01611at 1704.405 kb on - strand, within MPMX20_01611at 1704.407 kb on + strand, within MPMX20_01611at 1704.415 kb on - strand, within MPMX20_01611at 1704.415 kb on - strand, within MPMX20_01611at 1704.459 kb on + strand, within MPMX20_01611at 1704.467 kb on - strand, within MPMX20_01611at 1704.508 kb on + strand, within MPMX20_01611at 1704.561 kb on + strand, within MPMX20_01611at 1704.562 kb on + strand, within MPMX20_01611at 1704.569 kb on - strand, within MPMX20_01611at 1704.570 kb on - strand, within MPMX20_01611at 1704.589 kb on + strand, within MPMX20_01611at 1704.589 kb on + strand, within MPMX20_01611at 1704.665 kb on - strandat 1704.680 kb on - strandat 1704.698 kb on + strandat 1704.732 kb on + strandat 1704.740 kb on + strandat 1704.740 kb on + strandat 1704.740 kb on + strandat 1704.740 kb on + strandat 1704.740 kb on + strandat 1704.740 kb on + strandat 1704.748 kb on - strandat 1704.748 kb on - strandat 1704.748 kb on - strandat 1704.748 kb on - strandat 1704.748 kb on - strandat 1704.778 kb on - strandat 1704.834 kb on + strandat 1704.836 kb on - strandat 1704.851 kb on - strandat 1704.853 kb on + strandat 1704.861 kb on - strandat 1704.863 kb on + strandat 1704.946 kb on - strandat 1704.953 kb on + strandat 1704.953 kb on + strandat 1704.986 kb on + strandat 1705.009 kb on + strand, within MPMX20_01612at 1705.017 kb on - strand, within MPMX20_01612at 1705.019 kb on + strand, within MPMX20_01612at 1705.028 kb on - strand, within MPMX20_01612at 1705.057 kb on + strand, within MPMX20_01612at 1705.063 kb on - strand, within MPMX20_01612at 1705.068 kb on - strand, within MPMX20_01612at 1705.072 kb on + strand, within MPMX20_01612

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,701,098 + MPMX20_01608 0.64 +1.4
1,701,147 + MPMX20_01608 0.73 -0.2
1,701,155 - MPMX20_01608 0.74 -0.1
1,701,155 - MPMX20_01608 0.74 -0.3
1,701,172 + MPMX20_01608 0.77 -0.3
1,701,180 - MPMX20_01608 0.79 +0.2
1,701,207 + MPMX20_01608 0.84 +0.2
1,701,207 - MPMX20_01608 0.84 -2.4
1,701,221 + MPMX20_01608 0.86 +0.1
1,701,240 - MPMX20_01608 0.89 -1.3
1,701,345 + -1.3
1,701,515 - -0.7
1,701,516 - -0.5
1,701,533 + MPMX20_01609 0.11 -1.2
1,701,534 - MPMX20_01609 0.11 -0.2
1,701,541 - MPMX20_01609 0.12 -0.2
1,701,541 - MPMX20_01609 0.12 +0.1
1,701,541 - MPMX20_01609 0.12 -1.3
1,701,543 + MPMX20_01609 0.13 +1.9
1,701,551 + MPMX20_01609 0.14 -1.6
1,701,561 + MPMX20_01609 0.16 -0.1
1,701,610 + MPMX20_01609 0.23 +1.8
1,701,610 + MPMX20_01609 0.23 +0.1
1,701,612 - MPMX20_01609 0.24 +1.2
1,701,680 - MPMX20_01609 0.35 -0.2
1,701,686 + MPMX20_01609 0.36 -0.0
1,701,722 + MPMX20_01609 0.41 -1.0
1,701,740 - MPMX20_01609 0.44 -0.9
1,701,747 + MPMX20_01609 0.45 -2.0
1,701,861 + MPMX20_01609 0.63 +0.3
1,701,861 + MPMX20_01609 0.63 -0.5
1,701,961 - MPMX20_01609 0.79 +0.3
1,701,961 - MPMX20_01609 0.79 +0.6
1,701,971 + MPMX20_01609 0.81 -2.3
1,701,975 + MPMX20_01609 0.82 -0.2
1,701,983 - MPMX20_01609 0.83 -0.6
1,701,986 + MPMX20_01609 0.83 +2.5
1,701,986 + MPMX20_01609 0.83 +0.5
1,702,002 - MPMX20_01609 0.86 +0.2
1,702,011 - MPMX20_01609 0.87 +0.2
1,702,039 + -0.4
1,702,043 + -0.3
1,702,051 - -2.3
1,702,061 + -0.4
1,702,064 - +1.5
1,702,079 + +0.2
1,702,253 + -0.9
1,702,261 - -2.1
1,702,284 + MPMX20_01610 0.11 +0.4
1,702,365 + MPMX20_01610 0.15 +4.1
1,702,369 + MPMX20_01610 0.15 -0.3
1,702,423 + MPMX20_01610 0.17 +0.8
1,702,461 + MPMX20_01610 0.19 -0.1
1,702,469 + MPMX20_01610 0.20 +1.5
1,702,494 - MPMX20_01610 0.21 -2.7
1,702,517 + MPMX20_01610 0.22 -0.2
1,702,531 + MPMX20_01610 0.22 -1.6
1,702,539 - MPMX20_01610 0.23 +0.0
1,702,541 + MPMX20_01610 0.23 +1.9
1,702,557 - MPMX20_01610 0.24 -0.2
1,702,577 + MPMX20_01610 0.25 +0.5
1,702,626 - MPMX20_01610 0.27 -1.6
1,702,676 + MPMX20_01610 0.29 -0.9
1,702,676 + MPMX20_01610 0.29 -1.4
1,702,676 + MPMX20_01610 0.29 -0.1
1,702,684 - MPMX20_01610 0.29 -1.2
1,702,684 - MPMX20_01610 0.29 +0.2
1,702,684 - MPMX20_01610 0.29 +0.8
1,702,684 - MPMX20_01610 0.29 -0.3
1,702,684 - MPMX20_01610 0.29 +1.5
1,702,684 - MPMX20_01610 0.29 +2.5
1,702,684 - MPMX20_01610 0.29 -1.7
1,702,684 - MPMX20_01610 0.29 -0.1
1,702,695 - MPMX20_01610 0.30 +0.3
1,702,708 + MPMX20_01610 0.31 -1.2
1,702,708 + MPMX20_01610 0.31 -1.8
1,702,708 + MPMX20_01610 0.31 -0.1
1,702,708 + MPMX20_01610 0.31 +0.1
1,702,708 + MPMX20_01610 0.31 +0.7
1,702,708 + MPMX20_01610 0.31 -1.3
1,702,716 - MPMX20_01610 0.31 -1.9
1,702,716 - MPMX20_01610 0.31 +0.1
1,702,716 - MPMX20_01610 0.31 -0.8
1,702,773 - MPMX20_01610 0.34 -0.5
1,702,784 - MPMX20_01610 0.34 -0.9
1,702,789 - MPMX20_01610 0.34 +0.5
1,702,811 + MPMX20_01610 0.35 +0.2
1,702,814 - MPMX20_01610 0.36 +1.9
1,702,817 + MPMX20_01610 0.36 -0.5
1,702,844 - MPMX20_01610 0.37 -0.4
1,702,850 - MPMX20_01610 0.37 +0.8
1,702,891 + MPMX20_01610 0.39 -0.3
1,702,911 + MPMX20_01610 0.40 +0.7
1,702,951 - MPMX20_01610 0.42 -0.5
1,702,999 - MPMX20_01610 0.44 -0.1
1,703,006 - MPMX20_01610 0.44 +0.9
1,703,033 + MPMX20_01610 0.46 +0.3
1,703,089 - MPMX20_01610 0.48 -1.3
1,703,093 + MPMX20_01610 0.48 +0.5
1,703,101 - MPMX20_01610 0.49 +0.2
1,703,101 - MPMX20_01610 0.49 -1.1
1,703,239 + MPMX20_01610 0.55 +0.2
1,703,250 + MPMX20_01610 0.56 -1.5
1,703,366 - MPMX20_01610 0.61 +0.9
1,703,436 - MPMX20_01610 0.64 -2.9
1,703,436 - MPMX20_01610 0.64 -1.4
1,703,436 - MPMX20_01610 0.64 +0.2
1,703,466 + MPMX20_01610 0.66 -0.3
1,703,466 + MPMX20_01610 0.66 -0.4
1,703,466 + MPMX20_01610 0.66 -1.7
1,703,466 + MPMX20_01610 0.66 -0.6
1,703,466 + MPMX20_01610 0.66 -0.7
1,703,472 - MPMX20_01610 0.66 +0.3
1,703,474 - MPMX20_01610 0.66 +0.6
1,703,474 - MPMX20_01610 0.66 -1.4
1,703,474 - MPMX20_01610 0.66 +0.5
1,703,474 - MPMX20_01610 0.66 -0.8
1,703,474 - MPMX20_01610 0.66 -0.4
1,703,500 - MPMX20_01610 0.67 -0.3
1,703,540 + MPMX20_01610 0.69 -0.7
1,703,553 + MPMX20_01610 0.70 +0.7
1,703,705 + MPMX20_01610 0.77 -0.2
1,703,705 + MPMX20_01610 0.77 +1.6
1,703,705 + MPMX20_01610 0.77 +0.3
1,703,705 + MPMX20_01610 0.77 -0.6
1,703,705 + MPMX20_01610 0.77 -0.7
1,703,710 + MPMX20_01610 0.77 +0.3
1,703,713 - MPMX20_01610 0.77 -1.5
1,703,713 - MPMX20_01610 0.77 +0.3
1,703,713 - MPMX20_01610 0.77 +1.2
1,703,755 + MPMX20_01610 0.79 +1.9
1,703,755 + MPMX20_01610 0.79 -1.3
1,703,755 + MPMX20_01610 0.79 -1.4
1,703,823 - MPMX20_01610 0.82 -0.0
1,703,871 + MPMX20_01610 0.84 +0.2
1,703,879 - MPMX20_01610 0.85 -0.1
1,703,879 - MPMX20_01610 0.85 -0.3
1,703,881 + MPMX20_01610 0.85 +0.3
1,703,881 + MPMX20_01610 0.85 -0.8
1,703,889 - MPMX20_01610 0.85 -0.1
1,703,889 - MPMX20_01610 0.85 -0.7
1,703,920 + MPMX20_01610 0.87 +0.2
1,703,928 - MPMX20_01610 0.87 -1.8
1,703,928 - MPMX20_01610 0.87 +0.1
1,703,928 - MPMX20_01610 0.87 -0.9
1,703,928 - MPMX20_01610 0.87 +0.3
1,703,941 + MPMX20_01610 0.88 +1.2
1,703,941 + MPMX20_01610 0.88 -0.1
1,703,962 + MPMX20_01610 0.89 -0.7
1,703,965 - MPMX20_01610 0.89 +0.9
1,703,970 - MPMX20_01610 0.89 -0.9
1,703,970 - MPMX20_01610 0.89 +0.7
1,703,970 - MPMX20_01610 0.89 +3.1
1,704,017 - +1.5
1,704,075 - -0.5
1,704,075 - -0.8
1,704,075 - -0.5
1,704,126 + +0.2
1,704,126 + +0.6
1,704,126 + -0.8
1,704,163 + +0.5
1,704,173 + -0.3
1,704,181 - -1.0
1,704,269 + -0.4
1,704,289 + MPMX20_01611 0.14 +0.6
1,704,312 - MPMX20_01611 0.19 +1.2
1,704,372 - MPMX20_01611 0.32 -0.7
1,704,374 + MPMX20_01611 0.33 +0.3
1,704,405 - MPMX20_01611 0.40 -0.9
1,704,407 + MPMX20_01611 0.40 -2.3
1,704,415 - MPMX20_01611 0.42 -2.2
1,704,415 - MPMX20_01611 0.42 -1.1
1,704,459 + MPMX20_01611 0.52 +0.6
1,704,467 - MPMX20_01611 0.53 -0.6
1,704,508 + MPMX20_01611 0.63 +0.9
1,704,561 + MPMX20_01611 0.74 +1.9
1,704,562 + MPMX20_01611 0.75 -0.7
1,704,569 - MPMX20_01611 0.76 -1.5
1,704,570 - MPMX20_01611 0.77 -0.3
1,704,589 + MPMX20_01611 0.81 -0.1
1,704,589 + MPMX20_01611 0.81 -0.3
1,704,665 - -0.5
1,704,680 - +0.2
1,704,698 + -2.4
1,704,732 + +1.8
1,704,740 + -0.8
1,704,740 + -0.5
1,704,740 + -1.2
1,704,740 + -1.2
1,704,740 + -1.4
1,704,740 + -1.0
1,704,748 - -1.2
1,704,748 - +1.3
1,704,748 - -1.3
1,704,748 - -0.5
1,704,748 - +0.4
1,704,778 - +0.5
1,704,834 + -1.3
1,704,836 - -0.2
1,704,851 - -0.9
1,704,853 + -1.9
1,704,861 - -0.5
1,704,863 + +0.5
1,704,946 - -0.5
1,704,953 + -4.7
1,704,953 + -0.1
1,704,986 + -1.1
1,705,009 + MPMX20_01612 0.10 +0.2
1,705,017 - MPMX20_01612 0.11 +1.5
1,705,019 + MPMX20_01612 0.11 -2.9
1,705,028 - MPMX20_01612 0.11 +0.2
1,705,057 + MPMX20_01612 0.13 -0.5
1,705,063 - MPMX20_01612 0.13 +1.4
1,705,068 - MPMX20_01612 0.13 +0.9
1,705,072 + MPMX20_01612 0.13 +0.1

Or see this region's nucleotide sequence