Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04326

Experiment: TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04324 and MPMX20_04325 overlap by 20 nucleotidesMPMX20_04325 and MPMX20_04326 overlap by 4 nucleotidesMPMX20_04326 and MPMX20_04327 are separated by 1 nucleotidesMPMX20_04327 and MPMX20_04328 overlap by 4 nucleotides MPMX20_04324: MPMX20_04324 - putative protein YhhA, at 4,519,157 to 4,519,543 _04324 MPMX20_04325: MPMX20_04325 - Glycerophosphodiester phosphodiesterase, cytoplasmic, at 4,519,524 to 4,520,273 _04325 MPMX20_04326: MPMX20_04326 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 4,520,270 to 4,521,340 _04326 MPMX20_04327: MPMX20_04327 - Lactose transport system permease protein LacG, at 4,521,342 to 4,522,187 _04327 MPMX20_04328: MPMX20_04328 - sn-glycerol-3-phosphate transport system permease protein UgpA, at 4,522,184 to 4,523,071 _04328 Position (kb) 4520 4521 4522Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4519.339 kb on + strand, within MPMX20_04324at 4519.378 kb on + strand, within MPMX20_04324at 4519.397 kb on + strand, within MPMX20_04324at 4519.397 kb on + strand, within MPMX20_04324at 4519.403 kb on + strand, within MPMX20_04324at 4519.440 kb on + strand, within MPMX20_04324at 4519.503 kb on - strand, within MPMX20_04324at 4519.530 kb on - strandat 4519.591 kb on + strandat 4519.633 kb on + strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.692 kb on - strand, within MPMX20_04325at 4519.696 kb on + strand, within MPMX20_04325at 4519.742 kb on - strand, within MPMX20_04325at 4519.747 kb on - strand, within MPMX20_04325at 4519.747 kb on - strand, within MPMX20_04325at 4519.852 kb on - strand, within MPMX20_04325at 4519.885 kb on - strand, within MPMX20_04325at 4519.951 kb on - strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.089 kb on - strand, within MPMX20_04325at 4520.094 kb on + strand, within MPMX20_04325at 4520.230 kb on - strandat 4520.286 kb on - strandat 4520.346 kb on + strandat 4520.346 kb on + strandat 4520.346 kb on + strandat 4520.354 kb on - strandat 4520.354 kb on - strandat 4520.354 kb on - strandat 4520.394 kb on + strand, within MPMX20_04326at 4520.421 kb on + strand, within MPMX20_04326at 4520.431 kb on + strand, within MPMX20_04326at 4520.442 kb on + strand, within MPMX20_04326at 4520.471 kb on - strand, within MPMX20_04326at 4520.478 kb on - strand, within MPMX20_04326at 4520.479 kb on - strand, within MPMX20_04326at 4520.565 kb on - strand, within MPMX20_04326at 4520.734 kb on + strand, within MPMX20_04326at 4520.742 kb on - strand, within MPMX20_04326at 4520.812 kb on + strand, within MPMX20_04326at 4520.868 kb on + strand, within MPMX20_04326at 4520.878 kb on + strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.938 kb on + strand, within MPMX20_04326at 4520.971 kb on + strand, within MPMX20_04326at 4521.119 kb on - strand, within MPMX20_04326at 4521.132 kb on - strand, within MPMX20_04326at 4521.170 kb on + strand, within MPMX20_04326at 4521.223 kb on - strand, within MPMX20_04326at 4521.289 kb on + strandat 4521.341 kb on - strandat 4521.410 kb on + strandat 4521.410 kb on + strandat 4521.418 kb on - strandat 4521.423 kb on - strandat 4521.453 kb on - strand, within MPMX20_04327at 4521.548 kb on + strand, within MPMX20_04327at 4521.548 kb on + strand, within MPMX20_04327at 4521.560 kb on + strand, within MPMX20_04327at 4521.661 kb on + strand, within MPMX20_04327at 4521.661 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.749 kb on - strand, within MPMX20_04327at 4521.749 kb on - strand, within MPMX20_04327at 4521.749 kb on - strand, within MPMX20_04327at 4521.749 kb on - strand, within MPMX20_04327at 4521.774 kb on - strand, within MPMX20_04327at 4521.801 kb on + strand, within MPMX20_04327at 4521.853 kb on + strand, within MPMX20_04327at 4521.863 kb on + strand, within MPMX20_04327at 4521.871 kb on - strand, within MPMX20_04327at 4521.908 kb on + strand, within MPMX20_04327at 4521.923 kb on + strand, within MPMX20_04327at 4521.923 kb on + strand, within MPMX20_04327at 4521.931 kb on - strand, within MPMX20_04327at 4521.931 kb on - strand, within MPMX20_04327at 4521.931 kb on - strand, within MPMX20_04327at 4521.981 kb on + strand, within MPMX20_04327at 4521.994 kb on + strand, within MPMX20_04327at 4521.996 kb on - strand, within MPMX20_04327at 4522.017 kb on - strand, within MPMX20_04327at 4522.036 kb on + strand, within MPMX20_04327at 4522.036 kb on + strand, within MPMX20_04327at 4522.075 kb on - strand, within MPMX20_04327at 4522.166 kb on + strandat 4522.210 kb on - strandat 4522.230 kb on - strandat 4522.337 kb on + strand, within MPMX20_04328

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,519,339 + MPMX20_04324 0.47 +0.1
4,519,378 + MPMX20_04324 0.57 +2.3
4,519,397 + MPMX20_04324 0.62 -1.2
4,519,397 + MPMX20_04324 0.62 -1.0
4,519,403 + MPMX20_04324 0.64 +1.0
4,519,440 + MPMX20_04324 0.73 -1.3
4,519,503 - MPMX20_04324 0.89 +0.0
4,519,530 - +0.3
4,519,591 + -0.8
4,519,633 + MPMX20_04325 0.15 -0.3
4,519,641 - MPMX20_04325 0.16 -1.4
4,519,641 - MPMX20_04325 0.16 -0.7
4,519,641 - MPMX20_04325 0.16 -0.5
4,519,692 - MPMX20_04325 0.22 +0.3
4,519,696 + MPMX20_04325 0.23 -0.2
4,519,742 - MPMX20_04325 0.29 -0.3
4,519,747 - MPMX20_04325 0.30 +0.6
4,519,747 - MPMX20_04325 0.30 +0.0
4,519,852 - MPMX20_04325 0.44 -1.0
4,519,885 - MPMX20_04325 0.48 -0.7
4,519,951 - MPMX20_04325 0.57 +1.2
4,520,002 + MPMX20_04325 0.64 -1.1
4,520,002 + MPMX20_04325 0.64 +0.3
4,520,002 + MPMX20_04325 0.64 -2.9
4,520,089 - MPMX20_04325 0.75 +0.6
4,520,094 + MPMX20_04325 0.76 -0.1
4,520,230 - -1.3
4,520,286 - +0.3
4,520,346 + -1.2
4,520,346 + +0.6
4,520,346 + -2.0
4,520,354 - -2.0
4,520,354 - -0.7
4,520,354 - +0.0
4,520,394 + MPMX20_04326 0.12 -0.8
4,520,421 + MPMX20_04326 0.14 -0.0
4,520,431 + MPMX20_04326 0.15 -0.8
4,520,442 + MPMX20_04326 0.16 -0.5
4,520,471 - MPMX20_04326 0.19 +0.1
4,520,478 - MPMX20_04326 0.19 +1.3
4,520,479 - MPMX20_04326 0.20 -1.0
4,520,565 - MPMX20_04326 0.28 -0.2
4,520,734 + MPMX20_04326 0.43 -0.2
4,520,742 - MPMX20_04326 0.44 -1.4
4,520,812 + MPMX20_04326 0.51 -1.1
4,520,868 + MPMX20_04326 0.56 +0.5
4,520,878 + MPMX20_04326 0.57 -1.4
4,520,924 - MPMX20_04326 0.61 -1.3
4,520,924 - MPMX20_04326 0.61 +0.4
4,520,924 - MPMX20_04326 0.61 -0.2
4,520,924 - MPMX20_04326 0.61 -0.4
4,520,938 + MPMX20_04326 0.62 +0.5
4,520,971 + MPMX20_04326 0.65 -0.6
4,521,119 - MPMX20_04326 0.79 -0.6
4,521,132 - MPMX20_04326 0.80 -0.2
4,521,170 + MPMX20_04326 0.84 -1.3
4,521,223 - MPMX20_04326 0.89 +1.1
4,521,289 + +0.2
4,521,341 - -0.2
4,521,410 + +0.9
4,521,410 + +0.6
4,521,418 - +0.5
4,521,423 - +0.1
4,521,453 - MPMX20_04327 0.13 -1.0
4,521,548 + MPMX20_04327 0.24 +0.0
4,521,548 + MPMX20_04327 0.24 +0.1
4,521,560 + MPMX20_04327 0.26 +3.9
4,521,661 + MPMX20_04327 0.38 +3.0
4,521,661 + MPMX20_04327 0.38 -0.3
4,521,741 + MPMX20_04327 0.47 +0.3
4,521,741 + MPMX20_04327 0.47 +0.3
4,521,741 + MPMX20_04327 0.47 -0.8
4,521,741 + MPMX20_04327 0.47 -2.5
4,521,741 + MPMX20_04327 0.47 +0.3
4,521,741 + MPMX20_04327 0.47 +0.1
4,521,741 + MPMX20_04327 0.47 -0.2
4,521,749 - MPMX20_04327 0.48 -0.7
4,521,749 - MPMX20_04327 0.48 +0.3
4,521,749 - MPMX20_04327 0.48 +0.6
4,521,749 - MPMX20_04327 0.48 +1.0
4,521,774 - MPMX20_04327 0.51 -0.1
4,521,801 + MPMX20_04327 0.54 +1.1
4,521,853 + MPMX20_04327 0.60 -1.5
4,521,863 + MPMX20_04327 0.62 +0.2
4,521,871 - MPMX20_04327 0.63 -0.8
4,521,908 + MPMX20_04327 0.67 +0.1
4,521,923 + MPMX20_04327 0.69 +1.3
4,521,923 + MPMX20_04327 0.69 +1.3
4,521,931 - MPMX20_04327 0.70 -1.7
4,521,931 - MPMX20_04327 0.70 -0.5
4,521,931 - MPMX20_04327 0.70 -0.4
4,521,981 + MPMX20_04327 0.76 -0.6
4,521,994 + MPMX20_04327 0.77 -0.5
4,521,996 - MPMX20_04327 0.77 +1.6
4,522,017 - MPMX20_04327 0.80 -0.2
4,522,036 + MPMX20_04327 0.82 -0.8
4,522,036 + MPMX20_04327 0.82 +0.5
4,522,075 - MPMX20_04327 0.87 +0.1
4,522,166 + +1.5
4,522,210 - -0.4
4,522,230 - -0.6
4,522,337 + MPMX20_04328 0.17 -0.7

Or see this region's nucleotide sequence