Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04685

Experiment: 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04684 and MPMX20_04685 are separated by 301 nucleotidesMPMX20_04685 and MPMX20_04686 are separated by 131 nucleotidesMPMX20_04686 and MPMX20_04687 are separated by 331 nucleotides MPMX20_04684: MPMX20_04684 - hypothetical protein, at 37,873 to 38,736 _04684 MPMX20_04685: MPMX20_04685 - hypothetical protein, at 39,038 to 39,280 _04685 MPMX20_04686: MPMX20_04686 - Phospholipase D, at 39,412 to 39,792 _04686 MPMX20_04687: MPMX20_04687 - hypothetical protein, at 40,124 to 40,465 _04687 Position (kb) 39 40Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 38.045 kb on - strand, within MPMX20_04684at 38.048 kb on - strand, within MPMX20_04684at 38.063 kb on - strand, within MPMX20_04684at 38.085 kb on - strand, within MPMX20_04684at 38.106 kb on + strand, within MPMX20_04684at 38.162 kb on + strand, within MPMX20_04684at 38.259 kb on - strand, within MPMX20_04684at 38.274 kb on - strand, within MPMX20_04684at 38.277 kb on + strand, within MPMX20_04684at 38.279 kb on - strand, within MPMX20_04684at 38.298 kb on + strand, within MPMX20_04684at 38.306 kb on - strand, within MPMX20_04684at 38.306 kb on - strand, within MPMX20_04684at 38.320 kb on + strand, within MPMX20_04684at 38.328 kb on - strand, within MPMX20_04684at 38.328 kb on - strand, within MPMX20_04684at 38.332 kb on - strand, within MPMX20_04684at 38.397 kb on + strand, within MPMX20_04684at 38.405 kb on - strand, within MPMX20_04684at 38.405 kb on - strand, within MPMX20_04684at 38.450 kb on - strand, within MPMX20_04684at 38.455 kb on + strand, within MPMX20_04684at 38.478 kb on + strand, within MPMX20_04684at 38.498 kb on + strand, within MPMX20_04684at 38.508 kb on - strand, within MPMX20_04684at 38.527 kb on + strand, within MPMX20_04684at 38.552 kb on + strand, within MPMX20_04684at 38.552 kb on + strand, within MPMX20_04684at 38.552 kb on + strand, within MPMX20_04684at 38.560 kb on - strand, within MPMX20_04684at 38.569 kb on + strand, within MPMX20_04684at 38.605 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.661 kb on - strandat 38.661 kb on - strandat 38.730 kb on + strandat 38.810 kb on + strandat 38.810 kb on + strandat 38.816 kb on - strandat 38.816 kb on - strandat 38.830 kb on - strandat 38.830 kb on - strandat 38.836 kb on + strandat 38.844 kb on - strandat 38.846 kb on - strandat 38.853 kb on - strandat 38.853 kb on - strandat 38.867 kb on - strandat 38.964 kb on - strandat 38.967 kb on + strandat 39.057 kb on + strandat 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.078 kb on - strand, within MPMX20_04685at 39.078 kb on - strand, within MPMX20_04685at 39.078 kb on - strand, within MPMX20_04685at 39.101 kb on - strand, within MPMX20_04685at 39.119 kb on + strand, within MPMX20_04685at 39.124 kb on - strand, within MPMX20_04685at 39.205 kb on + strand, within MPMX20_04685at 39.213 kb on - strand, within MPMX20_04685at 39.213 kb on - strand, within MPMX20_04685at 39.213 kb on - strand, within MPMX20_04685at 39.219 kb on + strand, within MPMX20_04685at 39.219 kb on + strand, within MPMX20_04685at 39.219 kb on + strand, within MPMX20_04685at 39.219 kb on + strand, within MPMX20_04685at 39.227 kb on - strand, within MPMX20_04685at 39.289 kb on + strandat 39.289 kb on + strandat 39.289 kb on + strandat 39.295 kb on + strandat 39.320 kb on + strandat 39.328 kb on - strandat 39.377 kb on - strandat 39.377 kb on - strandat 39.383 kb on - strandat 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.514 kb on + strand, within MPMX20_04686at 39.546 kb on + strand, within MPMX20_04686at 39.561 kb on + strand, within MPMX20_04686at 39.622 kb on - strand, within MPMX20_04686at 39.622 kb on - strand, within MPMX20_04686at 39.630 kb on + strand, within MPMX20_04686at 39.663 kb on - strand, within MPMX20_04686at 39.687 kb on + strand, within MPMX20_04686at 39.692 kb on + strand, within MPMX20_04686at 39.695 kb on - strand, within MPMX20_04686at 39.716 kb on + strand, within MPMX20_04686at 39.719 kb on - strand, within MPMX20_04686at 39.719 kb on - strand, within MPMX20_04686at 39.723 kb on + strand, within MPMX20_04686at 39.723 kb on + strand, within MPMX20_04686at 39.724 kb on - strand, within MPMX20_04686at 39.724 kb on - strand, within MPMX20_04686at 39.724 kb on - strand, within MPMX20_04686at 39.724 kb on - strand, within MPMX20_04686at 39.731 kb on - strand, within MPMX20_04686at 39.760 kb on + strandat 39.765 kb on + strandat 39.765 kb on + strandat 39.768 kb on - strandat 39.768 kb on - strandat 39.781 kb on + strandat 39.782 kb on + strandat 39.790 kb on - strandat 39.796 kb on - strandat 39.807 kb on + strandat 39.807 kb on - strandat 39.832 kb on - strandat 39.835 kb on + strandat 39.843 kb on + strandat 39.843 kb on + strandat 39.843 kb on + strandat 39.843 kb on + strandat 39.845 kb on + strandat 39.851 kb on - strandat 39.851 kb on - strandat 39.851 kb on - strandat 39.892 kb on - strandat 39.892 kb on - strandat 39.905 kb on - strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.917 kb on + strandat 39.920 kb on - strandat 39.920 kb on - strandat 39.920 kb on - strandat 39.921 kb on - strandat 39.939 kb on - strandat 39.962 kb on + strandat 40.005 kb on - strandat 40.014 kb on - strandat 40.045 kb on + strandat 40.050 kb on + strandat 40.058 kb on - strandat 40.058 kb on - strandat 40.058 kb on - strandat 40.063 kb on + strandat 40.063 kb on + strandat 40.072 kb on + strandat 40.089 kb on + strandat 40.094 kb on + strandat 40.102 kb on + strandat 40.102 kb on - strandat 40.131 kb on - strandat 40.131 kb on - strandat 40.136 kb on - strandat 40.146 kb on - strandat 40.152 kb on + strandat 40.152 kb on + strandat 40.168 kb on + strand, within MPMX20_04687at 40.168 kb on + strand, within MPMX20_04687at 40.197 kb on - strand, within MPMX20_04687at 40.211 kb on - strand, within MPMX20_04687at 40.223 kb on - strand, within MPMX20_04687at 40.241 kb on + strand, within MPMX20_04687at 40.243 kb on - strand, within MPMX20_04687

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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38,045 - MPMX20_04684 0.20 -0.1
38,048 - MPMX20_04684 0.20 -0.1
38,063 - MPMX20_04684 0.22 -1.7
38,085 - MPMX20_04684 0.25 +0.9
38,106 + MPMX20_04684 0.27 +0.3
38,162 + MPMX20_04684 0.33 -0.4
38,259 - MPMX20_04684 0.45 +1.0
38,274 - MPMX20_04684 0.46 +0.0
38,277 + MPMX20_04684 0.47 +0.5
38,279 - MPMX20_04684 0.47 +0.0
38,298 + MPMX20_04684 0.49 -1.0
38,306 - MPMX20_04684 0.50 -2.0
38,306 - MPMX20_04684 0.50 +0.8
38,320 + MPMX20_04684 0.52 +0.0
38,328 - MPMX20_04684 0.53 +0.3
38,328 - MPMX20_04684 0.53 -0.1
38,332 - MPMX20_04684 0.53 +1.3
38,397 + MPMX20_04684 0.61 +0.0
38,405 - MPMX20_04684 0.62 +1.0
38,405 - MPMX20_04684 0.62 +0.7
38,450 - MPMX20_04684 0.67 +0.2
38,455 + MPMX20_04684 0.67 +1.6
38,478 + MPMX20_04684 0.70 -0.4
38,498 + MPMX20_04684 0.72 +0.6
38,508 - MPMX20_04684 0.73 +0.6
38,527 + MPMX20_04684 0.76 +1.1
38,552 + MPMX20_04684 0.79 -0.8
38,552 + MPMX20_04684 0.79 +1.9
38,552 + MPMX20_04684 0.79 +1.4
38,560 - MPMX20_04684 0.80 -1.2
38,569 + MPMX20_04684 0.81 +0.9
38,605 + MPMX20_04684 0.85 +1.9
38,631 + MPMX20_04684 0.88 -0.3
38,631 + MPMX20_04684 0.88 +1.6
38,631 + MPMX20_04684 0.88 -0.2
38,631 + MPMX20_04684 0.88 +2.3
38,631 + MPMX20_04684 0.88 -0.4
38,631 + MPMX20_04684 0.88 +0.6
38,631 + MPMX20_04684 0.88 +0.0
38,639 - MPMX20_04684 0.89 -1.6
38,639 - MPMX20_04684 0.89 +0.3
38,639 - MPMX20_04684 0.89 +0.2
38,639 - MPMX20_04684 0.89 +0.0
38,639 - MPMX20_04684 0.89 +1.6
38,661 - +0.4
38,661 - +3.5
38,730 + +0.4
38,810 + +0.1
38,810 + +0.4
38,816 - -0.5
38,816 - -1.4
38,830 - -0.0
38,830 - +0.0
38,836 + -0.7
38,844 - +2.4
38,846 - -0.4
38,853 - +2.6
38,853 - +0.0
38,867 - -0.2
38,964 - -0.2
38,967 + +1.3
39,057 + -1.2
39,070 + MPMX20_04685 0.13 -1.9
39,070 + MPMX20_04685 0.13 +0.6
39,070 + MPMX20_04685 0.13 +0.2
39,070 + MPMX20_04685 0.13 +0.4
39,070 + MPMX20_04685 0.13 -0.7
39,070 + MPMX20_04685 0.13 -0.4
39,070 + MPMX20_04685 0.13 -1.1
39,070 + MPMX20_04685 0.13 -0.7
39,070 + MPMX20_04685 0.13 +0.6
39,078 - MPMX20_04685 0.16 -2.0
39,078 - MPMX20_04685 0.16 -2.7
39,078 - MPMX20_04685 0.16 -2.7
39,101 - MPMX20_04685 0.26 -1.6
39,119 + MPMX20_04685 0.33 -1.0
39,124 - MPMX20_04685 0.35 -1.1
39,205 + MPMX20_04685 0.69 -2.4
39,213 - MPMX20_04685 0.72 -1.2
39,213 - MPMX20_04685 0.72 -1.0
39,213 - MPMX20_04685 0.72 -1.5
39,219 + MPMX20_04685 0.74 -1.3
39,219 + MPMX20_04685 0.74 +1.6
39,219 + MPMX20_04685 0.74 +0.1
39,219 + MPMX20_04685 0.74 -1.7
39,227 - MPMX20_04685 0.78 -2.7
39,289 + -0.6
39,289 + -0.2
39,289 + +1.0
39,295 + -0.6
39,320 + +1.5
39,328 - +0.6
39,377 - -1.0
39,377 - +2.1
39,383 - -1.1
39,478 + MPMX20_04686 0.17 +0.0
39,478 + MPMX20_04686 0.17 -1.4
39,478 + MPMX20_04686 0.17 +1.7
39,478 + MPMX20_04686 0.17 +3.2
39,478 + MPMX20_04686 0.17 +2.6
39,478 + MPMX20_04686 0.17 +1.6
39,478 + MPMX20_04686 0.17 +0.6
39,478 + MPMX20_04686 0.17 +3.2
39,478 + MPMX20_04686 0.17 -0.6
39,478 + MPMX20_04686 0.17 +1.2
39,514 + MPMX20_04686 0.27 -0.1
39,546 + MPMX20_04686 0.35 +1.0
39,561 + MPMX20_04686 0.39 +2.6
39,622 - MPMX20_04686 0.55 -4.1
39,622 - MPMX20_04686 0.55 +1.6
39,630 + MPMX20_04686 0.57 +1.1
39,663 - MPMX20_04686 0.66 -3.0
39,687 + MPMX20_04686 0.72 +1.1
39,692 + MPMX20_04686 0.73 +2.6
39,695 - MPMX20_04686 0.74 +0.6
39,716 + MPMX20_04686 0.80 +1.0
39,719 - MPMX20_04686 0.81 -2.8
39,719 - MPMX20_04686 0.81 -2.1
39,723 + MPMX20_04686 0.82 +0.8
39,723 + MPMX20_04686 0.82 +1.2
39,724 - MPMX20_04686 0.82 -0.6
39,724 - MPMX20_04686 0.82 -3.2
39,724 - MPMX20_04686 0.82 +2.6
39,724 - MPMX20_04686 0.82 -3.4
39,731 - MPMX20_04686 0.84 -5.0
39,760 + +0.8
39,765 + +0.2
39,765 + +1.2
39,768 - -4.6
39,768 - -4.3
39,781 + +1.5
39,782 + +0.2
39,790 - -3.2
39,796 - +0.5
39,807 + -1.2
39,807 - -2.6
39,832 - -3.4
39,835 + +0.9
39,843 + +0.3
39,843 + -0.1
39,843 + +2.5
39,843 + -1.4
39,845 + +0.8
39,851 - -0.7
39,851 - -2.0
39,851 - -1.1
39,892 - +0.9
39,892 - -2.0
39,905 - -0.2
39,912 + +2.0
39,912 + +1.6
39,912 + +0.4
39,912 + +0.4
39,912 + +0.8
39,912 + +1.2
39,912 + +3.5
39,917 + +1.4
39,920 - -0.5
39,920 - -1.0
39,920 - -2.8
39,921 - -0.6
39,939 - +1.5
39,962 + +0.8
40,005 - +0.0
40,014 - -1.9
40,045 + +2.1
40,050 + -0.1
40,058 - -1.4
40,058 - -3.8
40,058 - -2.7
40,063 + +0.3
40,063 + +0.3
40,072 + +0.6
40,089 + +0.7
40,094 + +0.4
40,102 + -0.4
40,102 - -0.4
40,131 - -1.8
40,131 - +0.9
40,136 - +0.6
40,146 - -3.6
40,152 + -0.1
40,152 + +0.9
40,168 + MPMX20_04687 0.13 +0.1
40,168 + MPMX20_04687 0.13 -0.4
40,197 - MPMX20_04687 0.21 -2.8
40,211 - MPMX20_04687 0.25 -3.4
40,223 - MPMX20_04687 0.29 -3.5
40,241 + MPMX20_04687 0.34 -0.1
40,243 - MPMX20_04687 0.35 -2.0

Or see this region's nucleotide sequence