Experiment: TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04324 and MPMX20_04325 overlap by 20 nucleotides MPMX20_04325 and MPMX20_04326 overlap by 4 nucleotides MPMX20_04326 and MPMX20_04327 are separated by 1 nucleotides MPMX20_04327 and MPMX20_04328 overlap by 4 nucleotides
MPMX20_04324: MPMX20_04324 - putative protein YhhA, at 4,519,157 to 4,519,543
_04324
MPMX20_04325: MPMX20_04325 - Glycerophosphodiester phosphodiesterase, cytoplasmic, at 4,519,524 to 4,520,273
_04325
MPMX20_04326: MPMX20_04326 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 4,520,270 to 4,521,340
_04326
MPMX20_04327: MPMX20_04327 - Lactose transport system permease protein LacG, at 4,521,342 to 4,522,187
_04327
MPMX20_04328: MPMX20_04328 - sn-glycerol-3-phosphate transport system permease protein UgpA, at 4,522,184 to 4,523,071
_04328
Position (kb)
4520
4521
4522 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4519.339 kb on + strand, within MPMX20_04324 at 4519.378 kb on + strand, within MPMX20_04324 at 4519.397 kb on + strand, within MPMX20_04324 at 4519.397 kb on + strand, within MPMX20_04324 at 4519.403 kb on + strand, within MPMX20_04324 at 4519.440 kb on + strand, within MPMX20_04324 at 4519.503 kb on - strand, within MPMX20_04324 at 4519.530 kb on - strand at 4519.591 kb on + strand at 4519.633 kb on + strand, within MPMX20_04325 at 4519.641 kb on - strand, within MPMX20_04325 at 4519.641 kb on - strand, within MPMX20_04325 at 4519.641 kb on - strand, within MPMX20_04325 at 4519.692 kb on - strand, within MPMX20_04325 at 4519.696 kb on + strand, within MPMX20_04325 at 4519.742 kb on - strand, within MPMX20_04325 at 4519.747 kb on - strand, within MPMX20_04325 at 4519.747 kb on - strand, within MPMX20_04325 at 4519.852 kb on - strand, within MPMX20_04325 at 4519.885 kb on - strand, within MPMX20_04325 at 4519.951 kb on - strand, within MPMX20_04325 at 4520.002 kb on + strand, within MPMX20_04325 at 4520.002 kb on + strand, within MPMX20_04325 at 4520.002 kb on + strand, within MPMX20_04325 at 4520.089 kb on - strand, within MPMX20_04325 at 4520.094 kb on + strand, within MPMX20_04325 at 4520.230 kb on - strand at 4520.286 kb on - strand at 4520.346 kb on + strand at 4520.346 kb on + strand at 4520.346 kb on + strand at 4520.354 kb on - strand at 4520.354 kb on - strand at 4520.354 kb on - strand at 4520.394 kb on + strand, within MPMX20_04326 at 4520.421 kb on + strand, within MPMX20_04326 at 4520.431 kb on + strand, within MPMX20_04326 at 4520.442 kb on + strand, within MPMX20_04326 at 4520.471 kb on - strand, within MPMX20_04326 at 4520.478 kb on - strand, within MPMX20_04326 at 4520.479 kb on - strand, within MPMX20_04326 at 4520.565 kb on - strand, within MPMX20_04326 at 4520.734 kb on + strand, within MPMX20_04326 at 4520.742 kb on - strand, within MPMX20_04326 at 4520.812 kb on + strand, within MPMX20_04326 at 4520.868 kb on + strand, within MPMX20_04326 at 4520.878 kb on + strand, within MPMX20_04326 at 4520.924 kb on - strand, within MPMX20_04326 at 4520.924 kb on - strand, within MPMX20_04326 at 4520.924 kb on - strand, within MPMX20_04326 at 4520.924 kb on - strand, within MPMX20_04326 at 4520.938 kb on + strand, within MPMX20_04326 at 4520.971 kb on + strand, within MPMX20_04326 at 4521.119 kb on - strand, within MPMX20_04326 at 4521.132 kb on - strand, within MPMX20_04326 at 4521.170 kb on + strand, within MPMX20_04326 at 4521.223 kb on - strand, within MPMX20_04326 at 4521.289 kb on + strand at 4521.341 kb on - strand at 4521.410 kb on + strand at 4521.410 kb on + strand at 4521.418 kb on - strand at 4521.423 kb on - strand at 4521.453 kb on - strand, within MPMX20_04327 at 4521.548 kb on + strand, within MPMX20_04327 at 4521.548 kb on + strand, within MPMX20_04327 at 4521.560 kb on + strand, within MPMX20_04327 at 4521.661 kb on + strand, within MPMX20_04327 at 4521.661 kb on + strand, within MPMX20_04327 at 4521.741 kb on + strand, within MPMX20_04327 at 4521.741 kb on + strand, within MPMX20_04327 at 4521.741 kb on + strand, within MPMX20_04327 at 4521.741 kb on + strand, within MPMX20_04327 at 4521.741 kb on + strand, within MPMX20_04327 at 4521.741 kb on + strand, within MPMX20_04327 at 4521.741 kb on + strand, within MPMX20_04327 at 4521.749 kb on - strand, within MPMX20_04327 at 4521.749 kb on - strand, within MPMX20_04327 at 4521.749 kb on - strand, within MPMX20_04327 at 4521.749 kb on - strand, within MPMX20_04327 at 4521.774 kb on - strand, within MPMX20_04327 at 4521.801 kb on + strand, within MPMX20_04327 at 4521.853 kb on + strand, within MPMX20_04327 at 4521.863 kb on + strand, within MPMX20_04327 at 4521.871 kb on - strand, within MPMX20_04327 at 4521.908 kb on + strand, within MPMX20_04327 at 4521.923 kb on + strand, within MPMX20_04327 at 4521.923 kb on + strand, within MPMX20_04327 at 4521.931 kb on - strand, within MPMX20_04327 at 4521.931 kb on - strand, within MPMX20_04327 at 4521.931 kb on - strand, within MPMX20_04327 at 4521.981 kb on + strand, within MPMX20_04327 at 4521.994 kb on + strand, within MPMX20_04327 at 4521.996 kb on - strand, within MPMX20_04327 at 4522.017 kb on - strand, within MPMX20_04327 at 4522.036 kb on + strand, within MPMX20_04327 at 4522.036 kb on + strand, within MPMX20_04327 at 4522.075 kb on - strand, within MPMX20_04327 at 4522.166 kb on + strand at 4522.210 kb on - strand at 4522.230 kb on - strand at 4522.337 kb on + strand, within MPMX20_04328
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,519,339 + MPMX20_04324 0.47 +0.1 4,519,378 + MPMX20_04324 0.57 +2.3 4,519,397 + MPMX20_04324 0.62 -1.2 4,519,397 + MPMX20_04324 0.62 -1.0 4,519,403 + MPMX20_04324 0.64 +1.0 4,519,440 + MPMX20_04324 0.73 -1.3 4,519,503 - MPMX20_04324 0.89 +0.0 4,519,530 - +0.3 4,519,591 + -0.8 4,519,633 + MPMX20_04325 0.15 -0.3 4,519,641 - MPMX20_04325 0.16 -1.4 4,519,641 - MPMX20_04325 0.16 -0.7 4,519,641 - MPMX20_04325 0.16 -0.5 4,519,692 - MPMX20_04325 0.22 +0.3 4,519,696 + MPMX20_04325 0.23 -0.2 4,519,742 - MPMX20_04325 0.29 -0.3 4,519,747 - MPMX20_04325 0.30 +0.6 4,519,747 - MPMX20_04325 0.30 +0.0 4,519,852 - MPMX20_04325 0.44 -1.0 4,519,885 - MPMX20_04325 0.48 -0.7 4,519,951 - MPMX20_04325 0.57 +1.2 4,520,002 + MPMX20_04325 0.64 -1.1 4,520,002 + MPMX20_04325 0.64 +0.3 4,520,002 + MPMX20_04325 0.64 -2.9 4,520,089 - MPMX20_04325 0.75 +0.6 4,520,094 + MPMX20_04325 0.76 -0.1 4,520,230 - -1.3 4,520,286 - +0.3 4,520,346 + -1.2 4,520,346 + +0.6 4,520,346 + -2.0 4,520,354 - -2.0 4,520,354 - -0.7 4,520,354 - +0.0 4,520,394 + MPMX20_04326 0.12 -0.8 4,520,421 + MPMX20_04326 0.14 -0.0 4,520,431 + MPMX20_04326 0.15 -0.8 4,520,442 + MPMX20_04326 0.16 -0.5 4,520,471 - MPMX20_04326 0.19 +0.1 4,520,478 - MPMX20_04326 0.19 +1.3 4,520,479 - MPMX20_04326 0.20 -1.0 4,520,565 - MPMX20_04326 0.28 -0.2 4,520,734 + MPMX20_04326 0.43 -0.2 4,520,742 - MPMX20_04326 0.44 -1.4 4,520,812 + MPMX20_04326 0.51 -1.1 4,520,868 + MPMX20_04326 0.56 +0.5 4,520,878 + MPMX20_04326 0.57 -1.4 4,520,924 - MPMX20_04326 0.61 -1.3 4,520,924 - MPMX20_04326 0.61 +0.4 4,520,924 - MPMX20_04326 0.61 -0.2 4,520,924 - MPMX20_04326 0.61 -0.4 4,520,938 + MPMX20_04326 0.62 +0.5 4,520,971 + MPMX20_04326 0.65 -0.6 4,521,119 - MPMX20_04326 0.79 -0.6 4,521,132 - MPMX20_04326 0.80 -0.2 4,521,170 + MPMX20_04326 0.84 -1.3 4,521,223 - MPMX20_04326 0.89 +1.1 4,521,289 + +0.2 4,521,341 - -0.2 4,521,410 + +0.9 4,521,410 + +0.6 4,521,418 - +0.5 4,521,423 - +0.1 4,521,453 - MPMX20_04327 0.13 -1.0 4,521,548 + MPMX20_04327 0.24 +0.0 4,521,548 + MPMX20_04327 0.24 +0.1 4,521,560 + MPMX20_04327 0.26 +3.9 4,521,661 + MPMX20_04327 0.38 +3.0 4,521,661 + MPMX20_04327 0.38 -0.3 4,521,741 + MPMX20_04327 0.47 +0.3 4,521,741 + MPMX20_04327 0.47 +0.3 4,521,741 + MPMX20_04327 0.47 -0.8 4,521,741 + MPMX20_04327 0.47 -2.5 4,521,741 + MPMX20_04327 0.47 +0.3 4,521,741 + MPMX20_04327 0.47 +0.1 4,521,741 + MPMX20_04327 0.47 -0.2 4,521,749 - MPMX20_04327 0.48 -0.7 4,521,749 - MPMX20_04327 0.48 +0.3 4,521,749 - MPMX20_04327 0.48 +0.6 4,521,749 - MPMX20_04327 0.48 +1.0 4,521,774 - MPMX20_04327 0.51 -0.1 4,521,801 + MPMX20_04327 0.54 +1.1 4,521,853 + MPMX20_04327 0.60 -1.5 4,521,863 + MPMX20_04327 0.62 +0.2 4,521,871 - MPMX20_04327 0.63 -0.8 4,521,908 + MPMX20_04327 0.67 +0.1 4,521,923 + MPMX20_04327 0.69 +1.3 4,521,923 + MPMX20_04327 0.69 +1.3 4,521,931 - MPMX20_04327 0.70 -1.7 4,521,931 - MPMX20_04327 0.70 -0.5 4,521,931 - MPMX20_04327 0.70 -0.4 4,521,981 + MPMX20_04327 0.76 -0.6 4,521,994 + MPMX20_04327 0.77 -0.5 4,521,996 - MPMX20_04327 0.77 +1.6 4,522,017 - MPMX20_04327 0.80 -0.2 4,522,036 + MPMX20_04327 0.82 -0.8 4,522,036 + MPMX20_04327 0.82 +0.5 4,522,075 - MPMX20_04327 0.87 +0.1 4,522,166 + +1.5 4,522,210 - -0.4 4,522,230 - -0.6 4,522,337 + MPMX20_04328 0.17 -0.7
Or see this region's nucleotide sequence