Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00816

Experiment: M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00814 and MPMX20_00815 are separated by 0 nucleotidesMPMX20_00815 and MPMX20_00816 are separated by 116 nucleotidesMPMX20_00816 and MPMX20_00817 are separated by 67 nucleotides MPMX20_00814: MPMX20_00814 - S-adenosylmethionine decarboxylase proenzyme, at 856,523 to 857,317 _00814 MPMX20_00815: MPMX20_00815 - Polyamine aminopropyltransferase, at 857,318 to 858,187 _00815 MPMX20_00816: MPMX20_00816 - hypothetical protein, at 858,304 to 858,690 _00816 MPMX20_00817: MPMX20_00817 - Blue copper oxidase CueO, at 858,758 to 860,356 _00817 Position (kb) 858 859Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 857.310 kb on - strandat 857.329 kb on + strandat 857.366 kb on + strandat 857.374 kb on - strandat 857.374 kb on - strandat 857.378 kb on + strandat 857.417 kb on + strand, within MPMX20_00815at 857.440 kb on - strand, within MPMX20_00815at 857.468 kb on + strand, within MPMX20_00815at 857.500 kb on - strand, within MPMX20_00815at 857.500 kb on - strand, within MPMX20_00815at 857.591 kb on - strand, within MPMX20_00815at 857.638 kb on + strand, within MPMX20_00815at 857.646 kb on - strand, within MPMX20_00815at 857.646 kb on - strand, within MPMX20_00815at 857.646 kb on - strand, within MPMX20_00815at 857.704 kb on + strand, within MPMX20_00815at 857.735 kb on + strand, within MPMX20_00815at 857.735 kb on + strand, within MPMX20_00815at 857.735 kb on + strand, within MPMX20_00815at 857.743 kb on - strand, within MPMX20_00815at 857.743 kb on - strand, within MPMX20_00815at 857.765 kb on - strand, within MPMX20_00815at 857.811 kb on + strand, within MPMX20_00815at 857.811 kb on + strand, within MPMX20_00815at 857.819 kb on - strand, within MPMX20_00815at 857.828 kb on + strand, within MPMX20_00815at 857.828 kb on + strand, within MPMX20_00815at 857.914 kb on + strand, within MPMX20_00815at 857.922 kb on - strand, within MPMX20_00815at 857.922 kb on - strand, within MPMX20_00815at 857.948 kb on + strand, within MPMX20_00815at 857.974 kb on + strand, within MPMX20_00815at 858.119 kb on - strandat 858.142 kb on - strandat 858.142 kb on - strandat 858.142 kb on - strandat 858.197 kb on + strandat 858.259 kb on - strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.282 kb on + strandat 858.284 kb on + strandat 858.284 kb on + strandat 858.284 kb on + strandat 858.340 kb on + strandat 858.543 kb on - strand, within MPMX20_00816at 858.545 kb on + strand, within MPMX20_00816at 858.564 kb on - strand, within MPMX20_00816at 858.565 kb on - strand, within MPMX20_00816at 858.585 kb on + strand, within MPMX20_00816at 858.585 kb on + strand, within MPMX20_00816at 858.585 kb on + strand, within MPMX20_00816at 858.593 kb on - strand, within MPMX20_00816at 858.595 kb on - strand, within MPMX20_00816at 858.661 kb on - strandat 858.700 kb on - strandat 858.700 kb on - strandat 858.857 kb on + strandat 858.865 kb on - strandat 858.918 kb on + strand, within MPMX20_00817at 858.927 kb on + strand, within MPMX20_00817at 858.928 kb on - strand, within MPMX20_00817at 859.020 kb on + strand, within MPMX20_00817at 859.028 kb on - strand, within MPMX20_00817at 859.033 kb on - strand, within MPMX20_00817at 859.045 kb on - strand, within MPMX20_00817at 859.077 kb on + strand, within MPMX20_00817at 859.101 kb on + strand, within MPMX20_00817at 859.101 kb on + strand, within MPMX20_00817at 859.106 kb on + strand, within MPMX20_00817at 859.115 kb on + strand, within MPMX20_00817at 859.115 kb on - strand, within MPMX20_00817at 859.157 kb on - strand, within MPMX20_00817at 859.187 kb on - strand, within MPMX20_00817at 859.193 kb on - strand, within MPMX20_00817at 859.218 kb on + strand, within MPMX20_00817at 859.229 kb on - strand, within MPMX20_00817at 859.319 kb on - strand, within MPMX20_00817at 859.401 kb on - strand, within MPMX20_00817at 859.436 kb on + strand, within MPMX20_00817at 859.436 kb on - strand, within MPMX20_00817at 859.483 kb on - strand, within MPMX20_00817at 859.491 kb on + strand, within MPMX20_00817at 859.499 kb on - strand, within MPMX20_00817at 859.499 kb on - strand, within MPMX20_00817at 859.504 kb on - strand, within MPMX20_00817at 859.509 kb on - strand, within MPMX20_00817at 859.611 kb on - strand, within MPMX20_00817at 859.635 kb on + strand, within MPMX20_00817at 859.643 kb on - strand, within MPMX20_00817at 859.670 kb on + strand, within MPMX20_00817at 859.681 kb on + strand, within MPMX20_00817

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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857,310 - -2.5
857,329 + +0.5
857,366 + -0.0
857,374 - -1.1
857,374 - +0.2
857,378 + +0.6
857,417 + MPMX20_00815 0.11 -0.0
857,440 - MPMX20_00815 0.14 -1.5
857,468 + MPMX20_00815 0.17 -2.5
857,500 - MPMX20_00815 0.21 -2.7
857,500 - MPMX20_00815 0.21 -0.6
857,591 - MPMX20_00815 0.31 -0.5
857,638 + MPMX20_00815 0.37 -1.3
857,646 - MPMX20_00815 0.38 -0.5
857,646 - MPMX20_00815 0.38 -0.8
857,646 - MPMX20_00815 0.38 -0.6
857,704 + MPMX20_00815 0.44 +1.1
857,735 + MPMX20_00815 0.48 +1.1
857,735 + MPMX20_00815 0.48 +1.1
857,735 + MPMX20_00815 0.48 -1.0
857,743 - MPMX20_00815 0.49 -0.5
857,743 - MPMX20_00815 0.49 -1.5
857,765 - MPMX20_00815 0.51 -0.0
857,811 + MPMX20_00815 0.57 +1.5
857,811 + MPMX20_00815 0.57 -1.2
857,819 - MPMX20_00815 0.58 +1.9
857,828 + MPMX20_00815 0.59 -0.8
857,828 + MPMX20_00815 0.59 -0.5
857,914 + MPMX20_00815 0.69 +0.7
857,922 - MPMX20_00815 0.69 +1.5
857,922 - MPMX20_00815 0.69 +0.5
857,948 + MPMX20_00815 0.72 +0.7
857,974 + MPMX20_00815 0.75 -0.0
858,119 - -0.0
858,142 - -0.8
858,142 - +0.4
858,142 - -1.0
858,197 + -0.8
858,259 - +0.2
858,272 + -1.4
858,272 + +0.6
858,272 + +1.6
858,272 + -0.8
858,272 + +2.4
858,272 + -1.3
858,272 + +0.2
858,272 + -0.8
858,272 + -0.8
858,280 - -0.3
858,280 - -0.8
858,280 - -2.8
858,280 - +0.0
858,280 - +1.7
858,280 - -0.1
858,280 - -0.2
858,282 + -1.5
858,284 + -2.6
858,284 + +0.1
858,284 + -2.8
858,340 + -0.3
858,543 - MPMX20_00816 0.62 -1.9
858,545 + MPMX20_00816 0.62 -1.2
858,564 - MPMX20_00816 0.67 -1.6
858,565 - MPMX20_00816 0.67 -0.7
858,585 + MPMX20_00816 0.73 +1.7
858,585 + MPMX20_00816 0.73 -1.2
858,585 + MPMX20_00816 0.73 -1.3
858,593 - MPMX20_00816 0.75 +0.4
858,595 - MPMX20_00816 0.75 -0.9
858,661 - +2.2
858,700 - -2.3
858,700 - -0.7
858,857 + -1.2
858,865 - +1.1
858,918 + MPMX20_00817 0.10 -0.8
858,927 + MPMX20_00817 0.11 +1.7
858,928 - MPMX20_00817 0.11 -0.4
859,020 + MPMX20_00817 0.16 -1.8
859,028 - MPMX20_00817 0.17 +0.4
859,033 - MPMX20_00817 0.17 -1.3
859,045 - MPMX20_00817 0.18 +0.1
859,077 + MPMX20_00817 0.20 -1.1
859,101 + MPMX20_00817 0.21 +1.1
859,101 + MPMX20_00817 0.21 -1.5
859,106 + MPMX20_00817 0.22 -1.3
859,115 + MPMX20_00817 0.22 -1.4
859,115 - MPMX20_00817 0.22 +0.5
859,157 - MPMX20_00817 0.25 -0.4
859,187 - MPMX20_00817 0.27 -1.6
859,193 - MPMX20_00817 0.27 -0.0
859,218 + MPMX20_00817 0.29 -1.3
859,229 - MPMX20_00817 0.29 -0.7
859,319 - MPMX20_00817 0.35 +0.1
859,401 - MPMX20_00817 0.40 +2.7
859,436 + MPMX20_00817 0.42 -0.8
859,436 - MPMX20_00817 0.42 +0.3
859,483 - MPMX20_00817 0.45 -0.2
859,491 + MPMX20_00817 0.46 -0.4
859,499 - MPMX20_00817 0.46 +0.3
859,499 - MPMX20_00817 0.46 +1.1
859,504 - MPMX20_00817 0.47 +8.6
859,509 - MPMX20_00817 0.47 +0.3
859,611 - MPMX20_00817 0.53 -1.7
859,635 + MPMX20_00817 0.55 +1.4
859,643 - MPMX20_00817 0.55 -0.1
859,670 + MPMX20_00817 0.57 -1.4
859,681 + MPMX20_00817 0.58 +1.8

Or see this region's nucleotide sequence