Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04400

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04399 and MPMX20_04400 are separated by 271 nucleotidesMPMX20_04400 and MPMX20_04401 are separated by 60 nucleotides MPMX20_04399: MPMX20_04399 - Glutathione reductase, at 4,590,385 to 4,591,737 _04399 MPMX20_04400: MPMX20_04400 - Cytoplasmic trehalase, at 4,592,009 to 4,593,658 _04400 MPMX20_04401: MPMX20_04401 - hypothetical protein, at 4,593,719 to 4,595,308 _04401 Position (kb) 4592 4593 4594Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4591.049 kb on + strand, within MPMX20_04399at 4591.062 kb on + strand, within MPMX20_04399at 4591.062 kb on + strand, within MPMX20_04399at 4591.062 kb on + strand, within MPMX20_04399at 4591.064 kb on + strand, within MPMX20_04399at 4591.070 kb on - strand, within MPMX20_04399at 4591.070 kb on - strand, within MPMX20_04399at 4591.070 kb on - strand, within MPMX20_04399at 4591.070 kb on - strand, within MPMX20_04399at 4591.106 kb on + strand, within MPMX20_04399at 4591.155 kb on + strand, within MPMX20_04399at 4591.177 kb on - strand, within MPMX20_04399at 4591.198 kb on - strand, within MPMX20_04399at 4591.231 kb on + strand, within MPMX20_04399at 4591.231 kb on + strand, within MPMX20_04399at 4591.232 kb on + strand, within MPMX20_04399at 4591.367 kb on - strand, within MPMX20_04399at 4591.478 kb on - strand, within MPMX20_04399at 4591.478 kb on - strand, within MPMX20_04399at 4591.478 kb on - strand, within MPMX20_04399at 4591.500 kb on - strand, within MPMX20_04399at 4591.518 kb on + strand, within MPMX20_04399at 4591.525 kb on + strand, within MPMX20_04399at 4591.599 kb on - strand, within MPMX20_04399at 4591.731 kb on + strandat 4591.748 kb on + strandat 4591.748 kb on + strandat 4591.759 kb on - strandat 4591.822 kb on - strandat 4591.984 kb on - strandat 4591.997 kb on - strandat 4592.007 kb on - strandat 4592.024 kb on + strandat 4592.041 kb on - strandat 4592.084 kb on - strandat 4592.138 kb on + strandat 4592.170 kb on - strandat 4592.184 kb on + strand, within MPMX20_04400at 4592.184 kb on + strand, within MPMX20_04400at 4592.192 kb on - strand, within MPMX20_04400at 4592.192 kb on - strand, within MPMX20_04400at 4592.192 kb on - strand, within MPMX20_04400at 4592.192 kb on - strand, within MPMX20_04400at 4592.192 kb on - strand, within MPMX20_04400at 4592.192 kb on - strand, within MPMX20_04400at 4592.192 kb on - strand, within MPMX20_04400at 4592.192 kb on - strand, within MPMX20_04400at 4592.194 kb on + strand, within MPMX20_04400at 4592.211 kb on + strand, within MPMX20_04400at 4592.211 kb on + strand, within MPMX20_04400at 4592.230 kb on + strand, within MPMX20_04400at 4592.252 kb on + strand, within MPMX20_04400at 4592.304 kb on - strand, within MPMX20_04400at 4592.343 kb on + strand, within MPMX20_04400at 4592.359 kb on + strand, within MPMX20_04400at 4592.359 kb on + strand, within MPMX20_04400at 4592.367 kb on - strand, within MPMX20_04400at 4592.393 kb on - strand, within MPMX20_04400at 4592.427 kb on - strand, within MPMX20_04400at 4592.458 kb on + strand, within MPMX20_04400at 4592.458 kb on + strand, within MPMX20_04400at 4592.458 kb on + strand, within MPMX20_04400at 4592.459 kb on + strand, within MPMX20_04400at 4592.488 kb on + strand, within MPMX20_04400at 4592.488 kb on + strand, within MPMX20_04400at 4592.496 kb on - strand, within MPMX20_04400at 4592.496 kb on - strand, within MPMX20_04400at 4592.496 kb on - strand, within MPMX20_04400at 4592.564 kb on - strand, within MPMX20_04400at 4592.568 kb on - strand, within MPMX20_04400at 4592.592 kb on - strand, within MPMX20_04400at 4592.634 kb on - strand, within MPMX20_04400at 4592.639 kb on - strand, within MPMX20_04400at 4592.644 kb on - strand, within MPMX20_04400at 4592.706 kb on + strand, within MPMX20_04400at 4592.707 kb on + strand, within MPMX20_04400at 4592.716 kb on + strand, within MPMX20_04400at 4592.723 kb on - strand, within MPMX20_04400at 4592.730 kb on + strand, within MPMX20_04400at 4592.730 kb on + strand, within MPMX20_04400at 4592.730 kb on + strand, within MPMX20_04400at 4592.737 kb on + strand, within MPMX20_04400at 4592.738 kb on - strand, within MPMX20_04400at 4592.738 kb on - strand, within MPMX20_04400at 4592.738 kb on - strand, within MPMX20_04400at 4592.738 kb on - strand, within MPMX20_04400at 4592.738 kb on - strand, within MPMX20_04400at 4592.742 kb on + strand, within MPMX20_04400at 4592.742 kb on + strand, within MPMX20_04400at 4592.742 kb on + strand, within MPMX20_04400at 4592.750 kb on - strand, within MPMX20_04400at 4592.750 kb on - strand, within MPMX20_04400at 4592.750 kb on - strand, within MPMX20_04400at 4592.750 kb on - strand, within MPMX20_04400at 4592.750 kb on - strand, within MPMX20_04400at 4592.750 kb on - strand, within MPMX20_04400at 4592.752 kb on + strand, within MPMX20_04400at 4592.770 kb on - strand, within MPMX20_04400at 4592.778 kb on - strand, within MPMX20_04400at 4592.818 kb on - strand, within MPMX20_04400at 4592.846 kb on + strand, within MPMX20_04400at 4592.871 kb on + strand, within MPMX20_04400at 4592.871 kb on + strand, within MPMX20_04400at 4593.008 kb on - strand, within MPMX20_04400at 4593.051 kb on - strand, within MPMX20_04400at 4593.235 kb on + strand, within MPMX20_04400at 4593.247 kb on + strand, within MPMX20_04400at 4593.250 kb on - strand, within MPMX20_04400at 4593.255 kb on - strand, within MPMX20_04400at 4593.255 kb on - strand, within MPMX20_04400at 4593.257 kb on - strand, within MPMX20_04400at 4593.291 kb on + strand, within MPMX20_04400at 4593.291 kb on + strand, within MPMX20_04400at 4593.309 kb on - strand, within MPMX20_04400at 4593.367 kb on + strand, within MPMX20_04400at 4593.410 kb on - strand, within MPMX20_04400at 4593.445 kb on + strand, within MPMX20_04400at 4593.453 kb on - strand, within MPMX20_04400at 4593.476 kb on + strand, within MPMX20_04400at 4593.476 kb on + strand, within MPMX20_04400at 4593.484 kb on - strand, within MPMX20_04400at 4593.515 kb on + strandat 4593.520 kb on + strandat 4593.527 kb on - strandat 4593.527 kb on - strandat 4593.552 kb on + strandat 4593.552 kb on + strandat 4593.560 kb on - strandat 4593.560 kb on - strandat 4593.571 kb on + strandat 4593.660 kb on - strandat 4593.817 kb on - strandat 4593.828 kb on + strandat 4593.857 kb on - strandat 4593.897 kb on + strand, within MPMX20_04401at 4593.917 kb on - strand, within MPMX20_04401at 4593.972 kb on + strand, within MPMX20_04401at 4593.993 kb on + strand, within MPMX20_04401at 4593.995 kb on + strand, within MPMX20_04401at 4594.044 kb on + strand, within MPMX20_04401at 4594.047 kb on - strand, within MPMX20_04401at 4594.121 kb on + strand, within MPMX20_04401at 4594.121 kb on + strand, within MPMX20_04401at 4594.171 kb on + strand, within MPMX20_04401at 4594.173 kb on + strand, within MPMX20_04401at 4594.181 kb on - strand, within MPMX20_04401at 4594.237 kb on + strand, within MPMX20_04401at 4594.245 kb on - strand, within MPMX20_04401at 4594.281 kb on - strand, within MPMX20_04401at 4594.309 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.318 kb on + strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.326 kb on - strand, within MPMX20_04401at 4594.419 kb on - strand, within MPMX20_04401at 4594.486 kb on + strand, within MPMX20_04401at 4594.511 kb on + strand, within MPMX20_04401at 4594.519 kb on - strand, within MPMX20_04401at 4594.556 kb on + strand, within MPMX20_04401at 4594.575 kb on + strand, within MPMX20_04401at 4594.575 kb on + strand, within MPMX20_04401at 4594.583 kb on - strand, within MPMX20_04401at 4594.631 kb on - strand, within MPMX20_04401at 4594.633 kb on + strand, within MPMX20_04401at 4594.643 kb on - strand, within MPMX20_04401

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,591,049 + MPMX20_04399 0.49 -0.1
4,591,062 + MPMX20_04399 0.50 -0.7
4,591,062 + MPMX20_04399 0.50 +0.6
4,591,062 + MPMX20_04399 0.50 -0.2
4,591,064 + MPMX20_04399 0.50 -0.5
4,591,070 - MPMX20_04399 0.51 -2.2
4,591,070 - MPMX20_04399 0.51 +0.9
4,591,070 - MPMX20_04399 0.51 -0.8
4,591,070 - MPMX20_04399 0.51 -1.8
4,591,106 + MPMX20_04399 0.53 +0.2
4,591,155 + MPMX20_04399 0.57 -1.6
4,591,177 - MPMX20_04399 0.59 -0.6
4,591,198 - MPMX20_04399 0.60 -2.1
4,591,231 + MPMX20_04399 0.63 -0.2
4,591,231 + MPMX20_04399 0.63 -0.3
4,591,232 + MPMX20_04399 0.63 -0.0
4,591,367 - MPMX20_04399 0.73 +0.2
4,591,478 - MPMX20_04399 0.81 +0.3
4,591,478 - MPMX20_04399 0.81 -1.4
4,591,478 - MPMX20_04399 0.81 -1.3
4,591,500 - MPMX20_04399 0.82 -0.1
4,591,518 + MPMX20_04399 0.84 +0.5
4,591,525 + MPMX20_04399 0.84 -2.2
4,591,599 - MPMX20_04399 0.90 -0.5
4,591,731 + +1.4
4,591,748 + -0.3
4,591,748 + -0.8
4,591,759 - +0.5
4,591,822 - -0.7
4,591,984 - +0.3
4,591,997 - -0.4
4,592,007 - -0.6
4,592,024 + +0.0
4,592,041 - +0.9
4,592,084 - -3.3
4,592,138 + -0.6
4,592,170 - -1.1
4,592,184 + MPMX20_04400 0.11 -1.0
4,592,184 + MPMX20_04400 0.11 +0.2
4,592,192 - MPMX20_04400 0.11 +0.8
4,592,192 - MPMX20_04400 0.11 -0.7
4,592,192 - MPMX20_04400 0.11 -0.5
4,592,192 - MPMX20_04400 0.11 +0.3
4,592,192 - MPMX20_04400 0.11 +1.8
4,592,192 - MPMX20_04400 0.11 -1.3
4,592,192 - MPMX20_04400 0.11 -1.4
4,592,192 - MPMX20_04400 0.11 -0.7
4,592,194 + MPMX20_04400 0.11 +0.9
4,592,211 + MPMX20_04400 0.12 -0.4
4,592,211 + MPMX20_04400 0.12 -0.6
4,592,230 + MPMX20_04400 0.13 -0.5
4,592,252 + MPMX20_04400 0.15 +0.3
4,592,304 - MPMX20_04400 0.18 +0.4
4,592,343 + MPMX20_04400 0.20 +1.5
4,592,359 + MPMX20_04400 0.21 +0.2
4,592,359 + MPMX20_04400 0.21 -0.2
4,592,367 - MPMX20_04400 0.22 -1.6
4,592,393 - MPMX20_04400 0.23 +1.2
4,592,427 - MPMX20_04400 0.25 +0.4
4,592,458 + MPMX20_04400 0.27 -1.4
4,592,458 + MPMX20_04400 0.27 +0.5
4,592,458 + MPMX20_04400 0.27 +0.6
4,592,459 + MPMX20_04400 0.27 -1.2
4,592,488 + MPMX20_04400 0.29 +0.6
4,592,488 + MPMX20_04400 0.29 +0.2
4,592,496 - MPMX20_04400 0.30 +0.3
4,592,496 - MPMX20_04400 0.30 -0.8
4,592,496 - MPMX20_04400 0.30 -2.2
4,592,564 - MPMX20_04400 0.34 +0.2
4,592,568 - MPMX20_04400 0.34 +1.5
4,592,592 - MPMX20_04400 0.35 -0.4
4,592,634 - MPMX20_04400 0.38 +0.9
4,592,639 - MPMX20_04400 0.38 -1.2
4,592,644 - MPMX20_04400 0.38 +3.1
4,592,706 + MPMX20_04400 0.42 +0.8
4,592,707 + MPMX20_04400 0.42 -0.7
4,592,716 + MPMX20_04400 0.43 -0.7
4,592,723 - MPMX20_04400 0.43 +1.5
4,592,730 + MPMX20_04400 0.44 -0.9
4,592,730 + MPMX20_04400 0.44 -1.0
4,592,730 + MPMX20_04400 0.44 -2.6
4,592,737 + MPMX20_04400 0.44 -0.5
4,592,738 - MPMX20_04400 0.44 +0.9
4,592,738 - MPMX20_04400 0.44 +0.2
4,592,738 - MPMX20_04400 0.44 +0.5
4,592,738 - MPMX20_04400 0.44 +2.5
4,592,738 - MPMX20_04400 0.44 +0.6
4,592,742 + MPMX20_04400 0.44 -0.7
4,592,742 + MPMX20_04400 0.44 +3.9
4,592,742 + MPMX20_04400 0.44 +0.2
4,592,750 - MPMX20_04400 0.45 -0.7
4,592,750 - MPMX20_04400 0.45 +2.5
4,592,750 - MPMX20_04400 0.45 -0.8
4,592,750 - MPMX20_04400 0.45 +0.8
4,592,750 - MPMX20_04400 0.45 +0.3
4,592,750 - MPMX20_04400 0.45 +0.9
4,592,752 + MPMX20_04400 0.45 -0.1
4,592,770 - MPMX20_04400 0.46 -0.4
4,592,778 - MPMX20_04400 0.47 +1.5
4,592,818 - MPMX20_04400 0.49 +0.3
4,592,846 + MPMX20_04400 0.51 -0.4
4,592,871 + MPMX20_04400 0.52 -0.5
4,592,871 + MPMX20_04400 0.52 +0.7
4,593,008 - MPMX20_04400 0.61 +1.2
4,593,051 - MPMX20_04400 0.63 -1.9
4,593,235 + MPMX20_04400 0.74 -1.0
4,593,247 + MPMX20_04400 0.75 -0.8
4,593,250 - MPMX20_04400 0.75 -0.1
4,593,255 - MPMX20_04400 0.76 -0.8
4,593,255 - MPMX20_04400 0.76 +0.1
4,593,257 - MPMX20_04400 0.76 +2.9
4,593,291 + MPMX20_04400 0.78 -1.0
4,593,291 + MPMX20_04400 0.78 +1.2
4,593,309 - MPMX20_04400 0.79 -0.2
4,593,367 + MPMX20_04400 0.82 +1.5
4,593,410 - MPMX20_04400 0.85 -0.5
4,593,445 + MPMX20_04400 0.87 -1.5
4,593,453 - MPMX20_04400 0.88 +1.4
4,593,476 + MPMX20_04400 0.89 -0.2
4,593,476 + MPMX20_04400 0.89 -0.1
4,593,484 - MPMX20_04400 0.89 +0.4
4,593,515 + -0.2
4,593,520 + -0.3
4,593,527 - +0.5
4,593,527 - +0.5
4,593,552 + -1.1
4,593,552 + +1.5
4,593,560 - +0.5
4,593,560 - -0.3
4,593,571 + -0.1
4,593,660 - -1.5
4,593,817 - +0.3
4,593,828 + -2.9
4,593,857 - -0.1
4,593,897 + MPMX20_04401 0.11 -0.0
4,593,917 - MPMX20_04401 0.12 +0.0
4,593,972 + MPMX20_04401 0.16 +0.6
4,593,993 + MPMX20_04401 0.17 +3.3
4,593,995 + MPMX20_04401 0.17 -0.7
4,594,044 + MPMX20_04401 0.20 +0.9
4,594,047 - MPMX20_04401 0.21 +0.9
4,594,121 + MPMX20_04401 0.25 -0.2
4,594,121 + MPMX20_04401 0.25 -0.8
4,594,171 + MPMX20_04401 0.28 -0.7
4,594,173 + MPMX20_04401 0.29 +0.2
4,594,181 - MPMX20_04401 0.29 +0.7
4,594,237 + MPMX20_04401 0.33 -0.2
4,594,245 - MPMX20_04401 0.33 +0.0
4,594,281 - MPMX20_04401 0.35 -0.3
4,594,309 + MPMX20_04401 0.37 -1.2
4,594,318 + MPMX20_04401 0.38 -1.2
4,594,318 + MPMX20_04401 0.38 -0.7
4,594,318 + MPMX20_04401 0.38 +1.2
4,594,318 + MPMX20_04401 0.38 +2.5
4,594,318 + MPMX20_04401 0.38 +0.9
4,594,318 + MPMX20_04401 0.38 +0.5
4,594,318 + MPMX20_04401 0.38 -1.7
4,594,318 + MPMX20_04401 0.38 +0.2
4,594,318 + MPMX20_04401 0.38 -0.0
4,594,318 + MPMX20_04401 0.38 +1.8
4,594,318 + MPMX20_04401 0.38 -0.1
4,594,318 + MPMX20_04401 0.38 -0.1
4,594,318 + MPMX20_04401 0.38 -0.3
4,594,318 + MPMX20_04401 0.38 +1.5
4,594,318 + MPMX20_04401 0.38 +0.6
4,594,318 + MPMX20_04401 0.38 +0.9
4,594,318 + MPMX20_04401 0.38 +0.4
4,594,318 + MPMX20_04401 0.38 -0.7
4,594,318 + MPMX20_04401 0.38 +0.1
4,594,318 + MPMX20_04401 0.38 +1.9
4,594,318 + MPMX20_04401 0.38 -1.0
4,594,318 + MPMX20_04401 0.38 +0.2
4,594,326 - MPMX20_04401 0.38 +1.4
4,594,326 - MPMX20_04401 0.38 +2.0
4,594,326 - MPMX20_04401 0.38 +1.5
4,594,326 - MPMX20_04401 0.38 -0.8
4,594,326 - MPMX20_04401 0.38 +0.5
4,594,326 - MPMX20_04401 0.38 +2.5
4,594,326 - MPMX20_04401 0.38 -0.5
4,594,326 - MPMX20_04401 0.38 -0.1
4,594,326 - MPMX20_04401 0.38 +0.2
4,594,326 - MPMX20_04401 0.38 +0.7
4,594,326 - MPMX20_04401 0.38 +0.0
4,594,326 - MPMX20_04401 0.38 +0.6
4,594,326 - MPMX20_04401 0.38 +2.5
4,594,326 - MPMX20_04401 0.38 +1.2
4,594,419 - MPMX20_04401 0.44 -0.4
4,594,486 + MPMX20_04401 0.48 -1.0
4,594,511 + MPMX20_04401 0.50 -2.2
4,594,519 - MPMX20_04401 0.50 +1.2
4,594,556 + MPMX20_04401 0.53 +1.9
4,594,575 + MPMX20_04401 0.54 -1.0
4,594,575 + MPMX20_04401 0.54 -0.5
4,594,583 - MPMX20_04401 0.54 +0.8
4,594,631 - MPMX20_04401 0.57 -0.5
4,594,633 + MPMX20_04401 0.57 -0.6
4,594,643 - MPMX20_04401 0.58 -0.1

Or see this region's nucleotide sequence