Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02711

Experiment: TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02710 and MPMX20_02711 are separated by 44 nucleotidesMPMX20_02711 and MPMX20_02712 are separated by 169 nucleotidesMPMX20_02712 and MPMX20_02713 are separated by 37 nucleotides MPMX20_02710: MPMX20_02710 - Ribonuclease D, at 2,862,922 to 2,864,076 _02710 MPMX20_02711: MPMX20_02711 - Long-chain-fatty-acid--CoA ligase, at 2,864,121 to 2,865,839 _02711 MPMX20_02712: MPMX20_02712 - Outer membrane protein Slp, at 2,866,009 to 2,866,590 _02712 MPMX20_02713: MPMX20_02713 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,866,628 to 2,867,323 _02713 Position (kb) 2864 2865 2866Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10 11at 2863.172 kb on + strand, within MPMX20_02710at 2863.180 kb on - strand, within MPMX20_02710at 2863.227 kb on + strand, within MPMX20_02710at 2863.303 kb on - strand, within MPMX20_02710at 2863.313 kb on + strand, within MPMX20_02710at 2863.321 kb on - strand, within MPMX20_02710at 2863.321 kb on - strand, within MPMX20_02710at 2863.528 kb on + strand, within MPMX20_02710at 2863.574 kb on + strand, within MPMX20_02710at 2863.575 kb on + strand, within MPMX20_02710at 2863.614 kb on + strand, within MPMX20_02710at 2863.624 kb on - strand, within MPMX20_02710at 2863.677 kb on - strand, within MPMX20_02710at 2863.678 kb on - strand, within MPMX20_02710at 2863.698 kb on + strand, within MPMX20_02710at 2863.755 kb on + strand, within MPMX20_02710at 2863.838 kb on + strand, within MPMX20_02710at 2863.915 kb on - strand, within MPMX20_02710at 2863.922 kb on + strand, within MPMX20_02710at 2863.929 kb on + strand, within MPMX20_02710at 2863.997 kb on + strandat 2864.112 kb on + strandat 2864.119 kb on + strandat 2864.127 kb on - strandat 2864.223 kb on + strandat 2864.239 kb on - strandat 2864.257 kb on - strandat 2864.371 kb on + strand, within MPMX20_02711at 2864.379 kb on - strand, within MPMX20_02711at 2864.471 kb on - strand, within MPMX20_02711at 2864.551 kb on + strand, within MPMX20_02711at 2864.567 kb on + strand, within MPMX20_02711at 2864.576 kb on + strand, within MPMX20_02711at 2864.586 kb on + strand, within MPMX20_02711at 2864.602 kb on + strand, within MPMX20_02711at 2864.699 kb on + strand, within MPMX20_02711at 2864.707 kb on - strand, within MPMX20_02711at 2864.707 kb on - strand, within MPMX20_02711at 2864.707 kb on - strand, within MPMX20_02711at 2864.707 kb on - strand, within MPMX20_02711at 2864.709 kb on + strand, within MPMX20_02711at 2864.709 kb on + strand, within MPMX20_02711at 2864.740 kb on - strand, within MPMX20_02711at 2864.740 kb on - strand, within MPMX20_02711at 2864.740 kb on - strand, within MPMX20_02711at 2864.741 kb on - strand, within MPMX20_02711at 2864.820 kb on + strand, within MPMX20_02711at 2864.822 kb on + strand, within MPMX20_02711at 2864.826 kb on - strand, within MPMX20_02711at 2864.855 kb on + strand, within MPMX20_02711at 2864.872 kb on + strand, within MPMX20_02711at 2864.880 kb on - strand, within MPMX20_02711at 2864.895 kb on + strand, within MPMX20_02711at 2864.910 kb on - strand, within MPMX20_02711at 2864.937 kb on + strand, within MPMX20_02711at 2865.003 kb on + strand, within MPMX20_02711at 2865.096 kb on - strand, within MPMX20_02711at 2865.106 kb on - strand, within MPMX20_02711at 2865.117 kb on + strand, within MPMX20_02711at 2865.125 kb on + strand, within MPMX20_02711at 2865.147 kb on - strand, within MPMX20_02711at 2865.210 kb on + strand, within MPMX20_02711at 2865.218 kb on - strand, within MPMX20_02711at 2865.312 kb on + strand, within MPMX20_02711at 2865.318 kb on - strand, within MPMX20_02711at 2865.334 kb on + strand, within MPMX20_02711at 2865.506 kb on - strand, within MPMX20_02711at 2865.527 kb on - strand, within MPMX20_02711at 2865.544 kb on - strand, within MPMX20_02711at 2865.605 kb on - strand, within MPMX20_02711at 2865.639 kb on + strand, within MPMX20_02711at 2865.686 kb on - strandat 2865.692 kb on + strandat 2865.700 kb on - strandat 2865.705 kb on - strandat 2865.705 kb on - strandat 2865.746 kb on + strandat 2865.751 kb on + strandat 2865.751 kb on + strandat 2865.751 kb on + strandat 2865.751 kb on + strandat 2865.784 kb on + strandat 2865.786 kb on - strandat 2865.790 kb on + strandat 2865.790 kb on + strandat 2865.798 kb on - strandat 2865.814 kb on + strandat 2865.822 kb on - strandat 2865.822 kb on - strandat 2865.908 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.040 kb on + strandat 2866.043 kb on - strandat 2866.048 kb on - strandat 2866.094 kb on - strand, within MPMX20_02712at 2866.107 kb on - strand, within MPMX20_02712at 2866.223 kb on - strand, within MPMX20_02712at 2866.246 kb on + strand, within MPMX20_02712at 2866.254 kb on - strand, within MPMX20_02712at 2866.348 kb on - strand, within MPMX20_02712at 2866.390 kb on + strand, within MPMX20_02712at 2866.443 kb on + strand, within MPMX20_02712at 2866.451 kb on - strand, within MPMX20_02712at 2866.482 kb on + strand, within MPMX20_02712at 2866.533 kb on + strandat 2866.541 kb on - strandat 2866.541 kb on - strandat 2866.543 kb on - strandat 2866.564 kb on - strandat 2866.571 kb on + strandat 2866.571 kb on + strandat 2866.571 kb on + strandat 2866.579 kb on - strandat 2866.623 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,863,172 + MPMX20_02710 0.22 +1.6
2,863,180 - MPMX20_02710 0.22 -1.8
2,863,227 + MPMX20_02710 0.26 -0.0
2,863,303 - MPMX20_02710 0.33 -1.9
2,863,313 + MPMX20_02710 0.34 +2.0
2,863,321 - MPMX20_02710 0.35 -0.4
2,863,321 - MPMX20_02710 0.35 -1.9
2,863,528 + MPMX20_02710 0.52 -2.1
2,863,574 + MPMX20_02710 0.56 -0.7
2,863,575 + MPMX20_02710 0.57 -2.4
2,863,614 + MPMX20_02710 0.60 -0.8
2,863,624 - MPMX20_02710 0.61 +0.1
2,863,677 - MPMX20_02710 0.65 -1.3
2,863,678 - MPMX20_02710 0.65 -0.9
2,863,698 + MPMX20_02710 0.67 -2.3
2,863,755 + MPMX20_02710 0.72 +0.2
2,863,838 + MPMX20_02710 0.79 -2.0
2,863,915 - MPMX20_02710 0.86 -2.8
2,863,922 + MPMX20_02710 0.87 -1.1
2,863,929 + MPMX20_02710 0.87 -0.8
2,863,997 + +0.0
2,864,112 + +0.3
2,864,119 + -0.0
2,864,127 - -0.3
2,864,223 + +0.7
2,864,239 - -1.5
2,864,257 - +2.1
2,864,371 + MPMX20_02711 0.15 -0.5
2,864,379 - MPMX20_02711 0.15 -0.9
2,864,471 - MPMX20_02711 0.20 +0.5
2,864,551 + MPMX20_02711 0.25 +1.0
2,864,567 + MPMX20_02711 0.26 -0.0
2,864,576 + MPMX20_02711 0.26 +5.2
2,864,586 + MPMX20_02711 0.27 -2.5
2,864,602 + MPMX20_02711 0.28 -0.3
2,864,699 + MPMX20_02711 0.34 +1.4
2,864,707 - MPMX20_02711 0.34 -0.5
2,864,707 - MPMX20_02711 0.34 +0.0
2,864,707 - MPMX20_02711 0.34 -1.2
2,864,707 - MPMX20_02711 0.34 -0.4
2,864,709 + MPMX20_02711 0.34 -1.6
2,864,709 + MPMX20_02711 0.34 -0.5
2,864,740 - MPMX20_02711 0.36 +0.5
2,864,740 - MPMX20_02711 0.36 +0.2
2,864,740 - MPMX20_02711 0.36 -0.7
2,864,741 - MPMX20_02711 0.36 +0.2
2,864,820 + MPMX20_02711 0.41 -0.4
2,864,822 + MPMX20_02711 0.41 +1.0
2,864,826 - MPMX20_02711 0.41 +0.4
2,864,855 + MPMX20_02711 0.43 -0.2
2,864,872 + MPMX20_02711 0.44 -0.5
2,864,880 - MPMX20_02711 0.44 +11.7
2,864,895 + MPMX20_02711 0.45 -0.3
2,864,910 - MPMX20_02711 0.46 -0.6
2,864,937 + MPMX20_02711 0.47 -0.0
2,865,003 + MPMX20_02711 0.51 -0.7
2,865,096 - MPMX20_02711 0.57 -0.0
2,865,106 - MPMX20_02711 0.57 -0.7
2,865,117 + MPMX20_02711 0.58 +0.9
2,865,125 + MPMX20_02711 0.58 -0.8
2,865,147 - MPMX20_02711 0.60 +1.1
2,865,210 + MPMX20_02711 0.63 +1.3
2,865,218 - MPMX20_02711 0.64 +0.9
2,865,312 + MPMX20_02711 0.69 -0.6
2,865,318 - MPMX20_02711 0.70 +0.9
2,865,334 + MPMX20_02711 0.71 -0.9
2,865,506 - MPMX20_02711 0.81 -0.0
2,865,527 - MPMX20_02711 0.82 -0.4
2,865,544 - MPMX20_02711 0.83 -1.0
2,865,605 - MPMX20_02711 0.86 +0.5
2,865,639 + MPMX20_02711 0.88 +0.4
2,865,686 - -0.8
2,865,692 + -1.3
2,865,700 - -0.0
2,865,705 - +0.1
2,865,705 - -0.8
2,865,746 + -1.0
2,865,751 + +0.8
2,865,751 + +0.2
2,865,751 + +0.1
2,865,751 + +1.0
2,865,784 + +0.5
2,865,786 - -0.7
2,865,790 + +0.3
2,865,790 + +1.8
2,865,798 - -0.5
2,865,814 + -0.9
2,865,822 - -1.0
2,865,822 - -0.7
2,865,908 + -1.5
2,866,040 + -1.8
2,866,040 + +0.1
2,866,040 + -1.1
2,866,040 + +1.0
2,866,040 + +4.3
2,866,040 + -1.9
2,866,043 - -1.0
2,866,048 - -0.6
2,866,094 - MPMX20_02712 0.15 -1.1
2,866,107 - MPMX20_02712 0.17 +0.9
2,866,223 - MPMX20_02712 0.37 -1.0
2,866,246 + MPMX20_02712 0.41 -0.1
2,866,254 - MPMX20_02712 0.42 +2.5
2,866,348 - MPMX20_02712 0.58 -2.2
2,866,390 + MPMX20_02712 0.65 -0.5
2,866,443 + MPMX20_02712 0.75 +6.0
2,866,451 - MPMX20_02712 0.76 +0.1
2,866,482 + MPMX20_02712 0.81 +0.8
2,866,533 + -0.0
2,866,541 - -0.0
2,866,541 - -0.0
2,866,543 - +0.0
2,866,564 - -0.1
2,866,571 + -0.7
2,866,571 + -0.3
2,866,571 + -0.8
2,866,579 - -0.8
2,866,623 - +0.2

Or see this region's nucleotide sequence