Experiment: 1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00260 and MPMX20_00261 are separated by 119 nucleotides MPMX20_00261 and MPMX20_00262 are separated by 48 nucleotides MPMX20_00262 and MPMX20_00263 are separated by 115 nucleotides MPMX20_00263 and MPMX20_00264 are separated by 170 nucleotides
MPMX20_00260: MPMX20_00260 - DNA damage-inducible protein F, at 278,312 to 279,649
_00260
MPMX20_00261: MPMX20_00261 - hypothetical protein, at 279,769 to 279,978
_00261
MPMX20_00262: MPMX20_00262 - Zinc uptake regulation protein, at 280,027 to 280,539
_00262
MPMX20_00263: MPMX20_00263 - hypothetical protein, at 280,655 to 281,143
_00263
MPMX20_00264: MPMX20_00264 - hypothetical protein, at 281,314 to 282,624
_00264
Position (kb) 280
281 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8
9 at 279.030 kb on + strand, within MPMX20_00260 at 279.053 kb on - strand, within MPMX20_00260 at 279.144 kb on + strand, within MPMX20_00260 at 279.182 kb on + strand, within MPMX20_00260 at 279.202 kb on + strand, within MPMX20_00260 at 279.211 kb on - strand, within MPMX20_00260 at 279.212 kb on - strand, within MPMX20_00260 at 279.261 kb on + strand, within MPMX20_00260 at 279.269 kb on - strand, within MPMX20_00260 at 279.292 kb on + strand, within MPMX20_00260 at 279.292 kb on + strand, within MPMX20_00260 at 279.300 kb on - strand, within MPMX20_00260 at 279.339 kb on + strand, within MPMX20_00260 at 279.450 kb on + strand, within MPMX20_00260 at 279.450 kb on + strand, within MPMX20_00260 at 279.450 kb on + strand, within MPMX20_00260 at 279.450 kb on + strand, within MPMX20_00260 at 279.458 kb on - strand, within MPMX20_00260 at 279.458 kb on - strand, within MPMX20_00260 at 279.494 kb on + strand, within MPMX20_00260 at 279.494 kb on + strand, within MPMX20_00260 at 279.496 kb on - strand, within MPMX20_00260 at 279.505 kb on + strand, within MPMX20_00260 at 279.584 kb on + strand at 279.619 kb on - strand at 279.747 kb on + strand at 279.774 kb on - strand at 279.794 kb on + strand, within MPMX20_00261 at 279.804 kb on + strand, within MPMX20_00261 at 279.812 kb on - strand, within MPMX20_00261 at 279.812 kb on - strand, within MPMX20_00261 at 279.812 kb on - strand, within MPMX20_00261 at 279.812 kb on - strand, within MPMX20_00261 at 279.812 kb on - strand, within MPMX20_00261 at 279.818 kb on + strand, within MPMX20_00261 at 279.837 kb on + strand, within MPMX20_00261 at 279.837 kb on + strand, within MPMX20_00261 at 279.837 kb on + strand, within MPMX20_00261 at 279.904 kb on + strand, within MPMX20_00261 at 279.904 kb on + strand, within MPMX20_00261 at 279.904 kb on + strand, within MPMX20_00261 at 279.912 kb on - strand, within MPMX20_00261 at 280.040 kb on + strand at 280.050 kb on + strand at 280.098 kb on - strand, within MPMX20_00262 at 280.221 kb on - strand, within MPMX20_00262 at 280.284 kb on + strand, within MPMX20_00262 at 280.292 kb on - strand, within MPMX20_00262 at 280.292 kb on - strand, within MPMX20_00262 at 280.402 kb on - strand, within MPMX20_00262 at 280.404 kb on + strand, within MPMX20_00262 at 280.428 kb on + strand, within MPMX20_00262 at 280.436 kb on - strand, within MPMX20_00262 at 280.491 kb on - strand at 280.497 kb on + strand at 280.505 kb on - strand at 280.531 kb on - strand at 280.546 kb on + strand at 280.554 kb on + strand at 280.562 kb on - strand at 280.576 kb on + strand at 280.607 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.617 kb on + strand at 280.625 kb on - strand at 280.625 kb on - strand at 280.625 kb on - strand at 280.625 kb on - strand at 280.625 kb on - strand at 280.625 kb on - strand at 280.625 kb on - strand at 280.627 kb on - strand at 280.628 kb on + strand at 280.670 kb on - strand at 280.673 kb on + strand at 280.751 kb on + strand, within MPMX20_00263 at 280.780 kb on + strand, within MPMX20_00263 at 280.784 kb on + strand, within MPMX20_00263 at 280.792 kb on - strand, within MPMX20_00263 at 280.821 kb on + strand, within MPMX20_00263 at 280.821 kb on + strand, within MPMX20_00263 at 280.829 kb on - strand, within MPMX20_00263 at 280.855 kb on + strand, within MPMX20_00263 at 280.868 kb on + strand, within MPMX20_00263 at 280.868 kb on + strand, within MPMX20_00263 at 280.876 kb on - strand, within MPMX20_00263 at 280.878 kb on + strand, within MPMX20_00263 at 280.919 kb on - strand, within MPMX20_00263 at 280.929 kb on + strand, within MPMX20_00263 at 280.936 kb on - strand, within MPMX20_00263 at 280.959 kb on + strand, within MPMX20_00263 at 280.959 kb on + strand, within MPMX20_00263 at 280.959 kb on + strand, within MPMX20_00263 at 280.959 kb on + strand, within MPMX20_00263 at 280.959 kb on + strand, within MPMX20_00263 at 280.959 kb on + strand, within MPMX20_00263 at 280.966 kb on - strand, within MPMX20_00263 at 280.967 kb on - strand, within MPMX20_00263 at 280.967 kb on - strand, within MPMX20_00263 at 280.988 kb on + strand, within MPMX20_00263 at 281.004 kb on - strand, within MPMX20_00263 at 281.010 kb on - strand, within MPMX20_00263 at 281.055 kb on - strand, within MPMX20_00263 at 281.085 kb on + strand, within MPMX20_00263 at 281.089 kb on + strand, within MPMX20_00263 at 281.097 kb on - strand at 281.107 kb on - strand at 281.121 kb on + strand at 281.187 kb on + strand at 281.266 kb on + strand at 281.266 kb on - strand at 281.273 kb on + strand at 281.277 kb on + strand at 281.294 kb on + strand at 281.295 kb on + strand at 281.302 kb on + strand at 281.302 kb on + strand at 281.302 kb on + strand at 281.304 kb on - strand at 281.314 kb on - strand at 281.314 kb on - strand at 281.314 kb on - strand at 281.353 kb on + strand at 281.353 kb on - strand at 281.386 kb on + strand at 281.386 kb on + strand at 281.386 kb on + strand at 281.386 kb on + strand at 281.386 kb on + strand at 281.386 kb on + strand at 281.386 kb on + strand at 281.391 kb on + strand at 281.391 kb on + strand at 281.394 kb on - strand at 281.394 kb on - strand at 281.394 kb on - strand at 281.394 kb on - strand at 281.394 kb on - strand at 281.396 kb on + strand at 281.399 kb on - strand at 281.404 kb on - strand at 281.404 kb on - strand at 281.416 kb on + strand at 281.454 kb on - strand, within MPMX20_00264 at 281.461 kb on + strand, within MPMX20_00264 at 281.466 kb on + strand, within MPMX20_00264 at 281.474 kb on - strand, within MPMX20_00264 at 281.479 kb on - strand, within MPMX20_00264 at 281.499 kb on + strand, within MPMX20_00264 at 281.504 kb on + strand, within MPMX20_00264
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 279,030 + MPMX20_00260 0.54 -0.8 279,053 - MPMX20_00260 0.55 +0.8 279,144 + MPMX20_00260 0.62 -0.8 279,182 + MPMX20_00260 0.65 -1.7 279,202 + MPMX20_00260 0.67 -0.1 279,211 - MPMX20_00260 0.67 -0.2 279,212 - MPMX20_00260 0.67 -0.7 279,261 + MPMX20_00260 0.71 +0.7 279,269 - MPMX20_00260 0.72 +1.9 279,292 + MPMX20_00260 0.73 -0.8 279,292 + MPMX20_00260 0.73 -0.2 279,300 - MPMX20_00260 0.74 -1.5 279,339 + MPMX20_00260 0.77 +0.1 279,450 + MPMX20_00260 0.85 +2.2 279,450 + MPMX20_00260 0.85 -3.1 279,450 + MPMX20_00260 0.85 -1.1 279,450 + MPMX20_00260 0.85 +0.3 279,458 - MPMX20_00260 0.86 -1.1 279,458 - MPMX20_00260 0.86 +1.2 279,494 + MPMX20_00260 0.88 -1.9 279,494 + MPMX20_00260 0.88 -0.0 279,496 - MPMX20_00260 0.88 -0.1 279,505 + MPMX20_00260 0.89 +0.7 279,584 + +0.5 279,619 - +0.2 279,747 + +0.3 279,774 - +0.2 279,794 + MPMX20_00261 0.12 -2.6 279,804 + MPMX20_00261 0.17 -0.1 279,812 - MPMX20_00261 0.20 +0.6 279,812 - MPMX20_00261 0.20 +1.2 279,812 - MPMX20_00261 0.20 -0.5 279,812 - MPMX20_00261 0.20 -0.3 279,812 - MPMX20_00261 0.20 -0.6 279,818 + MPMX20_00261 0.23 -0.1 279,837 + MPMX20_00261 0.32 -0.3 279,837 + MPMX20_00261 0.32 -0.2 279,837 + MPMX20_00261 0.32 -0.8 279,904 + MPMX20_00261 0.64 -0.8 279,904 + MPMX20_00261 0.64 -0.4 279,904 + MPMX20_00261 0.64 +1.4 279,912 - MPMX20_00261 0.68 -0.4 280,040 + +0.4 280,050 + +0.4 280,098 - MPMX20_00262 0.14 +9.3 280,221 - MPMX20_00262 0.38 -0.2 280,284 + MPMX20_00262 0.50 -0.3 280,292 - MPMX20_00262 0.52 +0.2 280,292 - MPMX20_00262 0.52 -1.1 280,402 - MPMX20_00262 0.73 +0.4 280,404 + MPMX20_00262 0.73 +0.7 280,428 + MPMX20_00262 0.78 -0.8 280,436 - MPMX20_00262 0.80 -0.6 280,491 - +0.2 280,497 + +0.2 280,505 - -0.8 280,531 - -0.5 280,546 + +0.0 280,554 + +0.6 280,562 - -1.0 280,576 + -0.8 280,607 + -0.8 280,617 + +0.0 280,617 + -0.8 280,617 + +0.2 280,617 + +0.4 280,617 + -1.1 280,617 + -0.3 280,617 + +1.6 280,617 + -0.5 280,617 + +0.7 280,617 + +0.9 280,617 + +9.7 280,625 - +0.3 280,625 - +0.3 280,625 - -0.2 280,625 - -0.1 280,625 - +0.7 280,625 - +0.7 280,625 - -0.2 280,627 - -0.5 280,628 + -0.3 280,670 - +0.8 280,673 + +0.8 280,751 + MPMX20_00263 0.20 +0.5 280,780 + MPMX20_00263 0.26 +0.4 280,784 + MPMX20_00263 0.26 +2.2 280,792 - MPMX20_00263 0.28 -0.6 280,821 + MPMX20_00263 0.34 +0.7 280,821 + MPMX20_00263 0.34 -0.6 280,829 - MPMX20_00263 0.36 -0.8 280,855 + MPMX20_00263 0.41 +0.2 280,868 + MPMX20_00263 0.44 -0.7 280,868 + MPMX20_00263 0.44 +0.1 280,876 - MPMX20_00263 0.45 +0.7 280,878 + MPMX20_00263 0.46 +1.8 280,919 - MPMX20_00263 0.54 -0.8 280,929 + MPMX20_00263 0.56 -0.6 280,936 - MPMX20_00263 0.57 -1.2 280,959 + MPMX20_00263 0.62 -0.3 280,959 + MPMX20_00263 0.62 +0.9 280,959 + MPMX20_00263 0.62 -0.6 280,959 + MPMX20_00263 0.62 -1.0 280,959 + MPMX20_00263 0.62 -1.1 280,959 + MPMX20_00263 0.62 +1.0 280,966 - MPMX20_00263 0.64 -0.3 280,967 - MPMX20_00263 0.64 -1.1 280,967 - MPMX20_00263 0.64 +0.8 280,988 + MPMX20_00263 0.68 -0.0 281,004 - MPMX20_00263 0.71 -2.3 281,010 - MPMX20_00263 0.73 -0.3 281,055 - MPMX20_00263 0.82 -1.3 281,085 + MPMX20_00263 0.88 +0.4 281,089 + MPMX20_00263 0.89 +0.2 281,097 - +0.2 281,107 - -1.3 281,121 + +3.2 281,187 + -0.3 281,266 + -1.2 281,266 - -0.3 281,273 + -0.9 281,277 + -1.3 281,294 + -0.2 281,295 + -0.1 281,302 + -0.3 281,302 + -0.7 281,302 + +1.2 281,304 - +1.0 281,314 - +1.6 281,314 - +1.2 281,314 - -0.8 281,353 + +1.2 281,353 - +1.4 281,386 + +0.0 281,386 + -0.0 281,386 + -0.6 281,386 + -0.3 281,386 + -0.7 281,386 + +1.2 281,386 + +1.0 281,391 + +0.9 281,391 + +0.2 281,394 - +0.2 281,394 - -1.5 281,394 - +2.6 281,394 - -0.8 281,394 - +1.6 281,396 + +0.8 281,399 - +1.5 281,404 - -0.6 281,404 - +0.8 281,416 + -0.7 281,454 - MPMX20_00264 0.11 -1.2 281,461 + MPMX20_00264 0.11 +0.7 281,466 + MPMX20_00264 0.12 +0.2 281,474 - MPMX20_00264 0.12 -0.3 281,479 - MPMX20_00264 0.13 -0.8 281,499 + MPMX20_00264 0.14 +0.2 281,504 + MPMX20_00264 0.14 -0.7
Or see this region's nucleotide sequence