Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04323

Experiment: 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04321 and MPMX20_04322 are separated by 308 nucleotidesMPMX20_04322 and MPMX20_04323 are separated by 39 nucleotidesMPMX20_04323 and MPMX20_04324 are separated by 124 nucleotidesMPMX20_04324 and MPMX20_04325 overlap by 20 nucleotides MPMX20_04321: MPMX20_04321 - putative oxidoreductase YhhX, at 4,515,413 to 4,516,450 _04321 MPMX20_04322: MPMX20_04322 - L-amino acid N-acetyltransferase AaaT, at 4,516,759 to 4,517,247 _04322 MPMX20_04323: MPMX20_04323 - Glutathione hydrolase proenzyme, at 4,517,287 to 4,519,032 _04323 MPMX20_04324: MPMX20_04324 - putative protein YhhA, at 4,519,157 to 4,519,543 _04324 MPMX20_04325: MPMX20_04325 - Glycerophosphodiester phosphodiesterase, cytoplasmic, at 4,519,524 to 4,520,273 _04325 Position (kb) 4517 4518 4519 4520Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8 9at 4516.307 kb on + strand, within MPMX20_04321at 4516.315 kb on - strand, within MPMX20_04321at 4516.315 kb on - strand, within MPMX20_04321at 4516.379 kb on + strandat 4516.387 kb on - strandat 4516.389 kb on + strandat 4516.439 kb on + strandat 4516.461 kb on + strandat 4516.506 kb on + strandat 4516.506 kb on + strandat 4516.506 kb on + strandat 4516.514 kb on - strandat 4516.556 kb on + strandat 4516.564 kb on - strandat 4516.566 kb on + strandat 4516.566 kb on + strandat 4516.566 kb on + strandat 4516.579 kb on - strandat 4516.597 kb on + strandat 4516.622 kb on - strandat 4516.624 kb on - strandat 4516.832 kb on - strand, within MPMX20_04322at 4516.834 kb on - strand, within MPMX20_04322at 4516.847 kb on + strand, within MPMX20_04322at 4516.855 kb on - strand, within MPMX20_04322at 4516.855 kb on - strand, within MPMX20_04322at 4516.855 kb on - strand, within MPMX20_04322at 4516.902 kb on + strand, within MPMX20_04322at 4516.928 kb on + strand, within MPMX20_04322at 4516.928 kb on + strand, within MPMX20_04322at 4516.936 kb on - strand, within MPMX20_04322at 4517.006 kb on + strand, within MPMX20_04322at 4517.048 kb on - strand, within MPMX20_04322at 4517.189 kb on + strand, within MPMX20_04322at 4517.199 kb on + strandat 4517.199 kb on + strandat 4517.199 kb on + strandat 4517.199 kb on + strandat 4517.199 kb on + strandat 4517.207 kb on - strandat 4517.217 kb on - strandat 4517.325 kb on - strandat 4517.338 kb on - strandat 4517.338 kb on - strandat 4517.358 kb on + strandat 4517.373 kb on - strandat 4517.432 kb on - strandat 4517.551 kb on + strand, within MPMX20_04323at 4517.575 kb on + strand, within MPMX20_04323at 4517.580 kb on + strand, within MPMX20_04323at 4517.590 kb on + strand, within MPMX20_04323at 4517.623 kb on - strand, within MPMX20_04323at 4517.802 kb on + strand, within MPMX20_04323at 4517.802 kb on + strand, within MPMX20_04323at 4517.810 kb on - strand, within MPMX20_04323at 4517.810 kb on - strand, within MPMX20_04323at 4517.810 kb on - strand, within MPMX20_04323at 4517.810 kb on - strand, within MPMX20_04323at 4517.817 kb on - strand, within MPMX20_04323at 4517.830 kb on - strand, within MPMX20_04323at 4517.851 kb on - strand, within MPMX20_04323at 4517.884 kb on - strand, within MPMX20_04323at 4517.885 kb on - strand, within MPMX20_04323at 4517.970 kb on + strand, within MPMX20_04323at 4518.058 kb on - strand, within MPMX20_04323at 4518.074 kb on - strand, within MPMX20_04323at 4518.215 kb on + strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.225 kb on - strand, within MPMX20_04323at 4518.309 kb on + strand, within MPMX20_04323at 4518.309 kb on + strand, within MPMX20_04323at 4518.317 kb on - strand, within MPMX20_04323at 4518.333 kb on + strand, within MPMX20_04323at 4518.374 kb on + strand, within MPMX20_04323at 4518.382 kb on - strand, within MPMX20_04323at 4518.483 kb on + strand, within MPMX20_04323at 4518.519 kb on + strand, within MPMX20_04323at 4518.680 kb on - strand, within MPMX20_04323at 4518.780 kb on - strand, within MPMX20_04323at 4518.791 kb on - strand, within MPMX20_04323at 4518.816 kb on + strand, within MPMX20_04323at 4518.849 kb on + strand, within MPMX20_04323at 4518.878 kb on + strandat 4518.878 kb on + strandat 4518.878 kb on + strandat 4518.883 kb on + strandat 4518.886 kb on - strandat 4518.886 kb on - strandat 4518.974 kb on - strandat 4518.999 kb on + strandat 4518.999 kb on + strandat 4519.007 kb on - strandat 4519.007 kb on - strandat 4519.067 kb on + strandat 4519.068 kb on - strandat 4519.075 kb on - strandat 4519.078 kb on + strandat 4519.078 kb on + strandat 4519.078 kb on + strandat 4519.131 kb on - strandat 4519.131 kb on - strandat 4519.225 kb on + strand, within MPMX20_04324at 4519.230 kb on + strand, within MPMX20_04324at 4519.230 kb on + strand, within MPMX20_04324at 4519.233 kb on - strand, within MPMX20_04324at 4519.256 kb on - strand, within MPMX20_04324at 4519.339 kb on + strand, within MPMX20_04324at 4519.378 kb on + strand, within MPMX20_04324at 4519.397 kb on + strand, within MPMX20_04324at 4519.397 kb on + strand, within MPMX20_04324at 4519.403 kb on + strand, within MPMX20_04324at 4519.440 kb on + strand, within MPMX20_04324at 4519.503 kb on - strand, within MPMX20_04324at 4519.530 kb on - strandat 4519.591 kb on + strandat 4519.633 kb on + strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.692 kb on - strand, within MPMX20_04325at 4519.696 kb on + strand, within MPMX20_04325at 4519.742 kb on - strand, within MPMX20_04325at 4519.747 kb on - strand, within MPMX20_04325at 4519.747 kb on - strand, within MPMX20_04325at 4519.852 kb on - strand, within MPMX20_04325at 4519.885 kb on - strand, within MPMX20_04325at 4519.951 kb on - strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,516,307 + MPMX20_04321 0.86 +1.1
4,516,315 - MPMX20_04321 0.87 -0.2
4,516,315 - MPMX20_04321 0.87 -1.8
4,516,379 + +2.0
4,516,387 - +0.1
4,516,389 + +0.3
4,516,439 + -0.8
4,516,461 + -0.6
4,516,506 + +0.2
4,516,506 + -0.4
4,516,506 + +0.8
4,516,514 - -0.1
4,516,556 + -0.1
4,516,564 - -0.1
4,516,566 + -1.5
4,516,566 + -0.1
4,516,566 + +0.7
4,516,579 - +0.3
4,516,597 + +1.4
4,516,622 - +1.4
4,516,624 - -0.8
4,516,832 - MPMX20_04322 0.15 -1.5
4,516,834 - MPMX20_04322 0.15 -0.5
4,516,847 + MPMX20_04322 0.18 -1.3
4,516,855 - MPMX20_04322 0.20 -0.1
4,516,855 - MPMX20_04322 0.20 -1.2
4,516,855 - MPMX20_04322 0.20 +0.5
4,516,902 + MPMX20_04322 0.29 +0.2
4,516,928 + MPMX20_04322 0.35 +1.0
4,516,928 + MPMX20_04322 0.35 +1.7
4,516,936 - MPMX20_04322 0.36 +1.6
4,517,006 + MPMX20_04322 0.51 -1.1
4,517,048 - MPMX20_04322 0.59 -0.9
4,517,189 + MPMX20_04322 0.88 -0.2
4,517,199 + -0.4
4,517,199 + -0.5
4,517,199 + -0.8
4,517,199 + -1.4
4,517,199 + +0.4
4,517,207 - -0.0
4,517,217 - -0.1
4,517,325 - +0.4
4,517,338 - -1.1
4,517,338 - -0.3
4,517,358 + +0.3
4,517,373 - -0.6
4,517,432 - -0.2
4,517,551 + MPMX20_04323 0.15 -0.1
4,517,575 + MPMX20_04323 0.16 -0.4
4,517,580 + MPMX20_04323 0.17 -0.3
4,517,590 + MPMX20_04323 0.17 -0.1
4,517,623 - MPMX20_04323 0.19 +0.8
4,517,802 + MPMX20_04323 0.29 +0.3
4,517,802 + MPMX20_04323 0.29 +1.1
4,517,810 - MPMX20_04323 0.30 -0.4
4,517,810 - MPMX20_04323 0.30 +9.5
4,517,810 - MPMX20_04323 0.30 -0.1
4,517,810 - MPMX20_04323 0.30 +1.4
4,517,817 - MPMX20_04323 0.30 -0.5
4,517,830 - MPMX20_04323 0.31 +0.3
4,517,851 - MPMX20_04323 0.32 +1.4
4,517,884 - MPMX20_04323 0.34 -0.7
4,517,885 - MPMX20_04323 0.34 -0.2
4,517,970 + MPMX20_04323 0.39 -0.2
4,518,058 - MPMX20_04323 0.44 -1.0
4,518,074 - MPMX20_04323 0.45 +0.1
4,518,215 + MPMX20_04323 0.53 -1.2
4,518,223 - MPMX20_04323 0.54 +0.3
4,518,223 - MPMX20_04323 0.54 -1.0
4,518,223 - MPMX20_04323 0.54 +2.7
4,518,223 - MPMX20_04323 0.54 -0.7
4,518,223 - MPMX20_04323 0.54 +0.7
4,518,225 - MPMX20_04323 0.54 +0.6
4,518,309 + MPMX20_04323 0.59 +0.4
4,518,309 + MPMX20_04323 0.59 -0.4
4,518,317 - MPMX20_04323 0.59 +0.4
4,518,333 + MPMX20_04323 0.60 +0.3
4,518,374 + MPMX20_04323 0.62 +1.4
4,518,382 - MPMX20_04323 0.63 -0.2
4,518,483 + MPMX20_04323 0.68 -0.3
4,518,519 + MPMX20_04323 0.71 -0.7
4,518,680 - MPMX20_04323 0.80 -0.2
4,518,780 - MPMX20_04323 0.86 +0.8
4,518,791 - MPMX20_04323 0.86 -0.4
4,518,816 + MPMX20_04323 0.88 -1.4
4,518,849 + MPMX20_04323 0.89 -1.9
4,518,878 + -0.2
4,518,878 + +0.3
4,518,878 + +0.5
4,518,883 + -1.6
4,518,886 - +0.7
4,518,886 - +2.0
4,518,974 - -0.6
4,518,999 + -0.6
4,518,999 + +0.9
4,519,007 - -0.6
4,519,007 - -0.7
4,519,067 + -0.2
4,519,068 - -1.4
4,519,075 - -1.2
4,519,078 + -0.1
4,519,078 + -0.5
4,519,078 + -1.6
4,519,131 - -0.3
4,519,131 - +0.1
4,519,225 + MPMX20_04324 0.18 -0.3
4,519,230 + MPMX20_04324 0.19 +0.1
4,519,230 + MPMX20_04324 0.19 +0.9
4,519,233 - MPMX20_04324 0.20 -0.6
4,519,256 - MPMX20_04324 0.26 -0.7
4,519,339 + MPMX20_04324 0.47 -0.6
4,519,378 + MPMX20_04324 0.57 -0.2
4,519,397 + MPMX20_04324 0.62 -0.9
4,519,397 + MPMX20_04324 0.62 +0.2
4,519,403 + MPMX20_04324 0.64 +0.6
4,519,440 + MPMX20_04324 0.73 +0.8
4,519,503 - MPMX20_04324 0.89 +3.2
4,519,530 - -0.1
4,519,591 + +0.3
4,519,633 + MPMX20_04325 0.15 -0.2
4,519,641 - MPMX20_04325 0.16 -1.9
4,519,641 - MPMX20_04325 0.16 -0.7
4,519,641 - MPMX20_04325 0.16 +0.2
4,519,692 - MPMX20_04325 0.22 -0.2
4,519,696 + MPMX20_04325 0.23 +0.3
4,519,742 - MPMX20_04325 0.29 -1.2
4,519,747 - MPMX20_04325 0.30 +1.0
4,519,747 - MPMX20_04325 0.30 -0.9
4,519,852 - MPMX20_04325 0.44 -0.9
4,519,885 - MPMX20_04325 0.48 -0.1
4,519,951 - MPMX20_04325 0.57 +1.0
4,520,002 + MPMX20_04325 0.64 -0.4
4,520,002 + MPMX20_04325 0.64 -0.8
4,520,002 + MPMX20_04325 0.64 -1.1

Or see this region's nucleotide sequence