Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02796

Experiment: TSB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02795 and MPMX20_02796 are separated by 430 nucleotidesMPMX20_02796 and MPMX20_02797 are separated by 189 nucleotidesMPMX20_02797 and MPMX20_02798 are separated by 19 nucleotides MPMX20_02795: MPMX20_02795 - hypothetical protein, at 2,952,301 to 2,952,873 _02795 MPMX20_02796: MPMX20_02796 - C4-dicarboxylate transport protein, at 2,953,304 to 2,954,563 _02796 MPMX20_02797: MPMX20_02797 - Chemotaxis protein CheW, at 2,954,753 to 2,955,256 _02797 MPMX20_02798: MPMX20_02798 - Chemotaxis protein CheA, at 2,955,276 to 2,957,309 _02798 Position (kb) 2953 2954 2955Strain fitness (log2 ratio) -2 -1 0 1 2at 2952.314 kb on - strandat 2952.359 kb on - strand, within MPMX20_02795at 2952.390 kb on + strand, within MPMX20_02795at 2952.392 kb on + strand, within MPMX20_02795at 2952.482 kb on + strand, within MPMX20_02795at 2952.488 kb on + strand, within MPMX20_02795at 2952.496 kb on - strand, within MPMX20_02795at 2952.511 kb on - strand, within MPMX20_02795at 2952.524 kb on - strand, within MPMX20_02795at 2952.536 kb on - strand, within MPMX20_02795at 2952.545 kb on - strand, within MPMX20_02795at 2952.605 kb on - strand, within MPMX20_02795at 2952.652 kb on + strand, within MPMX20_02795at 2952.652 kb on + strand, within MPMX20_02795at 2952.692 kb on - strand, within MPMX20_02795at 2952.707 kb on + strand, within MPMX20_02795at 2952.734 kb on + strand, within MPMX20_02795at 2952.766 kb on + strand, within MPMX20_02795at 2952.819 kb on - strandat 2952.821 kb on - strandat 2952.827 kb on + strandat 2952.840 kb on + strandat 2952.840 kb on + strandat 2952.892 kb on - strandat 2953.017 kb on + strandat 2953.017 kb on + strandat 2953.017 kb on + strandat 2953.025 kb on - strandat 2953.025 kb on - strandat 2953.025 kb on - strandat 2953.025 kb on - strandat 2953.106 kb on + strandat 2953.107 kb on + strandat 2953.114 kb on - strandat 2953.270 kb on + strandat 2953.311 kb on + strandat 2953.319 kb on - strandat 2953.389 kb on + strandat 2953.410 kb on - strandat 2953.488 kb on - strand, within MPMX20_02796at 2953.493 kb on - strand, within MPMX20_02796at 2953.514 kb on - strand, within MPMX20_02796at 2953.674 kb on + strand, within MPMX20_02796at 2953.674 kb on + strand, within MPMX20_02796at 2953.845 kb on + strand, within MPMX20_02796at 2954.037 kb on + strand, within MPMX20_02796at 2954.074 kb on - strand, within MPMX20_02796at 2954.093 kb on + strand, within MPMX20_02796at 2954.150 kb on - strand, within MPMX20_02796at 2954.197 kb on + strand, within MPMX20_02796at 2954.204 kb on + strand, within MPMX20_02796at 2954.211 kb on + strand, within MPMX20_02796at 2954.211 kb on + strand, within MPMX20_02796at 2954.211 kb on + strand, within MPMX20_02796at 2954.211 kb on + strand, within MPMX20_02796at 2954.219 kb on - strand, within MPMX20_02796at 2954.226 kb on + strand, within MPMX20_02796at 2954.226 kb on + strand, within MPMX20_02796at 2954.226 kb on + strand, within MPMX20_02796at 2954.226 kb on + strand, within MPMX20_02796at 2954.229 kb on + strand, within MPMX20_02796at 2954.234 kb on - strand, within MPMX20_02796at 2954.234 kb on - strand, within MPMX20_02796at 2954.234 kb on - strand, within MPMX20_02796at 2954.242 kb on - strand, within MPMX20_02796at 2954.244 kb on - strand, within MPMX20_02796at 2954.282 kb on + strand, within MPMX20_02796at 2954.287 kb on - strand, within MPMX20_02796at 2954.298 kb on + strand, within MPMX20_02796at 2954.306 kb on - strand, within MPMX20_02796at 2954.348 kb on - strand, within MPMX20_02796at 2954.589 kb on + strandat 2954.589 kb on + strandat 2954.589 kb on + strandat 2954.589 kb on + strandat 2954.597 kb on - strandat 2954.597 kb on - strandat 2954.597 kb on - strandat 2954.597 kb on - strandat 2954.633 kb on + strandat 2954.653 kb on - strandat 2954.735 kb on - strandat 2954.758 kb on - strandat 2954.796 kb on + strandat 2954.799 kb on - strandat 2954.809 kb on - strand, within MPMX20_02797at 2954.809 kb on - strand, within MPMX20_02797at 2954.921 kb on + strand, within MPMX20_02797at 2954.930 kb on + strand, within MPMX20_02797at 2954.964 kb on + strand, within MPMX20_02797at 2955.046 kb on + strand, within MPMX20_02797at 2955.046 kb on + strand, within MPMX20_02797at 2955.046 kb on + strand, within MPMX20_02797at 2955.046 kb on + strand, within MPMX20_02797at 2955.051 kb on + strand, within MPMX20_02797at 2955.051 kb on + strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.061 kb on + strand, within MPMX20_02797at 2955.061 kb on + strand, within MPMX20_02797at 2955.061 kb on + strand, within MPMX20_02797at 2955.061 kb on + strand, within MPMX20_02797at 2955.088 kb on - strand, within MPMX20_02797at 2955.116 kb on + strand, within MPMX20_02797at 2955.118 kb on + strand, within MPMX20_02797at 2955.126 kb on - strand, within MPMX20_02797at 2955.172 kb on + strand, within MPMX20_02797at 2955.182 kb on + strand, within MPMX20_02797at 2955.203 kb on + strand, within MPMX20_02797at 2955.264 kb on + strandat 2955.271 kb on - strandat 2955.283 kb on + strandat 2955.283 kb on + strandat 2955.344 kb on + strandat 2955.357 kb on - strandat 2955.368 kb on - strandat 2955.368 kb on - strandat 2955.368 kb on - strandat 2955.424 kb on + strandat 2955.427 kb on + strandat 2955.427 kb on + strandat 2955.432 kb on - strandat 2955.435 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,952,314 - -0.1
2,952,359 - MPMX20_02795 0.10 +0.3
2,952,390 + MPMX20_02795 0.16 +0.1
2,952,392 + MPMX20_02795 0.16 +0.6
2,952,482 + MPMX20_02795 0.32 +2.6
2,952,488 + MPMX20_02795 0.33 +0.2
2,952,496 - MPMX20_02795 0.34 +0.6
2,952,511 - MPMX20_02795 0.37 +1.0
2,952,524 - MPMX20_02795 0.39 +1.6
2,952,536 - MPMX20_02795 0.41 +0.4
2,952,545 - MPMX20_02795 0.43 +0.6
2,952,605 - MPMX20_02795 0.53 -0.4
2,952,652 + MPMX20_02795 0.61 +0.4
2,952,652 + MPMX20_02795 0.61 +1.9
2,952,692 - MPMX20_02795 0.68 -0.4
2,952,707 + MPMX20_02795 0.71 -0.9
2,952,734 + MPMX20_02795 0.76 -0.4
2,952,766 + MPMX20_02795 0.81 +1.6
2,952,819 - -0.0
2,952,821 - +0.6
2,952,827 + -0.8
2,952,840 + +1.3
2,952,840 + +0.8
2,952,892 - +1.6
2,953,017 + +0.2
2,953,017 + +1.6
2,953,017 + +1.3
2,953,025 - -0.4
2,953,025 - -0.2
2,953,025 - +0.6
2,953,025 - -0.7
2,953,106 + +0.1
2,953,107 + -1.2
2,953,114 - -0.4
2,953,270 + +0.6
2,953,311 + +0.7
2,953,319 - +0.5
2,953,389 + -0.1
2,953,410 - +0.3
2,953,488 - MPMX20_02796 0.15 +0.3
2,953,493 - MPMX20_02796 0.15 +0.1
2,953,514 - MPMX20_02796 0.17 +1.3
2,953,674 + MPMX20_02796 0.29 +0.6
2,953,674 + MPMX20_02796 0.29 -0.9
2,953,845 + MPMX20_02796 0.43 -0.7
2,954,037 + MPMX20_02796 0.58 -0.0
2,954,074 - MPMX20_02796 0.61 -0.6
2,954,093 + MPMX20_02796 0.63 -0.1
2,954,150 - MPMX20_02796 0.67 +2.2
2,954,197 + MPMX20_02796 0.71 -0.4
2,954,204 + MPMX20_02796 0.71 +0.2
2,954,211 + MPMX20_02796 0.72 -1.7
2,954,211 + MPMX20_02796 0.72 +0.1
2,954,211 + MPMX20_02796 0.72 -0.1
2,954,211 + MPMX20_02796 0.72 -0.9
2,954,219 - MPMX20_02796 0.73 +0.8
2,954,226 + MPMX20_02796 0.73 +0.8
2,954,226 + MPMX20_02796 0.73 -0.7
2,954,226 + MPMX20_02796 0.73 -0.1
2,954,226 + MPMX20_02796 0.73 -0.1
2,954,229 + MPMX20_02796 0.73 -0.4
2,954,234 - MPMX20_02796 0.74 -1.0
2,954,234 - MPMX20_02796 0.74 +0.1
2,954,234 - MPMX20_02796 0.74 -0.0
2,954,242 - MPMX20_02796 0.74 -1.2
2,954,244 - MPMX20_02796 0.75 -0.4
2,954,282 + MPMX20_02796 0.78 +0.1
2,954,287 - MPMX20_02796 0.78 -0.7
2,954,298 + MPMX20_02796 0.79 -0.5
2,954,306 - MPMX20_02796 0.80 +1.5
2,954,348 - MPMX20_02796 0.83 -0.2
2,954,589 + -1.2
2,954,589 + -1.4
2,954,589 + -0.2
2,954,589 + +0.5
2,954,597 - +0.1
2,954,597 - +1.0
2,954,597 - +0.5
2,954,597 - -0.0
2,954,633 + -1.2
2,954,653 - -1.7
2,954,735 - -1.5
2,954,758 - -0.4
2,954,796 + -0.1
2,954,799 - -0.4
2,954,809 - MPMX20_02797 0.11 +1.0
2,954,809 - MPMX20_02797 0.11 -0.2
2,954,921 + MPMX20_02797 0.33 +0.2
2,954,930 + MPMX20_02797 0.35 +0.2
2,954,964 + MPMX20_02797 0.42 -0.5
2,955,046 + MPMX20_02797 0.58 +0.6
2,955,046 + MPMX20_02797 0.58 -0.4
2,955,046 + MPMX20_02797 0.58 -0.7
2,955,046 + MPMX20_02797 0.58 -0.8
2,955,051 + MPMX20_02797 0.59 +1.8
2,955,051 + MPMX20_02797 0.59 -0.2
2,955,054 - MPMX20_02797 0.60 -1.1
2,955,054 - MPMX20_02797 0.60 -1.2
2,955,054 - MPMX20_02797 0.60 -0.3
2,955,054 - MPMX20_02797 0.60 +0.3
2,955,054 - MPMX20_02797 0.60 +0.3
2,955,061 + MPMX20_02797 0.61 +0.8
2,955,061 + MPMX20_02797 0.61 +0.6
2,955,061 + MPMX20_02797 0.61 -0.9
2,955,061 + MPMX20_02797 0.61 -0.7
2,955,088 - MPMX20_02797 0.66 +0.3
2,955,116 + MPMX20_02797 0.72 +0.9
2,955,118 + MPMX20_02797 0.72 +0.7
2,955,126 - MPMX20_02797 0.74 +0.2
2,955,172 + MPMX20_02797 0.83 -0.5
2,955,182 + MPMX20_02797 0.85 +2.2
2,955,203 + MPMX20_02797 0.89 -0.8
2,955,264 + -2.7
2,955,271 - -0.7
2,955,283 + -0.9
2,955,283 + -0.6
2,955,344 + +0.3
2,955,357 - -1.7
2,955,368 - -0.2
2,955,368 - -0.5
2,955,368 - -1.6
2,955,424 + +1.1
2,955,427 + +0.4
2,955,427 + +0.6
2,955,432 - +0.6
2,955,435 - -0.7

Or see this region's nucleotide sequence