Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00526

Experiment: 1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00525 and MPMX20_00526 overlap by 4 nucleotidesMPMX20_00526 and MPMX20_00527 are separated by 85 nucleotides MPMX20_00525: MPMX20_00525 - D-glucosaminate-6-phosphate ammonia lyase, at 540,828 to 541,946 _00525 MPMX20_00526: MPMX20_00526 - 2-dehydro-3-deoxy-phosphogluconate aldolase, at 541,943 to 542,683 _00526 MPMX20_00527: MPMX20_00527 - 6-phosphogluconolactonase, at 542,769 to 543,902 _00527 Position (kb) 541 542 543Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 540.975 kb on - strand, within MPMX20_00525at 541.021 kb on + strand, within MPMX20_00525at 541.029 kb on - strand, within MPMX20_00525at 541.037 kb on - strand, within MPMX20_00525at 541.037 kb on - strand, within MPMX20_00525at 541.080 kb on + strand, within MPMX20_00525at 541.244 kb on - strand, within MPMX20_00525at 541.303 kb on + strand, within MPMX20_00525at 541.305 kb on + strand, within MPMX20_00525at 541.311 kb on - strand, within MPMX20_00525at 541.311 kb on - strand, within MPMX20_00525at 541.313 kb on - strand, within MPMX20_00525at 541.334 kb on - strand, within MPMX20_00525at 541.336 kb on + strand, within MPMX20_00525at 541.336 kb on + strand, within MPMX20_00525at 541.336 kb on + strand, within MPMX20_00525at 541.344 kb on - strand, within MPMX20_00525at 541.344 kb on - strand, within MPMX20_00525at 541.344 kb on - strand, within MPMX20_00525at 541.375 kb on - strand, within MPMX20_00525at 541.429 kb on - strand, within MPMX20_00525at 541.435 kb on - strand, within MPMX20_00525at 541.586 kb on + strand, within MPMX20_00525at 541.586 kb on + strand, within MPMX20_00525at 541.594 kb on - strand, within MPMX20_00525at 541.607 kb on + strand, within MPMX20_00525at 541.630 kb on + strand, within MPMX20_00525at 541.649 kb on + strand, within MPMX20_00525at 541.671 kb on + strand, within MPMX20_00525at 541.686 kb on - strand, within MPMX20_00525at 541.704 kb on + strand, within MPMX20_00525at 541.704 kb on + strand, within MPMX20_00525at 541.704 kb on + strand, within MPMX20_00525at 541.704 kb on + strand, within MPMX20_00525at 541.704 kb on + strand, within MPMX20_00525at 541.704 kb on + strand, within MPMX20_00525at 541.704 kb on + strand, within MPMX20_00525at 541.712 kb on - strand, within MPMX20_00525at 541.712 kb on - strand, within MPMX20_00525at 541.712 kb on - strand, within MPMX20_00525at 541.712 kb on - strand, within MPMX20_00525at 541.726 kb on + strand, within MPMX20_00525at 541.734 kb on - strand, within MPMX20_00525at 541.792 kb on - strand, within MPMX20_00525at 541.809 kb on - strand, within MPMX20_00525at 541.809 kb on - strand, within MPMX20_00525at 541.863 kb on + strandat 541.871 kb on - strandat 541.871 kb on - strandat 541.873 kb on + strandat 541.881 kb on - strandat 541.920 kb on + strandat 541.920 kb on + strandat 541.920 kb on + strandat 541.921 kb on + strandat 541.929 kb on - strandat 541.929 kb on - strandat 542.048 kb on - strand, within MPMX20_00526at 542.117 kb on - strand, within MPMX20_00526at 542.117 kb on - strand, within MPMX20_00526at 542.120 kb on - strand, within MPMX20_00526at 542.135 kb on - strand, within MPMX20_00526at 542.169 kb on + strand, within MPMX20_00526at 542.187 kb on - strand, within MPMX20_00526at 542.224 kb on + strand, within MPMX20_00526at 542.354 kb on - strand, within MPMX20_00526at 542.361 kb on + strand, within MPMX20_00526at 542.361 kb on + strand, within MPMX20_00526at 542.369 kb on - strand, within MPMX20_00526at 542.369 kb on - strand, within MPMX20_00526at 542.369 kb on - strand, within MPMX20_00526at 542.438 kb on + strand, within MPMX20_00526at 542.446 kb on - strand, within MPMX20_00526at 542.512 kb on - strand, within MPMX20_00526at 542.532 kb on + strand, within MPMX20_00526at 542.556 kb on + strand, within MPMX20_00526at 542.556 kb on + strand, within MPMX20_00526at 542.564 kb on - strand, within MPMX20_00526at 542.585 kb on + strand, within MPMX20_00526at 542.653 kb on + strandat 542.659 kb on - strandat 542.691 kb on + strandat 542.697 kb on + strandat 542.705 kb on - strandat 542.705 kb on - strandat 542.717 kb on - strandat 542.717 kb on - strandat 542.717 kb on - strandat 542.723 kb on + strandat 542.723 kb on + strandat 542.723 kb on + strandat 542.723 kb on + strandat 542.723 kb on + strandat 542.723 kb on + strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.731 kb on - strandat 542.776 kb on + strandat 542.776 kb on + strandat 542.784 kb on - strandat 542.835 kb on - strandat 542.839 kb on - strandat 542.863 kb on - strandat 542.877 kb on - strandat 542.877 kb on - strandat 542.882 kb on - strandat 542.884 kb on + strand, within MPMX20_00527at 542.930 kb on + strand, within MPMX20_00527at 542.930 kb on + strand, within MPMX20_00527at 542.938 kb on - strand, within MPMX20_00527at 542.938 kb on - strand, within MPMX20_00527at 542.942 kb on + strand, within MPMX20_00527at 542.950 kb on - strand, within MPMX20_00527at 542.950 kb on - strand, within MPMX20_00527at 542.957 kb on + strand, within MPMX20_00527at 543.001 kb on + strand, within MPMX20_00527at 543.001 kb on + strand, within MPMX20_00527at 543.009 kb on - strand, within MPMX20_00527at 543.027 kb on - strand, within MPMX20_00527at 543.029 kb on + strand, within MPMX20_00527at 543.043 kb on + strand, within MPMX20_00527at 543.043 kb on + strand, within MPMX20_00527at 543.053 kb on + strand, within MPMX20_00527at 543.066 kb on - strand, within MPMX20_00527at 543.082 kb on + strand, within MPMX20_00527at 543.090 kb on - strand, within MPMX20_00527at 543.097 kb on + strand, within MPMX20_00527at 543.117 kb on + strand, within MPMX20_00527at 543.118 kb on + strand, within MPMX20_00527at 543.125 kb on - strand, within MPMX20_00527at 543.125 kb on - strand, within MPMX20_00527at 543.195 kb on - strand, within MPMX20_00527at 543.218 kb on - strand, within MPMX20_00527at 543.307 kb on - strand, within MPMX20_00527at 543.353 kb on + strand, within MPMX20_00527at 543.366 kb on - strand, within MPMX20_00527at 543.394 kb on + strand, within MPMX20_00527at 543.521 kb on + strand, within MPMX20_00527at 543.534 kb on + strand, within MPMX20_00527at 543.542 kb on - strand, within MPMX20_00527at 543.576 kb on - strand, within MPMX20_00527at 543.583 kb on - strand, within MPMX20_00527

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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540,975 - MPMX20_00525 0.13 +0.9
541,021 + MPMX20_00525 0.17 +1.0
541,029 - MPMX20_00525 0.18 -0.2
541,037 - MPMX20_00525 0.19 +0.6
541,037 - MPMX20_00525 0.19 -1.3
541,080 + MPMX20_00525 0.23 +2.6
541,244 - MPMX20_00525 0.37 -0.8
541,303 + MPMX20_00525 0.42 -1.4
541,305 + MPMX20_00525 0.43 -0.9
541,311 - MPMX20_00525 0.43 +0.5
541,311 - MPMX20_00525 0.43 -0.4
541,313 - MPMX20_00525 0.43 -0.0
541,334 - MPMX20_00525 0.45 -0.8
541,336 + MPMX20_00525 0.45 +4.2
541,336 + MPMX20_00525 0.45 +0.6
541,336 + MPMX20_00525 0.45 +0.4
541,344 - MPMX20_00525 0.46 -1.6
541,344 - MPMX20_00525 0.46 -0.6
541,344 - MPMX20_00525 0.46 -0.3
541,375 - MPMX20_00525 0.49 +0.3
541,429 - MPMX20_00525 0.54 -0.3
541,435 - MPMX20_00525 0.54 -0.2
541,586 + MPMX20_00525 0.68 -0.6
541,586 + MPMX20_00525 0.68 -2.7
541,594 - MPMX20_00525 0.68 -1.7
541,607 + MPMX20_00525 0.70 +0.7
541,630 + MPMX20_00525 0.72 -0.2
541,649 + MPMX20_00525 0.73 +0.0
541,671 + MPMX20_00525 0.75 -0.8
541,686 - MPMX20_00525 0.77 -0.4
541,704 + MPMX20_00525 0.78 +0.0
541,704 + MPMX20_00525 0.78 -0.8
541,704 + MPMX20_00525 0.78 -0.0
541,704 + MPMX20_00525 0.78 -0.1
541,704 + MPMX20_00525 0.78 -1.1
541,704 + MPMX20_00525 0.78 -1.2
541,704 + MPMX20_00525 0.78 -0.3
541,712 - MPMX20_00525 0.79 +1.2
541,712 - MPMX20_00525 0.79 -0.8
541,712 - MPMX20_00525 0.79 +1.2
541,712 - MPMX20_00525 0.79 +0.4
541,726 + MPMX20_00525 0.80 -0.3
541,734 - MPMX20_00525 0.81 +0.1
541,792 - MPMX20_00525 0.86 -0.5
541,809 - MPMX20_00525 0.88 -0.5
541,809 - MPMX20_00525 0.88 -0.4
541,863 + -1.0
541,871 - -0.9
541,871 - -1.1
541,873 + -1.7
541,881 - +0.1
541,920 + -0.9
541,920 + -0.2
541,920 + +0.0
541,921 + -1.8
541,929 - -0.9
541,929 - -0.4
542,048 - MPMX20_00526 0.14 -0.3
542,117 - MPMX20_00526 0.23 +1.6
542,117 - MPMX20_00526 0.23 +2.6
542,120 - MPMX20_00526 0.24 +2.1
542,135 - MPMX20_00526 0.26 -0.3
542,169 + MPMX20_00526 0.30 +1.2
542,187 - MPMX20_00526 0.33 -0.6
542,224 + MPMX20_00526 0.38 +2.2
542,354 - MPMX20_00526 0.55 +0.1
542,361 + MPMX20_00526 0.56 +1.0
542,361 + MPMX20_00526 0.56 -0.8
542,369 - MPMX20_00526 0.57 -1.3
542,369 - MPMX20_00526 0.57 +1.2
542,369 - MPMX20_00526 0.57 +0.9
542,438 + MPMX20_00526 0.67 -0.3
542,446 - MPMX20_00526 0.68 -0.7
542,512 - MPMX20_00526 0.77 -1.0
542,532 + MPMX20_00526 0.79 -1.8
542,556 + MPMX20_00526 0.83 +1.2
542,556 + MPMX20_00526 0.83 +1.0
542,564 - MPMX20_00526 0.84 +2.2
542,585 + MPMX20_00526 0.87 +1.2
542,653 + -0.6
542,659 - -0.9
542,691 + -0.3
542,697 + -1.1
542,705 - +0.4
542,705 - -0.6
542,717 - +0.3
542,717 - -0.5
542,717 - +0.0
542,723 + -1.0
542,723 + +0.2
542,723 + -1.0
542,723 + -0.9
542,723 + -1.2
542,723 + +4.6
542,731 - -0.1
542,731 - +0.1
542,731 - +0.5
542,731 - +1.8
542,731 - -1.0
542,731 - -0.9
542,731 - -0.6
542,731 - -1.8
542,731 - +0.5
542,731 - +1.2
542,731 - -0.2
542,776 + -1.8
542,776 + -1.0
542,784 - +0.2
542,835 - -1.6
542,839 - +2.2
542,863 - +0.4
542,877 - +1.2
542,877 - +0.7
542,882 - -0.3
542,884 + MPMX20_00527 0.10 -0.2
542,930 + MPMX20_00527 0.14 -0.2
542,930 + MPMX20_00527 0.14 +2.8
542,938 - MPMX20_00527 0.15 -0.3
542,938 - MPMX20_00527 0.15 +1.4
542,942 + MPMX20_00527 0.15 -0.3
542,950 - MPMX20_00527 0.16 -2.0
542,950 - MPMX20_00527 0.16 +2.2
542,957 + MPMX20_00527 0.17 +3.2
543,001 + MPMX20_00527 0.20 -0.8
543,001 + MPMX20_00527 0.20 -0.3
543,009 - MPMX20_00527 0.21 +1.2
543,027 - MPMX20_00527 0.23 +0.4
543,029 + MPMX20_00527 0.23 +0.1
543,043 + MPMX20_00527 0.24 -0.9
543,043 + MPMX20_00527 0.24 +0.6
543,053 + MPMX20_00527 0.25 +1.2
543,066 - MPMX20_00527 0.26 -0.8
543,082 + MPMX20_00527 0.28 +2.1
543,090 - MPMX20_00527 0.28 -1.3
543,097 + MPMX20_00527 0.29 +0.2
543,117 + MPMX20_00527 0.31 +0.2
543,118 + MPMX20_00527 0.31 -0.6
543,125 - MPMX20_00527 0.31 +0.0
543,125 - MPMX20_00527 0.31 -1.1
543,195 - MPMX20_00527 0.38 -0.3
543,218 - MPMX20_00527 0.40 -1.3
543,307 - MPMX20_00527 0.47 -0.1
543,353 + MPMX20_00527 0.51 -0.3
543,366 - MPMX20_00527 0.53 -0.8
543,394 + MPMX20_00527 0.55 +1.0
543,521 + MPMX20_00527 0.66 -0.3
543,534 + MPMX20_00527 0.67 +2.2
543,542 - MPMX20_00527 0.68 +0.8
543,576 - MPMX20_00527 0.71 -0.1
543,583 - MPMX20_00527 0.72 +0.0

Or see this region's nucleotide sequence