Experiment: 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03482 and MPMX20_03483 are separated by 51 nucleotides MPMX20_03483 and MPMX20_03484 overlap by 8 nucleotides MPMX20_03484 and MPMX20_03485 are separated by 22 nucleotides
MPMX20_03482: MPMX20_03482 - hypothetical protein, at 3,671,333 to 3,672,574
_03482
MPMX20_03483: MPMX20_03483 - Protein GrpE, at 3,672,626 to 3,673,219
_03483
MPMX20_03484: MPMX20_03484 - hypothetical protein, at 3,673,212 to 3,673,319
_03484
MPMX20_03485: MPMX20_03485 - NAD kinase, at 3,673,342 to 3,674,220
_03485
Position (kb)
3672
3673
3674 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3671.690 kb on - strand, within MPMX20_03482 at 3671.779 kb on - strand, within MPMX20_03482 at 3671.782 kb on - strand, within MPMX20_03482 at 3671.787 kb on - strand, within MPMX20_03482 at 3671.895 kb on + strand, within MPMX20_03482 at 3671.960 kb on + strand, within MPMX20_03482 at 3671.977 kb on + strand, within MPMX20_03482 at 3671.997 kb on + strand, within MPMX20_03482 at 3672.000 kb on - strand, within MPMX20_03482 at 3672.153 kb on + strand, within MPMX20_03482 at 3672.153 kb on + strand, within MPMX20_03482 at 3672.184 kb on + strand, within MPMX20_03482 at 3672.375 kb on - strand, within MPMX20_03482 at 3672.411 kb on + strand, within MPMX20_03482 at 3672.411 kb on + strand, within MPMX20_03482 at 3672.471 kb on + strand at 3672.526 kb on + strand at 3672.534 kb on - strand at 3672.561 kb on + strand at 3672.561 kb on + strand at 3672.566 kb on + strand at 3672.569 kb on - strand at 3672.569 kb on - strand at 3672.569 kb on - strand at 3672.571 kb on + strand at 3672.571 kb on + strand at 3672.579 kb on - strand at 3672.579 kb on - strand at 3672.579 kb on - strand at 3672.579 kb on - strand at 3672.579 kb on - strand at 3672.584 kb on - strand at 3673.308 kb on + strand, within MPMX20_03484 at 3673.330 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,671,690 - MPMX20_03482 0.29 -0.3 3,671,779 - MPMX20_03482 0.36 +0.8 3,671,782 - MPMX20_03482 0.36 +2.1 3,671,787 - MPMX20_03482 0.37 -0.1 3,671,895 + MPMX20_03482 0.45 -0.4 3,671,960 + MPMX20_03482 0.50 +0.4 3,671,977 + MPMX20_03482 0.52 +5.3 3,671,997 + MPMX20_03482 0.53 +1.3 3,672,000 - MPMX20_03482 0.54 +1.3 3,672,153 + MPMX20_03482 0.66 +0.9 3,672,153 + MPMX20_03482 0.66 +0.3 3,672,184 + MPMX20_03482 0.69 -0.6 3,672,375 - MPMX20_03482 0.84 +0.4 3,672,411 + MPMX20_03482 0.87 +0.7 3,672,411 + MPMX20_03482 0.87 -0.2 3,672,471 + +0.6 3,672,526 + +0.0 3,672,534 - -0.3 3,672,561 + +0.3 3,672,561 + -0.1 3,672,566 + -1.6 3,672,569 - -3.4 3,672,569 - +0.3 3,672,569 - +0.5 3,672,571 + -0.9 3,672,571 + -0.7 3,672,579 - +0.3 3,672,579 - +0.1 3,672,579 - -0.3 3,672,579 - +0.9 3,672,579 - -0.1 3,672,584 - -1.4 3,673,308 + MPMX20_03484 0.89 +1.2 3,673,330 - +1.4
Or see this region's nucleotide sequence