Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02782

Experiment: M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02781 and MPMX20_02782 are separated by 264 nucleotidesMPMX20_02782 and MPMX20_02783 overlap by 1 nucleotides MPMX20_02781: MPMX20_02781 - Putative glycoside/cation symporter YagG, at 2,935,515 to 2,937,098 _02781 MPMX20_02782: MPMX20_02782 - Flagellar protein FlhE, at 2,937,363 to 2,937,755 _02782 MPMX20_02783: MPMX20_02783 - Flagellar biosynthesis protein FlhA, at 2,937,755 to 2,939,833 _02783 Position (kb) 2937 2938Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 2936.378 kb on + strand, within MPMX20_02781at 2936.380 kb on + strand, within MPMX20_02781at 2936.391 kb on - strand, within MPMX20_02781at 2936.464 kb on - strand, within MPMX20_02781at 2936.500 kb on + strand, within MPMX20_02781at 2936.531 kb on + strand, within MPMX20_02781at 2936.531 kb on + strand, within MPMX20_02781at 2936.537 kb on - strand, within MPMX20_02781at 2936.539 kb on - strand, within MPMX20_02781at 2936.544 kb on - strand, within MPMX20_02781at 2936.544 kb on - strand, within MPMX20_02781at 2936.549 kb on - strand, within MPMX20_02781at 2936.616 kb on + strand, within MPMX20_02781at 2936.664 kb on - strand, within MPMX20_02781at 2936.705 kb on + strand, within MPMX20_02781at 2936.757 kb on + strand, within MPMX20_02781at 2936.786 kb on + strand, within MPMX20_02781at 2936.973 kb on - strandat 2936.975 kb on + strandat 2937.102 kb on + strandat 2937.110 kb on - strandat 2937.110 kb on - strandat 2937.115 kb on - strandat 2937.115 kb on - strandat 2937.131 kb on + strandat 2937.136 kb on + strandat 2937.179 kb on - strandat 2937.187 kb on - strandat 2937.247 kb on + strandat 2937.404 kb on + strand, within MPMX20_02782at 2937.409 kb on + strand, within MPMX20_02782at 2937.411 kb on + strand, within MPMX20_02782at 2937.417 kb on - strand, within MPMX20_02782at 2937.419 kb on - strand, within MPMX20_02782at 2937.480 kb on + strand, within MPMX20_02782at 2937.498 kb on - strand, within MPMX20_02782at 2937.537 kb on - strand, within MPMX20_02782at 2937.542 kb on + strand, within MPMX20_02782at 2937.579 kb on + strand, within MPMX20_02782at 2937.587 kb on + strand, within MPMX20_02782at 2937.596 kb on - strand, within MPMX20_02782at 2937.619 kb on + strand, within MPMX20_02782at 2937.623 kb on + strand, within MPMX20_02782at 2937.673 kb on - strand, within MPMX20_02782at 2937.674 kb on - strand, within MPMX20_02782at 2937.801 kb on + strandat 2937.841 kb on - strandat 2937.931 kb on + strandat 2937.969 kb on + strand, within MPMX20_02783at 2937.969 kb on + strand, within MPMX20_02783at 2937.972 kb on - strand, within MPMX20_02783at 2937.977 kb on - strand, within MPMX20_02783at 2937.977 kb on - strand, within MPMX20_02783at 2938.045 kb on - strand, within MPMX20_02783at 2938.085 kb on + strand, within MPMX20_02783at 2938.106 kb on - strand, within MPMX20_02783at 2938.215 kb on + strand, within MPMX20_02783at 2938.215 kb on + strand, within MPMX20_02783at 2938.215 kb on + strand, within MPMX20_02783at 2938.215 kb on + strand, within MPMX20_02783at 2938.355 kb on + strand, within MPMX20_02783at 2938.355 kb on + strand, within MPMX20_02783at 2938.363 kb on - strand, within MPMX20_02783at 2938.363 kb on - strand, within MPMX20_02783at 2938.363 kb on - strand, within MPMX20_02783at 2938.395 kb on + strand, within MPMX20_02783at 2938.395 kb on + strand, within MPMX20_02783at 2938.395 kb on + strand, within MPMX20_02783at 2938.403 kb on - strand, within MPMX20_02783at 2938.510 kb on + strand, within MPMX20_02783at 2938.563 kb on - strand, within MPMX20_02783at 2938.573 kb on + strand, within MPMX20_02783at 2938.638 kb on + strand, within MPMX20_02783at 2938.646 kb on - strand, within MPMX20_02783at 2938.646 kb on - strand, within MPMX20_02783at 2938.679 kb on + strand, within MPMX20_02783at 2938.725 kb on - strand, within MPMX20_02783

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,936,378 + MPMX20_02781 0.54 +3.8
2,936,380 + MPMX20_02781 0.55 -1.0
2,936,391 - MPMX20_02781 0.55 +0.6
2,936,464 - MPMX20_02781 0.60 -0.6
2,936,500 + MPMX20_02781 0.62 -3.0
2,936,531 + MPMX20_02781 0.64 +4.8
2,936,531 + MPMX20_02781 0.64 -2.0
2,936,537 - MPMX20_02781 0.65 -2.5
2,936,539 - MPMX20_02781 0.65 -0.7
2,936,544 - MPMX20_02781 0.65 +0.6
2,936,544 - MPMX20_02781 0.65 +0.8
2,936,549 - MPMX20_02781 0.65 +0.3
2,936,616 + MPMX20_02781 0.70 -2.4
2,936,664 - MPMX20_02781 0.73 -0.5
2,936,705 + MPMX20_02781 0.75 -0.1
2,936,757 + MPMX20_02781 0.78 -0.1
2,936,786 + MPMX20_02781 0.80 +6.2
2,936,973 - -2.7
2,936,975 + +0.8
2,937,102 + +0.4
2,937,110 - +0.0
2,937,110 - +1.5
2,937,115 - -0.8
2,937,115 - +0.5
2,937,131 + -0.6
2,937,136 + +2.1
2,937,179 - +0.0
2,937,187 - -2.1
2,937,247 + -1.4
2,937,404 + MPMX20_02782 0.10 -0.1
2,937,409 + MPMX20_02782 0.12 -1.8
2,937,411 + MPMX20_02782 0.12 +4.6
2,937,417 - MPMX20_02782 0.14 -0.4
2,937,419 - MPMX20_02782 0.14 -1.4
2,937,480 + MPMX20_02782 0.30 -0.1
2,937,498 - MPMX20_02782 0.34 -3.0
2,937,537 - MPMX20_02782 0.44 +0.1
2,937,542 + MPMX20_02782 0.46 -0.4
2,937,579 + MPMX20_02782 0.55 +0.8
2,937,587 + MPMX20_02782 0.57 -0.8
2,937,596 - MPMX20_02782 0.59 -0.0
2,937,619 + MPMX20_02782 0.65 -2.3
2,937,623 + MPMX20_02782 0.66 -0.3
2,937,673 - MPMX20_02782 0.79 +2.6
2,937,674 - MPMX20_02782 0.79 +1.1
2,937,801 + +2.3
2,937,841 - -0.7
2,937,931 + +0.1
2,937,969 + MPMX20_02783 0.10 +0.6
2,937,969 + MPMX20_02783 0.10 +0.6
2,937,972 - MPMX20_02783 0.10 +0.2
2,937,977 - MPMX20_02783 0.11 +1.3
2,937,977 - MPMX20_02783 0.11 -1.7
2,938,045 - MPMX20_02783 0.14 +1.0
2,938,085 + MPMX20_02783 0.16 +1.2
2,938,106 - MPMX20_02783 0.17 +0.8
2,938,215 + MPMX20_02783 0.22 +1.3
2,938,215 + MPMX20_02783 0.22 -0.6
2,938,215 + MPMX20_02783 0.22 -0.5
2,938,215 + MPMX20_02783 0.22 +0.9
2,938,355 + MPMX20_02783 0.29 +1.0
2,938,355 + MPMX20_02783 0.29 +1.4
2,938,363 - MPMX20_02783 0.29 +1.0
2,938,363 - MPMX20_02783 0.29 +0.9
2,938,363 - MPMX20_02783 0.29 +1.7
2,938,395 + MPMX20_02783 0.31 +0.8
2,938,395 + MPMX20_02783 0.31 +1.3
2,938,395 + MPMX20_02783 0.31 +0.3
2,938,403 - MPMX20_02783 0.31 +0.1
2,938,510 + MPMX20_02783 0.36 +0.1
2,938,563 - MPMX20_02783 0.39 +0.7
2,938,573 + MPMX20_02783 0.39 +5.0
2,938,638 + MPMX20_02783 0.42 +1.3
2,938,646 - MPMX20_02783 0.43 -1.8
2,938,646 - MPMX20_02783 0.43 -1.0
2,938,679 + MPMX20_02783 0.44 +0.2
2,938,725 - MPMX20_02783 0.47 +2.4

Or see this region's nucleotide sequence