Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02735 and MPMX20_02736 are separated by 48 nucleotides MPMX20_02736 and MPMX20_02737 are separated by 193 nucleotides
MPMX20_02735: MPMX20_02735 - Riboflavin transporter RibZ, at 2,888,092 to 2,889,465
_02735
MPMX20_02736: MPMX20_02736 - Protease HtpX, at 2,889,514 to 2,890,395
_02736
MPMX20_02737: MPMX20_02737 - Tail-specific protease, at 2,890,589 to 2,892,637
_02737
Position (kb)
2889
2890
2891 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 2888.558 kb on + strand, within MPMX20_02735 at 2888.558 kb on + strand, within MPMX20_02735 at 2888.558 kb on + strand, within MPMX20_02735 at 2888.558 kb on + strand, within MPMX20_02735 at 2888.583 kb on - strand, within MPMX20_02735 at 2888.643 kb on + strand, within MPMX20_02735 at 2888.696 kb on + strand, within MPMX20_02735 at 2888.696 kb on + strand, within MPMX20_02735 at 2888.704 kb on - strand, within MPMX20_02735 at 2888.704 kb on - strand, within MPMX20_02735 at 2888.704 kb on - strand, within MPMX20_02735 at 2888.704 kb on - strand, within MPMX20_02735 at 2888.704 kb on - strand, within MPMX20_02735 at 2888.724 kb on - strand, within MPMX20_02735 at 2888.733 kb on - strand, within MPMX20_02735 at 2888.740 kb on - strand, within MPMX20_02735 at 2888.740 kb on - strand, within MPMX20_02735 at 2888.740 kb on - strand, within MPMX20_02735 at 2888.740 kb on - strand, within MPMX20_02735 at 2888.753 kb on - strand, within MPMX20_02735 at 2888.762 kb on + strand, within MPMX20_02735 at 2888.762 kb on + strand, within MPMX20_02735 at 2888.770 kb on - strand, within MPMX20_02735 at 2888.775 kb on - strand, within MPMX20_02735 at 2888.780 kb on + strand, within MPMX20_02735 at 2888.780 kb on + strand, within MPMX20_02735 at 2888.780 kb on + strand, within MPMX20_02735 at 2888.780 kb on + strand, within MPMX20_02735 at 2888.780 kb on + strand, within MPMX20_02735 at 2888.781 kb on - strand, within MPMX20_02735 at 2888.788 kb on - strand, within MPMX20_02735 at 2888.874 kb on + strand, within MPMX20_02735 at 2888.963 kb on - strand, within MPMX20_02735 at 2888.972 kb on - strand, within MPMX20_02735 at 2888.989 kb on - strand, within MPMX20_02735 at 2889.081 kb on + strand, within MPMX20_02735 at 2889.193 kb on + strand, within MPMX20_02735 at 2889.251 kb on + strand, within MPMX20_02735 at 2889.251 kb on + strand, within MPMX20_02735 at 2889.252 kb on - strand, within MPMX20_02735 at 2889.289 kb on + strand, within MPMX20_02735 at 2889.289 kb on + strand, within MPMX20_02735 at 2889.321 kb on - strand, within MPMX20_02735 at 2889.347 kb on + strand at 2889.437 kb on + strand at 2889.437 kb on + strand at 2889.437 kb on + strand at 2889.445 kb on - strand at 2889.447 kb on + strand at 2889.447 kb on + strand at 2889.447 kb on + strand at 2889.447 kb on + strand at 2889.450 kb on - strand at 2889.452 kb on + strand at 2889.455 kb on - strand at 2889.455 kb on - strand at 2889.460 kb on - strand at 2889.487 kb on - strand at 2889.497 kb on - strand at 2889.533 kb on - strand at 2889.533 kb on - strand at 2889.572 kb on + strand at 2889.720 kb on - strand, within MPMX20_02736 at 2889.738 kb on + strand, within MPMX20_02736 at 2889.761 kb on + strand, within MPMX20_02736 at 2889.827 kb on + strand, within MPMX20_02736 at 2889.888 kb on + strand, within MPMX20_02736 at 2889.934 kb on - strand, within MPMX20_02736 at 2889.936 kb on + strand, within MPMX20_02736 at 2890.135 kb on - strand, within MPMX20_02736 at 2890.178 kb on - strand, within MPMX20_02736 at 2890.206 kb on - strand, within MPMX20_02736 at 2890.265 kb on + strand, within MPMX20_02736 at 2890.281 kb on - strand, within MPMX20_02736 at 2890.296 kb on + strand, within MPMX20_02736 at 2890.803 kb on + strand, within MPMX20_02737 at 2890.868 kb on - strand, within MPMX20_02737 at 2890.927 kb on + strand, within MPMX20_02737 at 2890.927 kb on + strand, within MPMX20_02737 at 2890.935 kb on - strand, within MPMX20_02737 at 2890.935 kb on - strand, within MPMX20_02737 at 2891.013 kb on - strand, within MPMX20_02737 at 2891.040 kb on - strand, within MPMX20_02737 at 2891.070 kb on + strand, within MPMX20_02737 at 2891.070 kb on + strand, within MPMX20_02737 at 2891.070 kb on + strand, within MPMX20_02737 at 2891.078 kb on - strand, within MPMX20_02737 at 2891.078 kb on - strand, within MPMX20_02737 at 2891.120 kb on + strand, within MPMX20_02737 at 2891.120 kb on + strand, within MPMX20_02737 at 2891.120 kb on + strand, within MPMX20_02737 at 2891.125 kb on + strand, within MPMX20_02737 at 2891.145 kb on - strand, within MPMX20_02737 at 2891.195 kb on - strand, within MPMX20_02737 at 2891.234 kb on - strand, within MPMX20_02737 at 2891.241 kb on + strand, within MPMX20_02737 at 2891.252 kb on - strand, within MPMX20_02737 at 2891.252 kb on - strand, within MPMX20_02737 at 2891.362 kb on - strand, within MPMX20_02737
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,888,558 + MPMX20_02735 0.34 -0.2 2,888,558 + MPMX20_02735 0.34 -0.5 2,888,558 + MPMX20_02735 0.34 -0.2 2,888,558 + MPMX20_02735 0.34 +0.2 2,888,583 - MPMX20_02735 0.36 -0.6 2,888,643 + MPMX20_02735 0.40 -0.5 2,888,696 + MPMX20_02735 0.44 -0.3 2,888,696 + MPMX20_02735 0.44 -0.9 2,888,704 - MPMX20_02735 0.45 -0.6 2,888,704 - MPMX20_02735 0.45 -0.0 2,888,704 - MPMX20_02735 0.45 +0.3 2,888,704 - MPMX20_02735 0.45 -0.2 2,888,704 - MPMX20_02735 0.45 -0.7 2,888,724 - MPMX20_02735 0.46 +0.5 2,888,733 - MPMX20_02735 0.47 -0.3 2,888,740 - MPMX20_02735 0.47 +0.7 2,888,740 - MPMX20_02735 0.47 -0.6 2,888,740 - MPMX20_02735 0.47 -1.2 2,888,740 - MPMX20_02735 0.47 +1.0 2,888,753 - MPMX20_02735 0.48 +0.1 2,888,762 + MPMX20_02735 0.49 +1.5 2,888,762 + MPMX20_02735 0.49 +0.7 2,888,770 - MPMX20_02735 0.49 -0.2 2,888,775 - MPMX20_02735 0.50 +0.6 2,888,780 + MPMX20_02735 0.50 +0.6 2,888,780 + MPMX20_02735 0.50 +2.1 2,888,780 + MPMX20_02735 0.50 +0.2 2,888,780 + MPMX20_02735 0.50 -0.4 2,888,780 + MPMX20_02735 0.50 -1.2 2,888,781 - MPMX20_02735 0.50 +1.2 2,888,788 - MPMX20_02735 0.51 -0.9 2,888,874 + MPMX20_02735 0.57 +1.1 2,888,963 - MPMX20_02735 0.63 -1.6 2,888,972 - MPMX20_02735 0.64 +0.5 2,888,989 - MPMX20_02735 0.65 -0.0 2,889,081 + MPMX20_02735 0.72 -0.3 2,889,193 + MPMX20_02735 0.80 +0.5 2,889,251 + MPMX20_02735 0.84 +0.7 2,889,251 + MPMX20_02735 0.84 +0.4 2,889,252 - MPMX20_02735 0.84 -0.1 2,889,289 + MPMX20_02735 0.87 +0.4 2,889,289 + MPMX20_02735 0.87 +0.1 2,889,321 - MPMX20_02735 0.89 -0.9 2,889,347 + -0.1 2,889,437 + -0.3 2,889,437 + -0.9 2,889,437 + -1.8 2,889,445 - +0.3 2,889,447 + +5.2 2,889,447 + +0.0 2,889,447 + -0.9 2,889,447 + +1.4 2,889,450 - -1.1 2,889,452 + -0.4 2,889,455 - +0.4 2,889,455 - -0.1 2,889,460 - +0.0 2,889,487 - -0.1 2,889,497 - +0.3 2,889,533 - +1.4 2,889,533 - -0.7 2,889,572 + -1.0 2,889,720 - MPMX20_02736 0.23 -1.4 2,889,738 + MPMX20_02736 0.25 -0.0 2,889,761 + MPMX20_02736 0.28 +2.3 2,889,827 + MPMX20_02736 0.35 +0.4 2,889,888 + MPMX20_02736 0.42 +0.7 2,889,934 - MPMX20_02736 0.48 -0.5 2,889,936 + MPMX20_02736 0.48 +0.4 2,890,135 - MPMX20_02736 0.70 +0.1 2,890,178 - MPMX20_02736 0.75 -1.1 2,890,206 - MPMX20_02736 0.78 -1.4 2,890,265 + MPMX20_02736 0.85 -0.6 2,890,281 - MPMX20_02736 0.87 -0.2 2,890,296 + MPMX20_02736 0.89 -1.7 2,890,803 + MPMX20_02737 0.10 -2.8 2,890,868 - MPMX20_02737 0.14 -3.1 2,890,927 + MPMX20_02737 0.16 -3.4 2,890,927 + MPMX20_02737 0.16 -2.7 2,890,935 - MPMX20_02737 0.17 -3.6 2,890,935 - MPMX20_02737 0.17 -4.2 2,891,013 - MPMX20_02737 0.21 -4.3 2,891,040 - MPMX20_02737 0.22 -2.3 2,891,070 + MPMX20_02737 0.23 -2.6 2,891,070 + MPMX20_02737 0.23 -4.4 2,891,070 + MPMX20_02737 0.23 -0.3 2,891,078 - MPMX20_02737 0.24 -2.2 2,891,078 - MPMX20_02737 0.24 -3.9 2,891,120 + MPMX20_02737 0.26 -2.6 2,891,120 + MPMX20_02737 0.26 -3.7 2,891,120 + MPMX20_02737 0.26 -1.7 2,891,125 + MPMX20_02737 0.26 -4.4 2,891,145 - MPMX20_02737 0.27 -4.5 2,891,195 - MPMX20_02737 0.30 -4.5 2,891,234 - MPMX20_02737 0.31 -3.1 2,891,241 + MPMX20_02737 0.32 -0.6 2,891,252 - MPMX20_02737 0.32 -2.4 2,891,252 - MPMX20_02737 0.32 -3.0 2,891,362 - MPMX20_02737 0.38 -3.1
Or see this region's nucleotide sequence