Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03798 and MPMX20_03799 are separated by 208 nucleotides MPMX20_03799 and MPMX20_03800 are separated by 802 nucleotides
MPMX20_03798: MPMX20_03798 - Agmatinase, at 4,002,472 to 4,003,392
_03798
MPMX20_03799: MPMX20_03799 - Biosynthetic arginine decarboxylase, at 4,003,601 to 4,005,577
_03799
MPMX20_03800: MPMX20_03800 - S-adenosylmethionine synthase, at 4,006,380 to 4,007,534
_03800
Position (kb)
4003
4004
4005
4006 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8
9 at 4002.603 kb on - strand, within MPMX20_03798 at 4002.634 kb on + strand, within MPMX20_03798 at 4002.687 kb on + strand, within MPMX20_03798 at 4002.695 kb on - strand, within MPMX20_03798 at 4002.770 kb on + strand, within MPMX20_03798 at 4002.816 kb on - strand, within MPMX20_03798 at 4002.817 kb on - strand, within MPMX20_03798 at 4002.855 kb on + strand, within MPMX20_03798 at 4002.859 kb on - strand, within MPMX20_03798 at 4002.864 kb on - strand, within MPMX20_03798 at 4002.865 kb on + strand, within MPMX20_03798 at 4002.873 kb on - strand, within MPMX20_03798 at 4002.887 kb on + strand, within MPMX20_03798 at 4002.887 kb on + strand, within MPMX20_03798 at 4002.887 kb on + strand, within MPMX20_03798 at 4002.887 kb on + strand, within MPMX20_03798 at 4002.895 kb on - strand, within MPMX20_03798 at 4002.895 kb on - strand, within MPMX20_03798 at 4002.939 kb on - strand, within MPMX20_03798 at 4003.015 kb on + strand, within MPMX20_03798 at 4003.059 kb on + strand, within MPMX20_03798 at 4003.072 kb on + strand, within MPMX20_03798 at 4003.072 kb on + strand, within MPMX20_03798 at 4003.111 kb on + strand, within MPMX20_03798 at 4003.111 kb on + strand, within MPMX20_03798 at 4003.111 kb on + strand, within MPMX20_03798 at 4003.117 kb on + strand, within MPMX20_03798 at 4003.125 kb on - strand, within MPMX20_03798 at 4003.202 kb on + strand, within MPMX20_03798 at 4003.205 kb on - strand, within MPMX20_03798 at 4003.210 kb on - strand, within MPMX20_03798 at 4003.261 kb on - strand, within MPMX20_03798 at 4003.279 kb on + strand, within MPMX20_03798 at 4003.319 kb on - strand at 4003.393 kb on + strand at 4003.401 kb on - strand at 4003.401 kb on - strand at 4003.411 kb on - strand at 4003.418 kb on + strand at 4003.535 kb on + strand at 4003.543 kb on - strand at 4003.543 kb on - strand at 4003.546 kb on + strand at 4003.555 kb on - strand at 4003.582 kb on - strand at 4003.584 kb on + strand at 4003.584 kb on + strand at 4003.627 kb on - strand at 4003.638 kb on + strand at 4003.676 kb on + strand at 4003.763 kb on + strand at 4003.773 kb on + strand at 4003.778 kb on + strand at 4003.783 kb on + strand at 4003.799 kb on + strand, within MPMX20_03799 at 4003.825 kb on - strand, within MPMX20_03799 at 4003.846 kb on + strand, within MPMX20_03799 at 4003.854 kb on - strand, within MPMX20_03799 at 4003.878 kb on + strand, within MPMX20_03799 at 4003.929 kb on + strand, within MPMX20_03799 at 4003.997 kb on + strand, within MPMX20_03799 at 4004.014 kb on - strand, within MPMX20_03799 at 4004.036 kb on + strand, within MPMX20_03799 at 4004.066 kb on - strand, within MPMX20_03799 at 4004.149 kb on - strand, within MPMX20_03799 at 4004.149 kb on - strand, within MPMX20_03799 at 4004.178 kb on - strand, within MPMX20_03799 at 4004.178 kb on - strand, within MPMX20_03799 at 4004.191 kb on + strand, within MPMX20_03799 at 4004.197 kb on + strand, within MPMX20_03799 at 4004.235 kb on + strand, within MPMX20_03799 at 4004.243 kb on - strand, within MPMX20_03799 at 4004.243 kb on - strand, within MPMX20_03799 at 4004.351 kb on + strand, within MPMX20_03799 at 4004.367 kb on - strand, within MPMX20_03799 at 4004.408 kb on - strand, within MPMX20_03799 at 4004.464 kb on + strand, within MPMX20_03799 at 4004.530 kb on + strand, within MPMX20_03799 at 4004.541 kb on - strand, within MPMX20_03799 at 4004.592 kb on - strand, within MPMX20_03799 at 4004.592 kb on - strand, within MPMX20_03799 at 4004.603 kb on + strand, within MPMX20_03799 at 4004.603 kb on + strand, within MPMX20_03799 at 4004.682 kb on - strand, within MPMX20_03799 at 4004.709 kb on + strand, within MPMX20_03799 at 4004.776 kb on + strand, within MPMX20_03799 at 4004.776 kb on + strand, within MPMX20_03799 at 4004.786 kb on + strand, within MPMX20_03799 at 4004.929 kb on + strand, within MPMX20_03799 at 4004.936 kb on + strand, within MPMX20_03799 at 4005.052 kb on + strand, within MPMX20_03799 at 4005.052 kb on + strand, within MPMX20_03799 at 4005.060 kb on - strand, within MPMX20_03799 at 4005.060 kb on - strand, within MPMX20_03799 at 4005.081 kb on - strand, within MPMX20_03799 at 4005.083 kb on + strand, within MPMX20_03799 at 4005.108 kb on + strand, within MPMX20_03799 at 4005.164 kb on - strand, within MPMX20_03799 at 4005.204 kb on + strand, within MPMX20_03799 at 4005.303 kb on + strand, within MPMX20_03799 at 4005.303 kb on + strand, within MPMX20_03799 at 4005.303 kb on + strand, within MPMX20_03799 at 4005.303 kb on + strand, within MPMX20_03799 at 4005.305 kb on + strand, within MPMX20_03799 at 4005.308 kb on + strand, within MPMX20_03799 at 4005.311 kb on - strand, within MPMX20_03799 at 4005.323 kb on + strand, within MPMX20_03799 at 4005.329 kb on + strand, within MPMX20_03799 at 4005.337 kb on - strand, within MPMX20_03799 at 4005.393 kb on - strand at 4005.415 kb on - strand at 4005.415 kb on - strand at 4005.429 kb on + strand at 4005.480 kb on - strand at 4005.487 kb on + strand at 4005.487 kb on + strand at 4005.495 kb on - strand at 4005.631 kb on + strand at 4005.637 kb on - strand at 4005.637 kb on - strand at 4005.694 kb on - strand at 4005.780 kb on - strand at 4005.786 kb on - strand at 4005.806 kb on - strand at 4005.808 kb on - strand at 4005.826 kb on - strand at 4005.828 kb on + strand at 4005.854 kb on - strand at 4005.854 kb on - strand at 4005.854 kb on - strand at 4005.854 kb on - strand at 4005.856 kb on + strand at 4005.856 kb on + strand at 4005.872 kb on + strand at 4006.022 kb on + strand at 4006.022 kb on + strand at 4006.030 kb on - strand at 4006.030 kb on - strand at 4006.080 kb on - strand at 4006.080 kb on - strand at 4006.182 kb on + strand at 4006.190 kb on - strand at 4006.246 kb on + strand at 4006.301 kb on + strand at 4006.329 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,002,603 - MPMX20_03798 0.14 +0.4 4,002,634 + MPMX20_03798 0.18 -0.6 4,002,687 + MPMX20_03798 0.23 -2.4 4,002,695 - MPMX20_03798 0.24 -0.4 4,002,770 + MPMX20_03798 0.32 -0.7 4,002,816 - MPMX20_03798 0.37 -1.0 4,002,817 - MPMX20_03798 0.37 -0.2 4,002,855 + MPMX20_03798 0.42 -1.5 4,002,859 - MPMX20_03798 0.42 -0.2 4,002,864 - MPMX20_03798 0.43 +0.9 4,002,865 + MPMX20_03798 0.43 -2.5 4,002,873 - MPMX20_03798 0.44 -1.4 4,002,887 + MPMX20_03798 0.45 -2.8 4,002,887 + MPMX20_03798 0.45 +0.4 4,002,887 + MPMX20_03798 0.45 +0.1 4,002,887 + MPMX20_03798 0.45 -1.3 4,002,895 - MPMX20_03798 0.46 -1.6 4,002,895 - MPMX20_03798 0.46 +0.3 4,002,939 - MPMX20_03798 0.51 -2.9 4,003,015 + MPMX20_03798 0.59 +1.2 4,003,059 + MPMX20_03798 0.64 -0.4 4,003,072 + MPMX20_03798 0.65 -1.0 4,003,072 + MPMX20_03798 0.65 -1.4 4,003,111 + MPMX20_03798 0.69 -0.7 4,003,111 + MPMX20_03798 0.69 -0.7 4,003,111 + MPMX20_03798 0.69 -0.6 4,003,117 + MPMX20_03798 0.70 -0.4 4,003,125 - MPMX20_03798 0.71 +0.8 4,003,202 + MPMX20_03798 0.79 +0.1 4,003,205 - MPMX20_03798 0.80 -0.7 4,003,210 - MPMX20_03798 0.80 -0.8 4,003,261 - MPMX20_03798 0.86 -1.2 4,003,279 + MPMX20_03798 0.88 -0.4 4,003,319 - -1.2 4,003,393 + -1.0 4,003,401 - -0.4 4,003,401 - -0.6 4,003,411 - -0.2 4,003,418 + -1.4 4,003,535 + +0.1 4,003,543 - -0.2 4,003,543 - -0.5 4,003,546 + -0.2 4,003,555 - +0.6 4,003,582 - -0.6 4,003,584 + +0.4 4,003,584 + +0.7 4,003,627 - +0.6 4,003,638 + +1.4 4,003,676 + +0.8 4,003,763 + -0.2 4,003,773 + +1.1 4,003,778 + +0.8 4,003,783 + -0.7 4,003,799 + MPMX20_03799 0.10 -0.2 4,003,825 - MPMX20_03799 0.11 +0.0 4,003,846 + MPMX20_03799 0.12 -1.4 4,003,854 - MPMX20_03799 0.13 +0.4 4,003,878 + MPMX20_03799 0.14 -1.5 4,003,929 + MPMX20_03799 0.17 +0.1 4,003,997 + MPMX20_03799 0.20 -0.7 4,004,014 - MPMX20_03799 0.21 -1.2 4,004,036 + MPMX20_03799 0.22 -0.3 4,004,066 - MPMX20_03799 0.24 -2.0 4,004,149 - MPMX20_03799 0.28 +0.8 4,004,149 - MPMX20_03799 0.28 +2.4 4,004,178 - MPMX20_03799 0.29 +0.7 4,004,178 - MPMX20_03799 0.29 -0.4 4,004,191 + MPMX20_03799 0.30 +0.4 4,004,197 + MPMX20_03799 0.30 +1.7 4,004,235 + MPMX20_03799 0.32 +1.0 4,004,243 - MPMX20_03799 0.32 +0.1 4,004,243 - MPMX20_03799 0.32 +0.8 4,004,351 + MPMX20_03799 0.38 +0.8 4,004,367 - MPMX20_03799 0.39 -0.2 4,004,408 - MPMX20_03799 0.41 -0.6 4,004,464 + MPMX20_03799 0.44 -0.9 4,004,530 + MPMX20_03799 0.47 -0.8 4,004,541 - MPMX20_03799 0.48 +3.0 4,004,592 - MPMX20_03799 0.50 +8.8 4,004,592 - MPMX20_03799 0.50 -2.3 4,004,603 + MPMX20_03799 0.51 -0.2 4,004,603 + MPMX20_03799 0.51 -1.1 4,004,682 - MPMX20_03799 0.55 +2.4 4,004,709 + MPMX20_03799 0.56 +1.8 4,004,776 + MPMX20_03799 0.59 +0.8 4,004,776 + MPMX20_03799 0.59 +1.0 4,004,786 + MPMX20_03799 0.60 +0.9 4,004,929 + MPMX20_03799 0.67 -0.7 4,004,936 + MPMX20_03799 0.68 +2.4 4,005,052 + MPMX20_03799 0.73 -0.6 4,005,052 + MPMX20_03799 0.73 +1.1 4,005,060 - MPMX20_03799 0.74 -0.7 4,005,060 - MPMX20_03799 0.74 -2.3 4,005,081 - MPMX20_03799 0.75 +1.1 4,005,083 + MPMX20_03799 0.75 +1.4 4,005,108 + MPMX20_03799 0.76 +0.4 4,005,164 - MPMX20_03799 0.79 -1.7 4,005,204 + MPMX20_03799 0.81 +0.7 4,005,303 + MPMX20_03799 0.86 +0.7 4,005,303 + MPMX20_03799 0.86 -1.9 4,005,303 + MPMX20_03799 0.86 +2.4 4,005,303 + MPMX20_03799 0.86 -2.0 4,005,305 + MPMX20_03799 0.86 -2.4 4,005,308 + MPMX20_03799 0.86 +1.4 4,005,311 - MPMX20_03799 0.86 -0.0 4,005,323 + MPMX20_03799 0.87 -1.7 4,005,329 + MPMX20_03799 0.87 -0.9 4,005,337 - MPMX20_03799 0.88 -0.0 4,005,393 - -1.3 4,005,415 - +0.1 4,005,415 - -0.0 4,005,429 + -0.2 4,005,480 - -1.3 4,005,487 + -0.2 4,005,487 + -0.1 4,005,495 - -0.4 4,005,631 + +0.6 4,005,637 - +0.4 4,005,637 - +0.2 4,005,694 - +0.4 4,005,780 - +2.0 4,005,786 - +0.0 4,005,806 - -2.2 4,005,808 - +0.1 4,005,826 - -1.2 4,005,828 + -0.6 4,005,854 - -0.9 4,005,854 - -0.2 4,005,854 - +1.4 4,005,854 - +0.3 4,005,856 + +0.1 4,005,856 + -0.7 4,005,872 + -1.0 4,006,022 + +2.4 4,006,022 + -0.7 4,006,030 - +0.4 4,006,030 - -0.8 4,006,080 - +0.3 4,006,080 - -0.1 4,006,182 + -0.6 4,006,190 - +0.3 4,006,246 + -0.6 4,006,301 + -1.2 4,006,329 + +0.8
Or see this region's nucleotide sequence