Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02412

Experiment: M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02410 and MPMX20_02411 are separated by 65 nucleotidesMPMX20_02411 and MPMX20_02412 are separated by 171 nucleotidesMPMX20_02412 and MPMX20_02413 overlap by 4 nucleotidesMPMX20_02413 and MPMX20_02414 are separated by 14 nucleotidesMPMX20_02414 and MPMX20_02415 are separated by 51 nucleotides MPMX20_02410: MPMX20_02410 - NADPH-dependent curcumin reductase, at 2,544,655 to 2,545,695 _02410 MPMX20_02411: MPMX20_02411 - hypothetical protein, at 2,545,761 to 2,546,315 _02411 MPMX20_02412: MPMX20_02412 - L-amino acid N-acyltransferase MnaT, at 2,546,487 to 2,547,005 _02412 MPMX20_02413: MPMX20_02413 - Inner membrane protein YdcZ, at 2,547,002 to 2,547,451 _02413 MPMX20_02414: MPMX20_02414 - putative protein YdcY, at 2,547,466 to 2,547,699 _02414 MPMX20_02415: MPMX20_02415 - Periplasmic dipeptide transport protein, at 2,547,751 to 2,549,349 _02415 Position (kb) 2546 2547 2548Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2545.520 kb on - strand, within MPMX20_02410at 2545.590 kb on - strand, within MPMX20_02410at 2545.664 kb on - strandat 2545.744 kb on + strandat 2545.744 kb on + strandat 2545.801 kb on - strandat 2545.804 kb on - strandat 2545.844 kb on + strand, within MPMX20_02411at 2545.850 kb on + strand, within MPMX20_02411at 2545.893 kb on - strand, within MPMX20_02411at 2546.043 kb on + strand, within MPMX20_02411at 2546.045 kb on + strand, within MPMX20_02411at 2546.104 kb on - strand, within MPMX20_02411at 2546.129 kb on + strand, within MPMX20_02411at 2546.214 kb on - strand, within MPMX20_02411at 2546.230 kb on + strand, within MPMX20_02411at 2546.486 kb on - strandat 2546.504 kb on + strandat 2546.534 kb on + strandat 2546.543 kb on - strand, within MPMX20_02412at 2546.550 kb on + strand, within MPMX20_02412at 2546.555 kb on + strand, within MPMX20_02412at 2546.558 kb on - strand, within MPMX20_02412at 2546.611 kb on + strand, within MPMX20_02412at 2546.611 kb on + strand, within MPMX20_02412at 2546.611 kb on + strand, within MPMX20_02412at 2546.638 kb on + strand, within MPMX20_02412at 2546.638 kb on + strand, within MPMX20_02412at 2546.643 kb on + strand, within MPMX20_02412at 2546.645 kb on + strand, within MPMX20_02412at 2546.646 kb on - strand, within MPMX20_02412at 2546.651 kb on - strand, within MPMX20_02412at 2546.704 kb on + strand, within MPMX20_02412at 2546.728 kb on - strand, within MPMX20_02412at 2546.733 kb on - strand, within MPMX20_02412at 2546.762 kb on + strand, within MPMX20_02412at 2546.762 kb on + strand, within MPMX20_02412at 2546.769 kb on + strand, within MPMX20_02412at 2546.777 kb on - strand, within MPMX20_02412at 2546.806 kb on - strand, within MPMX20_02412at 2546.866 kb on + strand, within MPMX20_02412at 2546.866 kb on + strand, within MPMX20_02412at 2546.874 kb on - strand, within MPMX20_02412at 2546.899 kb on + strand, within MPMX20_02412at 2546.946 kb on + strand, within MPMX20_02412at 2546.954 kb on - strandat 2547.074 kb on - strand, within MPMX20_02413at 2547.081 kb on + strand, within MPMX20_02413at 2547.083 kb on + strand, within MPMX20_02413at 2547.083 kb on + strand, within MPMX20_02413at 2547.091 kb on - strand, within MPMX20_02413at 2547.091 kb on - strand, within MPMX20_02413at 2547.130 kb on + strand, within MPMX20_02413at 2547.392 kb on + strand, within MPMX20_02413at 2547.402 kb on + strand, within MPMX20_02413at 2547.409 kb on - strandat 2547.428 kb on - strandat 2547.490 kb on - strand, within MPMX20_02414at 2547.561 kb on - strand, within MPMX20_02414at 2547.564 kb on + strand, within MPMX20_02414at 2547.589 kb on + strand, within MPMX20_02414at 2547.589 kb on + strand, within MPMX20_02414at 2547.589 kb on + strand, within MPMX20_02414at 2547.589 kb on + strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.597 kb on - strand, within MPMX20_02414at 2547.620 kb on - strand, within MPMX20_02414at 2547.673 kb on + strand, within MPMX20_02414at 2547.681 kb on - strandat 2547.681 kb on - strandat 2547.705 kb on + strandat 2547.705 kb on + strandat 2547.789 kb on + strandat 2547.797 kb on - strandat 2547.797 kb on - strandat 2547.797 kb on - strandat 2547.797 kb on - strandat 2547.799 kb on + strandat 2547.804 kb on - strandat 2547.832 kb on - strandat 2547.892 kb on + strandat 2547.912 kb on + strand, within MPMX20_02415

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,545,520 - MPMX20_02410 0.83 -1.1
2,545,590 - MPMX20_02410 0.90 +1.1
2,545,664 - +0.1
2,545,744 + -0.5
2,545,744 + -0.5
2,545,801 - -1.7
2,545,804 - +0.0
2,545,844 + MPMX20_02411 0.15 -1.5
2,545,850 + MPMX20_02411 0.16 -0.7
2,545,893 - MPMX20_02411 0.24 -0.4
2,546,043 + MPMX20_02411 0.51 -0.6
2,546,045 + MPMX20_02411 0.51 -1.8
2,546,104 - MPMX20_02411 0.62 -0.1
2,546,129 + MPMX20_02411 0.66 -0.5
2,546,214 - MPMX20_02411 0.82 -0.1
2,546,230 + MPMX20_02411 0.85 -1.6
2,546,486 - -0.7
2,546,504 + -1.3
2,546,534 + -1.2
2,546,543 - MPMX20_02412 0.11 -1.5
2,546,550 + MPMX20_02412 0.12 -1.1
2,546,555 + MPMX20_02412 0.13 -1.5
2,546,558 - MPMX20_02412 0.14 -0.3
2,546,611 + MPMX20_02412 0.24 -1.4
2,546,611 + MPMX20_02412 0.24 -1.7
2,546,611 + MPMX20_02412 0.24 -1.8
2,546,638 + MPMX20_02412 0.29 -3.3
2,546,638 + MPMX20_02412 0.29 -1.4
2,546,643 + MPMX20_02412 0.30 -1.5
2,546,645 + MPMX20_02412 0.30 -0.8
2,546,646 - MPMX20_02412 0.31 +0.9
2,546,651 - MPMX20_02412 0.32 -1.8
2,546,704 + MPMX20_02412 0.42 -0.6
2,546,728 - MPMX20_02412 0.46 -1.7
2,546,733 - MPMX20_02412 0.47 -1.3
2,546,762 + MPMX20_02412 0.53 -1.0
2,546,762 + MPMX20_02412 0.53 -0.6
2,546,769 + MPMX20_02412 0.54 -1.1
2,546,777 - MPMX20_02412 0.56 -3.3
2,546,806 - MPMX20_02412 0.61 -0.5
2,546,866 + MPMX20_02412 0.73 -0.1
2,546,866 + MPMX20_02412 0.73 -1.6
2,546,874 - MPMX20_02412 0.75 +0.2
2,546,899 + MPMX20_02412 0.79 -1.6
2,546,946 + MPMX20_02412 0.88 -0.5
2,546,954 - -2.8
2,547,074 - MPMX20_02413 0.16 -1.8
2,547,081 + MPMX20_02413 0.18 +1.5
2,547,083 + MPMX20_02413 0.18 +0.8
2,547,083 + MPMX20_02413 0.18 -2.8
2,547,091 - MPMX20_02413 0.20 +1.2
2,547,091 - MPMX20_02413 0.20 -1.0
2,547,130 + MPMX20_02413 0.28 +0.0
2,547,392 + MPMX20_02413 0.87 -2.1
2,547,402 + MPMX20_02413 0.89 +0.1
2,547,409 - -0.5
2,547,428 - -1.8
2,547,490 - MPMX20_02414 0.10 -2.0
2,547,561 - MPMX20_02414 0.41 +0.0
2,547,564 + MPMX20_02414 0.42 -1.6
2,547,589 + MPMX20_02414 0.53 -1.0
2,547,589 + MPMX20_02414 0.53 -0.4
2,547,589 + MPMX20_02414 0.53 +0.5
2,547,589 + MPMX20_02414 0.53 -2.4
2,547,597 - MPMX20_02414 0.56 -1.8
2,547,597 - MPMX20_02414 0.56 -0.7
2,547,597 - MPMX20_02414 0.56 +0.2
2,547,597 - MPMX20_02414 0.56 +0.9
2,547,597 - MPMX20_02414 0.56 -2.2
2,547,597 - MPMX20_02414 0.56 -0.2
2,547,597 - MPMX20_02414 0.56 +0.0
2,547,597 - MPMX20_02414 0.56 +0.5
2,547,597 - MPMX20_02414 0.56 -0.7
2,547,597 - MPMX20_02414 0.56 -0.5
2,547,620 - MPMX20_02414 0.66 -1.8
2,547,673 + MPMX20_02414 0.88 +0.2
2,547,681 - +1.1
2,547,681 - -0.1
2,547,705 + +1.6
2,547,705 + -1.3
2,547,789 + -0.5
2,547,797 - -0.5
2,547,797 - +1.7
2,547,797 - -2.3
2,547,797 - -0.5
2,547,799 + +2.0
2,547,804 - +1.2
2,547,832 - -1.0
2,547,892 + -0.2
2,547,912 + MPMX20_02415 0.10 -0.5

Or see this region's nucleotide sequence