Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03483

Experiment: 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03482 and MPMX20_03483 are separated by 51 nucleotidesMPMX20_03483 and MPMX20_03484 overlap by 8 nucleotidesMPMX20_03484 and MPMX20_03485 are separated by 22 nucleotides MPMX20_03482: MPMX20_03482 - hypothetical protein, at 3,671,333 to 3,672,574 _03482 MPMX20_03483: MPMX20_03483 - Protein GrpE, at 3,672,626 to 3,673,219 _03483 MPMX20_03484: MPMX20_03484 - hypothetical protein, at 3,673,212 to 3,673,319 _03484 MPMX20_03485: MPMX20_03485 - NAD kinase, at 3,673,342 to 3,674,220 _03485 Position (kb) 3672 3673 3674Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 3671.690 kb on - strand, within MPMX20_03482at 3671.779 kb on - strand, within MPMX20_03482at 3671.782 kb on - strand, within MPMX20_03482at 3671.787 kb on - strand, within MPMX20_03482at 3671.895 kb on + strand, within MPMX20_03482at 3671.960 kb on + strand, within MPMX20_03482at 3671.977 kb on + strand, within MPMX20_03482at 3671.997 kb on + strand, within MPMX20_03482at 3672.000 kb on - strand, within MPMX20_03482at 3672.153 kb on + strand, within MPMX20_03482at 3672.153 kb on + strand, within MPMX20_03482at 3672.184 kb on + strand, within MPMX20_03482at 3672.375 kb on - strand, within MPMX20_03482at 3672.411 kb on + strand, within MPMX20_03482at 3672.411 kb on + strand, within MPMX20_03482at 3672.471 kb on + strandat 3672.526 kb on + strandat 3672.534 kb on - strandat 3672.561 kb on + strandat 3672.561 kb on + strandat 3672.566 kb on + strandat 3672.569 kb on - strandat 3672.569 kb on - strandat 3672.569 kb on - strandat 3672.571 kb on + strandat 3672.571 kb on + strandat 3672.579 kb on - strandat 3672.579 kb on - strandat 3672.579 kb on - strandat 3672.579 kb on - strandat 3672.579 kb on - strandat 3672.584 kb on - strandat 3673.308 kb on + strand, within MPMX20_03484at 3673.330 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,671,690 - MPMX20_03482 0.29 -0.3
3,671,779 - MPMX20_03482 0.36 +0.8
3,671,782 - MPMX20_03482 0.36 +2.1
3,671,787 - MPMX20_03482 0.37 -0.1
3,671,895 + MPMX20_03482 0.45 -0.4
3,671,960 + MPMX20_03482 0.50 +0.4
3,671,977 + MPMX20_03482 0.52 +5.3
3,671,997 + MPMX20_03482 0.53 +1.3
3,672,000 - MPMX20_03482 0.54 +1.3
3,672,153 + MPMX20_03482 0.66 +0.9
3,672,153 + MPMX20_03482 0.66 +0.3
3,672,184 + MPMX20_03482 0.69 -0.6
3,672,375 - MPMX20_03482 0.84 +0.4
3,672,411 + MPMX20_03482 0.87 +0.7
3,672,411 + MPMX20_03482 0.87 -0.2
3,672,471 + +0.6
3,672,526 + +0.0
3,672,534 - -0.3
3,672,561 + +0.3
3,672,561 + -0.1
3,672,566 + -1.6
3,672,569 - -3.4
3,672,569 - +0.3
3,672,569 - +0.5
3,672,571 + -0.9
3,672,571 + -0.7
3,672,579 - +0.3
3,672,579 - +0.1
3,672,579 - -0.3
3,672,579 - +0.9
3,672,579 - -0.1
3,672,584 - -1.4
3,673,308 + MPMX20_03484 0.89 +1.2
3,673,330 - +1.4

Or see this region's nucleotide sequence