Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03739 and MPMX20_03740 are separated by 23 nucleotides MPMX20_03740 and MPMX20_03741 are separated by 41 nucleotides MPMX20_03741 and MPMX20_03742 overlap by 4 nucleotides
MPMX20_03739: MPMX20_03739 - Lichenan permease IIC component, at 3,942,691 to 3,944,013
_03739
MPMX20_03740: MPMX20_03740 - PTS system N,N'-diacetylchitobiose-specific EIIA component, at 3,944,037 to 3,944,345
_03740
MPMX20_03741: MPMX20_03741 - Fructokinase, at 3,944,387 to 3,945,292
_03741
MPMX20_03742: MPMX20_03742 - HTH-type transcriptional regulator GalR, at 3,945,289 to 3,946,329
_03742
Position (kb)
3944
3945
3946 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3943.401 kb on - strand, within MPMX20_03739 at 3943.408 kb on + strand, within MPMX20_03739 at 3943.408 kb on + strand, within MPMX20_03739 at 3943.472 kb on - strand, within MPMX20_03739 at 3943.479 kb on + strand, within MPMX20_03739 at 3943.527 kb on + strand, within MPMX20_03739 at 3943.577 kb on + strand, within MPMX20_03739 at 3943.585 kb on - strand, within MPMX20_03739 at 3943.649 kb on - strand, within MPMX20_03739 at 3943.750 kb on + strand, within MPMX20_03739 at 3943.757 kb on - strand, within MPMX20_03739 at 3943.786 kb on + strand, within MPMX20_03739 at 3943.791 kb on + strand, within MPMX20_03739 at 3943.808 kb on + strand, within MPMX20_03739 at 3943.816 kb on - strand, within MPMX20_03739 at 3943.912 kb on + strand at 3943.912 kb on - strand at 3943.994 kb on + strand at 3944.008 kb on + strand at 3944.022 kb on + strand at 3944.030 kb on - strand at 3944.054 kb on + strand at 3944.084 kb on + strand, within MPMX20_03740 at 3944.092 kb on - strand, within MPMX20_03740 at 3944.100 kb on - strand, within MPMX20_03740 at 3944.106 kb on - strand, within MPMX20_03740 at 3944.176 kb on + strand, within MPMX20_03740 at 3944.207 kb on + strand, within MPMX20_03740 at 3944.231 kb on - strand, within MPMX20_03740 at 3944.267 kb on + strand, within MPMX20_03740 at 3944.289 kb on - strand, within MPMX20_03740 at 3944.324 kb on + strand at 3944.324 kb on + strand at 3944.334 kb on + strand at 3944.339 kb on + strand at 3944.346 kb on + strand at 3944.346 kb on + strand at 3944.354 kb on - strand at 3944.372 kb on - strand at 3944.392 kb on - strand at 3944.394 kb on + strand at 3944.400 kb on + strand at 3944.458 kb on + strand at 3944.466 kb on - strand at 3944.466 kb on - strand at 3944.504 kb on + strand, within MPMX20_03741 at 3944.555 kb on + strand, within MPMX20_03741 at 3944.636 kb on - strand, within MPMX20_03741 at 3944.636 kb on - strand, within MPMX20_03741 at 3944.712 kb on + strand, within MPMX20_03741 at 3944.712 kb on + strand, within MPMX20_03741 at 3944.712 kb on + strand, within MPMX20_03741 at 3944.712 kb on + strand, within MPMX20_03741 at 3944.720 kb on - strand, within MPMX20_03741 at 3944.720 kb on - strand, within MPMX20_03741 at 3944.817 kb on - strand, within MPMX20_03741 at 3944.821 kb on + strand, within MPMX20_03741 at 3944.863 kb on + strand, within MPMX20_03741 at 3944.895 kb on + strand, within MPMX20_03741 at 3944.900 kb on + strand, within MPMX20_03741 at 3944.900 kb on + strand, within MPMX20_03741 at 3944.903 kb on - strand, within MPMX20_03741 at 3944.903 kb on - strand, within MPMX20_03741 at 3944.903 kb on - strand, within MPMX20_03741 at 3944.921 kb on + strand, within MPMX20_03741 at 3945.014 kb on + strand, within MPMX20_03741 at 3945.045 kb on + strand, within MPMX20_03741 at 3945.122 kb on + strand, within MPMX20_03741 at 3945.148 kb on + strand, within MPMX20_03741 at 3945.148 kb on + strand, within MPMX20_03741 at 3945.156 kb on - strand, within MPMX20_03741 at 3945.156 kb on - strand, within MPMX20_03741 at 3945.187 kb on - strand, within MPMX20_03741 at 3945.187 kb on - strand, within MPMX20_03741 at 3945.245 kb on - strand at 3945.255 kb on - strand at 3945.281 kb on + strand at 3945.485 kb on + strand, within MPMX20_03742 at 3945.485 kb on + strand, within MPMX20_03742 at 3945.495 kb on - strand, within MPMX20_03742 at 3945.559 kb on - strand, within MPMX20_03742 at 3945.559 kb on - strand, within MPMX20_03742 at 3945.564 kb on - strand, within MPMX20_03742 at 3945.564 kb on - strand, within MPMX20_03742 at 3945.577 kb on + strand, within MPMX20_03742 at 3945.584 kb on - strand, within MPMX20_03742 at 3945.585 kb on - strand, within MPMX20_03742 at 3945.612 kb on + strand, within MPMX20_03742 at 3945.620 kb on - strand, within MPMX20_03742 at 3945.620 kb on - strand, within MPMX20_03742 at 3945.694 kb on - strand, within MPMX20_03742 at 3945.716 kb on - strand, within MPMX20_03742 at 3945.718 kb on + strand, within MPMX20_03742 at 3945.776 kb on + strand, within MPMX20_03742 at 3945.937 kb on + strand, within MPMX20_03742 at 3945.942 kb on + strand, within MPMX20_03742 at 3945.955 kb on - strand, within MPMX20_03742 at 3946.025 kb on - strand, within MPMX20_03742 at 3946.164 kb on + strand, within MPMX20_03742 at 3946.164 kb on + strand, within MPMX20_03742 at 3946.172 kb on - strand, within MPMX20_03742 at 3946.172 kb on - strand, within MPMX20_03742 at 3946.172 kb on - strand, within MPMX20_03742 at 3946.177 kb on - strand, within MPMX20_03742 at 3946.177 kb on - strand, within MPMX20_03742 at 3946.182 kb on - strand, within MPMX20_03742 at 3946.265 kb on + strand at 3946.265 kb on + strand at 3946.265 kb on + strand at 3946.265 kb on + strand at 3946.265 kb on + strand at 3946.265 kb on + strand at 3946.265 kb on + strand at 3946.265 kb on + strand at 3946.266 kb on - strand at 3946.270 kb on + strand at 3946.273 kb on - strand at 3946.273 kb on - strand at 3946.273 kb on - strand at 3946.273 kb on - strand at 3946.273 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,943,401 - MPMX20_03739 0.54 +0.9 3,943,408 + MPMX20_03739 0.54 -0.4 3,943,408 + MPMX20_03739 0.54 +0.5 3,943,472 - MPMX20_03739 0.59 -1.0 3,943,479 + MPMX20_03739 0.60 -0.3 3,943,527 + MPMX20_03739 0.63 -1.3 3,943,577 + MPMX20_03739 0.67 +0.8 3,943,585 - MPMX20_03739 0.68 +1.3 3,943,649 - MPMX20_03739 0.72 +0.1 3,943,750 + MPMX20_03739 0.80 +0.5 3,943,757 - MPMX20_03739 0.81 +0.4 3,943,786 + MPMX20_03739 0.83 +1.8 3,943,791 + MPMX20_03739 0.83 -0.5 3,943,808 + MPMX20_03739 0.84 +1.1 3,943,816 - MPMX20_03739 0.85 +0.2 3,943,912 + -0.2 3,943,912 - +1.6 3,943,994 + +0.2 3,944,008 + +0.5 3,944,022 + -0.7 3,944,030 - -0.8 3,944,054 + -0.6 3,944,084 + MPMX20_03740 0.15 +1.8 3,944,092 - MPMX20_03740 0.18 +0.0 3,944,100 - MPMX20_03740 0.20 +1.4 3,944,106 - MPMX20_03740 0.22 +0.1 3,944,176 + MPMX20_03740 0.45 +3.7 3,944,207 + MPMX20_03740 0.55 +1.4 3,944,231 - MPMX20_03740 0.63 +1.2 3,944,267 + MPMX20_03740 0.74 -0.1 3,944,289 - MPMX20_03740 0.82 +1.0 3,944,324 + +1.2 3,944,324 + +0.5 3,944,334 + -1.4 3,944,339 + +0.9 3,944,346 + -0.2 3,944,346 + -0.4 3,944,354 - -0.8 3,944,372 - +0.4 3,944,392 - -0.2 3,944,394 + +0.8 3,944,400 + +0.2 3,944,458 + -1.5 3,944,466 - +0.3 3,944,466 - +1.2 3,944,504 + MPMX20_03741 0.13 +0.2 3,944,555 + MPMX20_03741 0.19 -0.1 3,944,636 - MPMX20_03741 0.27 -0.0 3,944,636 - MPMX20_03741 0.27 -0.2 3,944,712 + MPMX20_03741 0.36 +1.5 3,944,712 + MPMX20_03741 0.36 -0.7 3,944,712 + MPMX20_03741 0.36 -0.3 3,944,712 + MPMX20_03741 0.36 +1.2 3,944,720 - MPMX20_03741 0.37 +0.1 3,944,720 - MPMX20_03741 0.37 +1.2 3,944,817 - MPMX20_03741 0.47 +0.3 3,944,821 + MPMX20_03741 0.48 -1.9 3,944,863 + MPMX20_03741 0.53 -0.4 3,944,895 + MPMX20_03741 0.56 +1.8 3,944,900 + MPMX20_03741 0.57 +0.1 3,944,900 + MPMX20_03741 0.57 +0.4 3,944,903 - MPMX20_03741 0.57 +0.6 3,944,903 - MPMX20_03741 0.57 -1.0 3,944,903 - MPMX20_03741 0.57 -0.1 3,944,921 + MPMX20_03741 0.59 +1.8 3,945,014 + MPMX20_03741 0.69 +1.2 3,945,045 + MPMX20_03741 0.73 +1.2 3,945,122 + MPMX20_03741 0.81 +0.4 3,945,148 + MPMX20_03741 0.84 +0.8 3,945,148 + MPMX20_03741 0.84 -0.2 3,945,156 - MPMX20_03741 0.85 +0.2 3,945,156 - MPMX20_03741 0.85 +1.4 3,945,187 - MPMX20_03741 0.88 -1.4 3,945,187 - MPMX20_03741 0.88 +1.2 3,945,245 - -0.2 3,945,255 - +0.8 3,945,281 + -1.0 3,945,485 + MPMX20_03742 0.19 -1.5 3,945,485 + MPMX20_03742 0.19 -1.9 3,945,495 - MPMX20_03742 0.20 -0.5 3,945,559 - MPMX20_03742 0.26 +0.8 3,945,559 - MPMX20_03742 0.26 +0.8 3,945,564 - MPMX20_03742 0.26 -2.0 3,945,564 - MPMX20_03742 0.26 -0.2 3,945,577 + MPMX20_03742 0.28 -0.5 3,945,584 - MPMX20_03742 0.28 -0.5 3,945,585 - MPMX20_03742 0.28 -2.4 3,945,612 + MPMX20_03742 0.31 -0.8 3,945,620 - MPMX20_03742 0.32 -0.8 3,945,620 - MPMX20_03742 0.32 +0.2 3,945,694 - MPMX20_03742 0.39 -2.0 3,945,716 - MPMX20_03742 0.41 +1.8 3,945,718 + MPMX20_03742 0.41 +0.2 3,945,776 + MPMX20_03742 0.47 -2.0 3,945,937 + MPMX20_03742 0.62 -2.7 3,945,942 + MPMX20_03742 0.63 -1.7 3,945,955 - MPMX20_03742 0.64 -2.1 3,946,025 - MPMX20_03742 0.71 -0.7 3,946,164 + MPMX20_03742 0.84 -0.8 3,946,164 + MPMX20_03742 0.84 -2.3 3,946,172 - MPMX20_03742 0.85 -1.5 3,946,172 - MPMX20_03742 0.85 -1.7 3,946,172 - MPMX20_03742 0.85 -1.0 3,946,177 - MPMX20_03742 0.85 -1.5 3,946,177 - MPMX20_03742 0.85 -2.5 3,946,182 - MPMX20_03742 0.86 -0.8 3,946,265 + -3.0 3,946,265 + +1.8 3,946,265 + -1.0 3,946,265 + -2.0 3,946,265 + -1.7 3,946,265 + +1.8 3,946,265 + +0.8 3,946,265 + -0.8 3,946,266 - +0.2 3,946,270 + -2.6 3,946,273 - -2.0 3,946,273 - +0.2 3,946,273 - -0.1 3,946,273 - -0.2 3,946,273 - +0.8
Or see this region's nucleotide sequence