Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03373 and MPMX20_03374 are separated by 290 nucleotides MPMX20_03374 and MPMX20_03375 are separated by 11 nucleotides
MPMX20_03373: MPMX20_03373 - Myo-inositol 2-dehydrogenase, at 3,550,498 to 3,551,484
_03373
MPMX20_03374: MPMX20_03374 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, at 3,551,775 to 3,553,700
_03374
MPMX20_03375: MPMX20_03375 - Putative 3-oxopropanoate dehydrogenase, at 3,553,712 to 3,555,217
_03375
Position (kb)
3551
3552
3553
3554 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3550.914 kb on - strand, within MPMX20_03373 at 3551.039 kb on - strand, within MPMX20_03373 at 3551.039 kb on - strand, within MPMX20_03373 at 3551.086 kb on - strand, within MPMX20_03373 at 3551.200 kb on - strand, within MPMX20_03373 at 3551.201 kb on - strand, within MPMX20_03373 at 3551.269 kb on + strand, within MPMX20_03373 at 3551.287 kb on - strand, within MPMX20_03373 at 3551.322 kb on + strand, within MPMX20_03373 at 3551.322 kb on + strand, within MPMX20_03373 at 3551.323 kb on + strand, within MPMX20_03373 at 3551.330 kb on - strand, within MPMX20_03373 at 3551.331 kb on - strand, within MPMX20_03373 at 3551.332 kb on + strand, within MPMX20_03373 at 3551.340 kb on - strand, within MPMX20_03373 at 3551.391 kb on + strand at 3551.399 kb on - strand at 3551.399 kb on - strand at 3551.408 kb on + strand at 3551.408 kb on + strand at 3551.416 kb on - strand at 3551.459 kb on + strand at 3551.501 kb on + strand at 3551.698 kb on + strand at 3551.925 kb on + strand at 3551.939 kb on - strand at 3552.034 kb on + strand, within MPMX20_03374 at 3552.118 kb on + strand, within MPMX20_03374 at 3552.173 kb on + strand, within MPMX20_03374 at 3552.221 kb on + strand, within MPMX20_03374 at 3552.252 kb on - strand, within MPMX20_03374 at 3552.297 kb on + strand, within MPMX20_03374 at 3552.305 kb on - strand, within MPMX20_03374 at 3552.318 kb on + strand, within MPMX20_03374 at 3552.320 kb on - strand, within MPMX20_03374 at 3552.326 kb on - strand, within MPMX20_03374 at 3552.368 kb on + strand, within MPMX20_03374 at 3552.381 kb on - strand, within MPMX20_03374 at 3552.468 kb on - strand, within MPMX20_03374 at 3552.539 kb on - strand, within MPMX20_03374 at 3552.610 kb on - strand, within MPMX20_03374 at 3552.877 kb on - strand, within MPMX20_03374 at 3552.886 kb on - strand, within MPMX20_03374 at 3552.886 kb on - strand, within MPMX20_03374 at 3553.002 kb on - strand, within MPMX20_03374 at 3553.048 kb on + strand, within MPMX20_03374 at 3553.070 kb on + strand, within MPMX20_03374 at 3553.099 kb on - strand, within MPMX20_03374 at 3553.100 kb on + strand, within MPMX20_03374 at 3553.101 kb on + strand, within MPMX20_03374 at 3553.113 kb on + strand, within MPMX20_03374 at 3553.220 kb on + strand, within MPMX20_03374 at 3553.291 kb on + strand, within MPMX20_03374 at 3553.338 kb on + strand, within MPMX20_03374 at 3553.357 kb on - strand, within MPMX20_03374 at 3553.359 kb on - strand, within MPMX20_03374 at 3553.432 kb on + strand, within MPMX20_03374 at 3553.467 kb on - strand, within MPMX20_03374 at 3553.487 kb on + strand, within MPMX20_03374 at 3553.523 kb on - strand at 3553.523 kb on - strand at 3553.523 kb on - strand at 3553.543 kb on - strand at 3553.646 kb on - strand at 3553.676 kb on - strand at 3553.705 kb on - strand at 3553.705 kb on - strand at 3553.730 kb on + strand at 3553.774 kb on + strand at 3554.005 kb on + strand, within MPMX20_03375 at 3554.018 kb on + strand, within MPMX20_03375 at 3554.018 kb on + strand, within MPMX20_03375 at 3554.026 kb on - strand, within MPMX20_03375 at 3554.026 kb on - strand, within MPMX20_03375 at 3554.026 kb on - strand, within MPMX20_03375 at 3554.088 kb on + strand, within MPMX20_03375 at 3554.115 kb on - strand, within MPMX20_03375 at 3554.115 kb on - strand, within MPMX20_03375 at 3554.115 kb on - strand, within MPMX20_03375 at 3554.161 kb on - strand, within MPMX20_03375 at 3554.164 kb on - strand, within MPMX20_03375 at 3554.202 kb on + strand, within MPMX20_03375 at 3554.207 kb on + strand, within MPMX20_03375 at 3554.215 kb on - strand, within MPMX20_03375 at 3554.217 kb on + strand, within MPMX20_03375 at 3554.217 kb on + strand, within MPMX20_03375 at 3554.225 kb on - strand, within MPMX20_03375 at 3554.225 kb on - strand, within MPMX20_03375 at 3554.235 kb on - strand, within MPMX20_03375 at 3554.270 kb on + strand, within MPMX20_03375 at 3554.270 kb on + strand, within MPMX20_03375 at 3554.278 kb on - strand, within MPMX20_03375 at 3554.329 kb on + strand, within MPMX20_03375 at 3554.337 kb on + strand, within MPMX20_03375 at 3554.345 kb on - strand, within MPMX20_03375 at 3554.393 kb on + strand, within MPMX20_03375 at 3554.500 kb on + strand, within MPMX20_03375 at 3554.536 kb on + strand, within MPMX20_03375 at 3554.544 kb on - strand, within MPMX20_03375 at 3554.544 kb on - strand, within MPMX20_03375 at 3554.572 kb on + strand, within MPMX20_03375 at 3554.611 kb on + strand, within MPMX20_03375 at 3554.646 kb on - strand, within MPMX20_03375
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,550,914 - MPMX20_03373 0.42 -1.6 3,551,039 - MPMX20_03373 0.55 +0.9 3,551,039 - MPMX20_03373 0.55 -0.0 3,551,086 - MPMX20_03373 0.60 +1.1 3,551,200 - MPMX20_03373 0.71 -0.7 3,551,201 - MPMX20_03373 0.71 +0.2 3,551,269 + MPMX20_03373 0.78 +2.5 3,551,287 - MPMX20_03373 0.80 -1.0 3,551,322 + MPMX20_03373 0.83 +1.1 3,551,322 + MPMX20_03373 0.83 -1.2 3,551,323 + MPMX20_03373 0.84 -0.8 3,551,330 - MPMX20_03373 0.84 -0.0 3,551,331 - MPMX20_03373 0.84 +0.6 3,551,332 + MPMX20_03373 0.84 -0.1 3,551,340 - MPMX20_03373 0.85 -0.0 3,551,391 + -2.5 3,551,399 - -0.8 3,551,399 - -0.9 3,551,408 + -0.3 3,551,408 + +0.2 3,551,416 - -1.0 3,551,459 + -1.8 3,551,501 + +0.3 3,551,698 + -2.4 3,551,925 + +0.4 3,551,939 - +0.8 3,552,034 + MPMX20_03374 0.13 +3.0 3,552,118 + MPMX20_03374 0.18 -0.5 3,552,173 + MPMX20_03374 0.21 -0.9 3,552,221 + MPMX20_03374 0.23 -0.7 3,552,252 - MPMX20_03374 0.25 +0.2 3,552,297 + MPMX20_03374 0.27 +0.8 3,552,305 - MPMX20_03374 0.28 -0.4 3,552,318 + MPMX20_03374 0.28 +0.9 3,552,320 - MPMX20_03374 0.28 +0.5 3,552,326 - MPMX20_03374 0.29 -1.5 3,552,368 + MPMX20_03374 0.31 -0.4 3,552,381 - MPMX20_03374 0.31 +1.1 3,552,468 - MPMX20_03374 0.36 +0.8 3,552,539 - MPMX20_03374 0.40 -0.9 3,552,610 - MPMX20_03374 0.43 +2.5 3,552,877 - MPMX20_03374 0.57 +3.5 3,552,886 - MPMX20_03374 0.58 -0.0 3,552,886 - MPMX20_03374 0.58 -0.1 3,553,002 - MPMX20_03374 0.64 -0.1 3,553,048 + MPMX20_03374 0.66 +0.9 3,553,070 + MPMX20_03374 0.67 -0.0 3,553,099 - MPMX20_03374 0.69 -0.4 3,553,100 + MPMX20_03374 0.69 +1.2 3,553,101 + MPMX20_03374 0.69 -1.7 3,553,113 + MPMX20_03374 0.69 -0.9 3,553,220 + MPMX20_03374 0.75 -0.7 3,553,291 + MPMX20_03374 0.79 +0.9 3,553,338 + MPMX20_03374 0.81 +1.3 3,553,357 - MPMX20_03374 0.82 +3.4 3,553,359 - MPMX20_03374 0.82 -1.7 3,553,432 + MPMX20_03374 0.86 -1.9 3,553,467 - MPMX20_03374 0.88 -0.7 3,553,487 + MPMX20_03374 0.89 -1.4 3,553,523 - +0.1 3,553,523 - -0.1 3,553,523 - +1.5 3,553,543 - +0.3 3,553,646 - -1.4 3,553,676 - -0.8 3,553,705 - -1.4 3,553,705 - -0.8 3,553,730 + -1.3 3,553,774 + -2.7 3,554,005 + MPMX20_03375 0.19 -0.8 3,554,018 + MPMX20_03375 0.20 +0.6 3,554,018 + MPMX20_03375 0.20 -0.2 3,554,026 - MPMX20_03375 0.21 +0.9 3,554,026 - MPMX20_03375 0.21 +1.5 3,554,026 - MPMX20_03375 0.21 -1.7 3,554,088 + MPMX20_03375 0.25 -1.6 3,554,115 - MPMX20_03375 0.27 +0.3 3,554,115 - MPMX20_03375 0.27 +0.3 3,554,115 - MPMX20_03375 0.27 +0.5 3,554,161 - MPMX20_03375 0.30 +0.2 3,554,164 - MPMX20_03375 0.30 -1.5 3,554,202 + MPMX20_03375 0.33 -0.8 3,554,207 + MPMX20_03375 0.33 -0.2 3,554,215 - MPMX20_03375 0.33 +0.6 3,554,217 + MPMX20_03375 0.34 +0.0 3,554,217 + MPMX20_03375 0.34 +0.2 3,554,225 - MPMX20_03375 0.34 +0.6 3,554,225 - MPMX20_03375 0.34 +0.0 3,554,235 - MPMX20_03375 0.35 -1.0 3,554,270 + MPMX20_03375 0.37 +1.5 3,554,270 + MPMX20_03375 0.37 +0.3 3,554,278 - MPMX20_03375 0.38 -1.9 3,554,329 + MPMX20_03375 0.41 -0.3 3,554,337 + MPMX20_03375 0.42 -0.0 3,554,345 - MPMX20_03375 0.42 -0.7 3,554,393 + MPMX20_03375 0.45 +0.2 3,554,500 + MPMX20_03375 0.52 -0.6 3,554,536 + MPMX20_03375 0.55 -0.8 3,554,544 - MPMX20_03375 0.55 +0.0 3,554,544 - MPMX20_03375 0.55 +0.2 3,554,572 + MPMX20_03375 0.57 -0.1 3,554,611 + MPMX20_03375 0.60 -0.2 3,554,646 - MPMX20_03375 0.62 -1.0
Or see this region's nucleotide sequence