Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02372

Experiment: M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02371 and MPMX20_02372 are separated by 43 nucleotidesMPMX20_02372 and MPMX20_02373 are separated by 199 nucleotides MPMX20_02371: MPMX20_02371 - Alcohol dehydrogenase, propanol-preferring, at 2,499,392 to 2,500,402 _02371 MPMX20_02372: MPMX20_02372 - HTH-type transcriptional repressor NsrR, at 2,500,446 to 2,500,952 _02372 MPMX20_02373: MPMX20_02373 - NADH dehydrogenase-like protein, at 2,501,152 to 2,502,354 _02373 Position (kb) 2500 2501Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 2499.468 kb on - strandat 2499.549 kb on + strand, within MPMX20_02371at 2499.607 kb on - strand, within MPMX20_02371at 2499.608 kb on - strand, within MPMX20_02371at 2499.654 kb on + strand, within MPMX20_02371at 2499.662 kb on - strand, within MPMX20_02371at 2499.681 kb on - strand, within MPMX20_02371at 2499.695 kb on - strand, within MPMX20_02371at 2499.705 kb on - strand, within MPMX20_02371at 2499.743 kb on + strand, within MPMX20_02371at 2499.743 kb on + strand, within MPMX20_02371at 2499.743 kb on + strand, within MPMX20_02371at 2499.749 kb on - strand, within MPMX20_02371at 2499.751 kb on - strand, within MPMX20_02371at 2499.751 kb on - strand, within MPMX20_02371at 2499.799 kb on - strand, within MPMX20_02371at 2499.833 kb on + strand, within MPMX20_02371at 2499.833 kb on - strand, within MPMX20_02371at 2499.857 kb on - strand, within MPMX20_02371at 2499.872 kb on - strand, within MPMX20_02371at 2499.873 kb on - strand, within MPMX20_02371at 2499.910 kb on + strand, within MPMX20_02371at 2499.910 kb on + strand, within MPMX20_02371at 2499.910 kb on + strand, within MPMX20_02371at 2499.918 kb on - strand, within MPMX20_02371at 2499.923 kb on - strand, within MPMX20_02371at 2500.060 kb on + strand, within MPMX20_02371at 2500.098 kb on - strand, within MPMX20_02371at 2500.120 kb on - strand, within MPMX20_02371at 2500.216 kb on - strand, within MPMX20_02371at 2500.216 kb on - strand, within MPMX20_02371at 2500.250 kb on + strand, within MPMX20_02371at 2500.251 kb on + strand, within MPMX20_02371at 2500.349 kb on - strandat 2500.369 kb on - strandat 2500.382 kb on - strandat 2500.382 kb on - strandat 2500.579 kb on - strand, within MPMX20_02372at 2500.581 kb on + strand, within MPMX20_02372at 2500.589 kb on - strand, within MPMX20_02372at 2500.612 kb on + strand, within MPMX20_02372at 2500.746 kb on - strand, within MPMX20_02372at 2500.785 kb on - strand, within MPMX20_02372at 2500.897 kb on + strand, within MPMX20_02372at 2500.908 kb on - strandat 2501.120 kb on + strandat 2501.120 kb on + strandat 2501.451 kb on + strand, within MPMX20_02373at 2501.462 kb on + strand, within MPMX20_02373at 2501.470 kb on - strand, within MPMX20_02373at 2501.470 kb on - strand, within MPMX20_02373at 2501.549 kb on - strand, within MPMX20_02373at 2501.566 kb on - strand, within MPMX20_02373at 2501.566 kb on - strand, within MPMX20_02373at 2501.600 kb on - strand, within MPMX20_02373at 2501.605 kb on + strand, within MPMX20_02373at 2501.615 kb on - strand, within MPMX20_02373at 2501.615 kb on - strand, within MPMX20_02373at 2501.754 kb on + strand, within MPMX20_02373at 2501.761 kb on + strand, within MPMX20_02373at 2501.766 kb on + strand, within MPMX20_02373at 2501.774 kb on - strand, within MPMX20_02373at 2501.774 kb on - strand, within MPMX20_02373at 2501.774 kb on - strand, within MPMX20_02373at 2501.774 kb on - strand, within MPMX20_02373at 2501.812 kb on + strand, within MPMX20_02373at 2501.812 kb on + strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.820 kb on - strand, within MPMX20_02373at 2501.857 kb on - strand, within MPMX20_02373at 2501.857 kb on - strand, within MPMX20_02373at 2501.857 kb on - strand, within MPMX20_02373at 2501.895 kb on - strand, within MPMX20_02373at 2501.906 kb on + strand, within MPMX20_02373

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,499,468 - -1.4
2,499,549 + MPMX20_02371 0.16 -0.5
2,499,607 - MPMX20_02371 0.21 +2.5
2,499,608 - MPMX20_02371 0.21 -0.2
2,499,654 + MPMX20_02371 0.26 -2.1
2,499,662 - MPMX20_02371 0.27 -0.5
2,499,681 - MPMX20_02371 0.29 -2.0
2,499,695 - MPMX20_02371 0.30 +1.2
2,499,705 - MPMX20_02371 0.31 +4.8
2,499,743 + MPMX20_02371 0.35 -0.1
2,499,743 + MPMX20_02371 0.35 -0.1
2,499,743 + MPMX20_02371 0.35 +0.0
2,499,749 - MPMX20_02371 0.35 -0.1
2,499,751 - MPMX20_02371 0.36 -1.5
2,499,751 - MPMX20_02371 0.36 -1.7
2,499,799 - MPMX20_02371 0.40 +1.1
2,499,833 + MPMX20_02371 0.44 +1.9
2,499,833 - MPMX20_02371 0.44 -1.5
2,499,857 - MPMX20_02371 0.46 +0.5
2,499,872 - MPMX20_02371 0.47 +4.3
2,499,873 - MPMX20_02371 0.48 +0.8
2,499,910 + MPMX20_02371 0.51 -0.8
2,499,910 + MPMX20_02371 0.51 -0.7
2,499,910 + MPMX20_02371 0.51 -0.8
2,499,918 - MPMX20_02371 0.52 -1.4
2,499,923 - MPMX20_02371 0.53 +1.2
2,500,060 + MPMX20_02371 0.66 +3.8
2,500,098 - MPMX20_02371 0.70 -0.3
2,500,120 - MPMX20_02371 0.72 -0.1
2,500,216 - MPMX20_02371 0.82 -0.7
2,500,216 - MPMX20_02371 0.82 -1.0
2,500,250 + MPMX20_02371 0.85 -0.5
2,500,251 + MPMX20_02371 0.85 +0.7
2,500,349 - -1.9
2,500,369 - -0.1
2,500,382 - -2.8
2,500,382 - +0.8
2,500,579 - MPMX20_02372 0.26 -1.0
2,500,581 + MPMX20_02372 0.27 +0.3
2,500,589 - MPMX20_02372 0.28 +1.9
2,500,612 + MPMX20_02372 0.33 -0.5
2,500,746 - MPMX20_02372 0.59 -1.7
2,500,785 - MPMX20_02372 0.67 -1.1
2,500,897 + MPMX20_02372 0.89 -1.3
2,500,908 - -3.7
2,501,120 + -1.5
2,501,120 + -1.1
2,501,451 + MPMX20_02373 0.25 +0.1
2,501,462 + MPMX20_02373 0.26 -2.2
2,501,470 - MPMX20_02373 0.26 -1.5
2,501,470 - MPMX20_02373 0.26 -2.0
2,501,549 - MPMX20_02373 0.33 +2.6
2,501,566 - MPMX20_02373 0.34 +0.2
2,501,566 - MPMX20_02373 0.34 -1.9
2,501,600 - MPMX20_02373 0.37 +0.2
2,501,605 + MPMX20_02373 0.38 -1.0
2,501,615 - MPMX20_02373 0.38 -1.8
2,501,615 - MPMX20_02373 0.38 +1.9
2,501,754 + MPMX20_02373 0.50 -2.7
2,501,761 + MPMX20_02373 0.51 -0.7
2,501,766 + MPMX20_02373 0.51 +0.7
2,501,774 - MPMX20_02373 0.52 +1.7
2,501,774 - MPMX20_02373 0.52 +0.6
2,501,774 - MPMX20_02373 0.52 -0.5
2,501,774 - MPMX20_02373 0.52 +2.1
2,501,812 + MPMX20_02373 0.55 -0.4
2,501,812 + MPMX20_02373 0.55 -0.1
2,501,820 - MPMX20_02373 0.56 +1.2
2,501,820 - MPMX20_02373 0.56 -0.0
2,501,820 - MPMX20_02373 0.56 -1.4
2,501,820 - MPMX20_02373 0.56 +0.0
2,501,820 - MPMX20_02373 0.56 -0.0
2,501,857 - MPMX20_02373 0.59 +0.2
2,501,857 - MPMX20_02373 0.59 -1.7
2,501,857 - MPMX20_02373 0.59 +1.5
2,501,895 - MPMX20_02373 0.62 -0.8
2,501,906 + MPMX20_02373 0.63 +0.0

Or see this region's nucleotide sequence