Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03741

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03739 and MPMX20_03740 are separated by 23 nucleotidesMPMX20_03740 and MPMX20_03741 are separated by 41 nucleotidesMPMX20_03741 and MPMX20_03742 overlap by 4 nucleotides MPMX20_03739: MPMX20_03739 - Lichenan permease IIC component, at 3,942,691 to 3,944,013 _03739 MPMX20_03740: MPMX20_03740 - PTS system N,N'-diacetylchitobiose-specific EIIA component, at 3,944,037 to 3,944,345 _03740 MPMX20_03741: MPMX20_03741 - Fructokinase, at 3,944,387 to 3,945,292 _03741 MPMX20_03742: MPMX20_03742 - HTH-type transcriptional regulator GalR, at 3,945,289 to 3,946,329 _03742 Position (kb) 3944 3945 3946Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3943.401 kb on - strand, within MPMX20_03739at 3943.408 kb on + strand, within MPMX20_03739at 3943.408 kb on + strand, within MPMX20_03739at 3943.472 kb on - strand, within MPMX20_03739at 3943.479 kb on + strand, within MPMX20_03739at 3943.527 kb on + strand, within MPMX20_03739at 3943.577 kb on + strand, within MPMX20_03739at 3943.585 kb on - strand, within MPMX20_03739at 3943.649 kb on - strand, within MPMX20_03739at 3943.750 kb on + strand, within MPMX20_03739at 3943.757 kb on - strand, within MPMX20_03739at 3943.786 kb on + strand, within MPMX20_03739at 3943.791 kb on + strand, within MPMX20_03739at 3943.808 kb on + strand, within MPMX20_03739at 3943.816 kb on - strand, within MPMX20_03739at 3943.912 kb on + strandat 3943.912 kb on - strandat 3943.994 kb on + strandat 3944.008 kb on + strandat 3944.022 kb on + strandat 3944.030 kb on - strandat 3944.054 kb on + strandat 3944.084 kb on + strand, within MPMX20_03740at 3944.092 kb on - strand, within MPMX20_03740at 3944.100 kb on - strand, within MPMX20_03740at 3944.106 kb on - strand, within MPMX20_03740at 3944.176 kb on + strand, within MPMX20_03740at 3944.207 kb on + strand, within MPMX20_03740at 3944.231 kb on - strand, within MPMX20_03740at 3944.267 kb on + strand, within MPMX20_03740at 3944.289 kb on - strand, within MPMX20_03740at 3944.324 kb on + strandat 3944.324 kb on + strandat 3944.334 kb on + strandat 3944.339 kb on + strandat 3944.346 kb on + strandat 3944.346 kb on + strandat 3944.354 kb on - strandat 3944.372 kb on - strandat 3944.392 kb on - strandat 3944.394 kb on + strandat 3944.400 kb on + strandat 3944.458 kb on + strandat 3944.466 kb on - strandat 3944.466 kb on - strandat 3944.504 kb on + strand, within MPMX20_03741at 3944.555 kb on + strand, within MPMX20_03741at 3944.636 kb on - strand, within MPMX20_03741at 3944.636 kb on - strand, within MPMX20_03741at 3944.712 kb on + strand, within MPMX20_03741at 3944.712 kb on + strand, within MPMX20_03741at 3944.712 kb on + strand, within MPMX20_03741at 3944.712 kb on + strand, within MPMX20_03741at 3944.720 kb on - strand, within MPMX20_03741at 3944.720 kb on - strand, within MPMX20_03741at 3944.817 kb on - strand, within MPMX20_03741at 3944.821 kb on + strand, within MPMX20_03741at 3944.863 kb on + strand, within MPMX20_03741at 3944.895 kb on + strand, within MPMX20_03741at 3944.900 kb on + strand, within MPMX20_03741at 3944.900 kb on + strand, within MPMX20_03741at 3944.903 kb on - strand, within MPMX20_03741at 3944.903 kb on - strand, within MPMX20_03741at 3944.903 kb on - strand, within MPMX20_03741at 3944.921 kb on + strand, within MPMX20_03741at 3945.014 kb on + strand, within MPMX20_03741at 3945.045 kb on + strand, within MPMX20_03741at 3945.122 kb on + strand, within MPMX20_03741at 3945.148 kb on + strand, within MPMX20_03741at 3945.148 kb on + strand, within MPMX20_03741at 3945.156 kb on - strand, within MPMX20_03741at 3945.156 kb on - strand, within MPMX20_03741at 3945.187 kb on - strand, within MPMX20_03741at 3945.187 kb on - strand, within MPMX20_03741at 3945.245 kb on - strandat 3945.255 kb on - strandat 3945.281 kb on + strandat 3945.485 kb on + strand, within MPMX20_03742at 3945.485 kb on + strand, within MPMX20_03742at 3945.495 kb on - strand, within MPMX20_03742at 3945.559 kb on - strand, within MPMX20_03742at 3945.559 kb on - strand, within MPMX20_03742at 3945.564 kb on - strand, within MPMX20_03742at 3945.564 kb on - strand, within MPMX20_03742at 3945.577 kb on + strand, within MPMX20_03742at 3945.584 kb on - strand, within MPMX20_03742at 3945.585 kb on - strand, within MPMX20_03742at 3945.612 kb on + strand, within MPMX20_03742at 3945.620 kb on - strand, within MPMX20_03742at 3945.620 kb on - strand, within MPMX20_03742at 3945.694 kb on - strand, within MPMX20_03742at 3945.716 kb on - strand, within MPMX20_03742at 3945.718 kb on + strand, within MPMX20_03742at 3945.776 kb on + strand, within MPMX20_03742at 3945.937 kb on + strand, within MPMX20_03742at 3945.942 kb on + strand, within MPMX20_03742at 3945.955 kb on - strand, within MPMX20_03742at 3946.025 kb on - strand, within MPMX20_03742at 3946.164 kb on + strand, within MPMX20_03742at 3946.164 kb on + strand, within MPMX20_03742at 3946.172 kb on - strand, within MPMX20_03742at 3946.172 kb on - strand, within MPMX20_03742at 3946.172 kb on - strand, within MPMX20_03742at 3946.177 kb on - strand, within MPMX20_03742at 3946.177 kb on - strand, within MPMX20_03742at 3946.182 kb on - strand, within MPMX20_03742at 3946.265 kb on + strandat 3946.265 kb on + strandat 3946.265 kb on + strandat 3946.265 kb on + strandat 3946.265 kb on + strandat 3946.265 kb on + strandat 3946.265 kb on + strandat 3946.265 kb on + strandat 3946.266 kb on - strandat 3946.270 kb on + strandat 3946.273 kb on - strandat 3946.273 kb on - strandat 3946.273 kb on - strandat 3946.273 kb on - strandat 3946.273 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,943,401 - MPMX20_03739 0.54 +0.9
3,943,408 + MPMX20_03739 0.54 -0.4
3,943,408 + MPMX20_03739 0.54 +0.5
3,943,472 - MPMX20_03739 0.59 -1.0
3,943,479 + MPMX20_03739 0.60 -0.3
3,943,527 + MPMX20_03739 0.63 -1.3
3,943,577 + MPMX20_03739 0.67 +0.8
3,943,585 - MPMX20_03739 0.68 +1.3
3,943,649 - MPMX20_03739 0.72 +0.1
3,943,750 + MPMX20_03739 0.80 +0.5
3,943,757 - MPMX20_03739 0.81 +0.4
3,943,786 + MPMX20_03739 0.83 +1.8
3,943,791 + MPMX20_03739 0.83 -0.5
3,943,808 + MPMX20_03739 0.84 +1.1
3,943,816 - MPMX20_03739 0.85 +0.2
3,943,912 + -0.2
3,943,912 - +1.6
3,943,994 + +0.2
3,944,008 + +0.5
3,944,022 + -0.7
3,944,030 - -0.8
3,944,054 + -0.6
3,944,084 + MPMX20_03740 0.15 +1.8
3,944,092 - MPMX20_03740 0.18 +0.0
3,944,100 - MPMX20_03740 0.20 +1.4
3,944,106 - MPMX20_03740 0.22 +0.1
3,944,176 + MPMX20_03740 0.45 +3.7
3,944,207 + MPMX20_03740 0.55 +1.4
3,944,231 - MPMX20_03740 0.63 +1.2
3,944,267 + MPMX20_03740 0.74 -0.1
3,944,289 - MPMX20_03740 0.82 +1.0
3,944,324 + +1.2
3,944,324 + +0.5
3,944,334 + -1.4
3,944,339 + +0.9
3,944,346 + -0.2
3,944,346 + -0.4
3,944,354 - -0.8
3,944,372 - +0.4
3,944,392 - -0.2
3,944,394 + +0.8
3,944,400 + +0.2
3,944,458 + -1.5
3,944,466 - +0.3
3,944,466 - +1.2
3,944,504 + MPMX20_03741 0.13 +0.2
3,944,555 + MPMX20_03741 0.19 -0.1
3,944,636 - MPMX20_03741 0.27 -0.0
3,944,636 - MPMX20_03741 0.27 -0.2
3,944,712 + MPMX20_03741 0.36 +1.5
3,944,712 + MPMX20_03741 0.36 -0.7
3,944,712 + MPMX20_03741 0.36 -0.3
3,944,712 + MPMX20_03741 0.36 +1.2
3,944,720 - MPMX20_03741 0.37 +0.1
3,944,720 - MPMX20_03741 0.37 +1.2
3,944,817 - MPMX20_03741 0.47 +0.3
3,944,821 + MPMX20_03741 0.48 -1.9
3,944,863 + MPMX20_03741 0.53 -0.4
3,944,895 + MPMX20_03741 0.56 +1.8
3,944,900 + MPMX20_03741 0.57 +0.1
3,944,900 + MPMX20_03741 0.57 +0.4
3,944,903 - MPMX20_03741 0.57 +0.6
3,944,903 - MPMX20_03741 0.57 -1.0
3,944,903 - MPMX20_03741 0.57 -0.1
3,944,921 + MPMX20_03741 0.59 +1.8
3,945,014 + MPMX20_03741 0.69 +1.2
3,945,045 + MPMX20_03741 0.73 +1.2
3,945,122 + MPMX20_03741 0.81 +0.4
3,945,148 + MPMX20_03741 0.84 +0.8
3,945,148 + MPMX20_03741 0.84 -0.2
3,945,156 - MPMX20_03741 0.85 +0.2
3,945,156 - MPMX20_03741 0.85 +1.4
3,945,187 - MPMX20_03741 0.88 -1.4
3,945,187 - MPMX20_03741 0.88 +1.2
3,945,245 - -0.2
3,945,255 - +0.8
3,945,281 + -1.0
3,945,485 + MPMX20_03742 0.19 -1.5
3,945,485 + MPMX20_03742 0.19 -1.9
3,945,495 - MPMX20_03742 0.20 -0.5
3,945,559 - MPMX20_03742 0.26 +0.8
3,945,559 - MPMX20_03742 0.26 +0.8
3,945,564 - MPMX20_03742 0.26 -2.0
3,945,564 - MPMX20_03742 0.26 -0.2
3,945,577 + MPMX20_03742 0.28 -0.5
3,945,584 - MPMX20_03742 0.28 -0.5
3,945,585 - MPMX20_03742 0.28 -2.4
3,945,612 + MPMX20_03742 0.31 -0.8
3,945,620 - MPMX20_03742 0.32 -0.8
3,945,620 - MPMX20_03742 0.32 +0.2
3,945,694 - MPMX20_03742 0.39 -2.0
3,945,716 - MPMX20_03742 0.41 +1.8
3,945,718 + MPMX20_03742 0.41 +0.2
3,945,776 + MPMX20_03742 0.47 -2.0
3,945,937 + MPMX20_03742 0.62 -2.7
3,945,942 + MPMX20_03742 0.63 -1.7
3,945,955 - MPMX20_03742 0.64 -2.1
3,946,025 - MPMX20_03742 0.71 -0.7
3,946,164 + MPMX20_03742 0.84 -0.8
3,946,164 + MPMX20_03742 0.84 -2.3
3,946,172 - MPMX20_03742 0.85 -1.5
3,946,172 - MPMX20_03742 0.85 -1.7
3,946,172 - MPMX20_03742 0.85 -1.0
3,946,177 - MPMX20_03742 0.85 -1.5
3,946,177 - MPMX20_03742 0.85 -2.5
3,946,182 - MPMX20_03742 0.86 -0.8
3,946,265 + -3.0
3,946,265 + +1.8
3,946,265 + -1.0
3,946,265 + -2.0
3,946,265 + -1.7
3,946,265 + +1.8
3,946,265 + +0.8
3,946,265 + -0.8
3,946,266 - +0.2
3,946,270 + -2.6
3,946,273 - -2.0
3,946,273 - +0.2
3,946,273 - -0.1
3,946,273 - -0.2
3,946,273 - +0.8

Or see this region's nucleotide sequence