Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01948

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01947 and MPMX20_01948 are separated by 14 nucleotidesMPMX20_01948 and MPMX20_01949 are separated by 97 nucleotides MPMX20_01947: MPMX20_01947 - Cysteine desulfurase, at 2,043,115 to 2,044,335 _01947 MPMX20_01948: MPMX20_01948 - Cysteine desulfuration protein SufE, at 2,044,350 to 2,044,766 _01948 MPMX20_01949: MPMX20_01949 - putative L,D-transpeptidase YnhG, at 2,044,864 to 2,045,877 _01949 Position (kb) 2044 2045Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 2043.381 kb on - strand, within MPMX20_01947at 2043.404 kb on + strand, within MPMX20_01947at 2043.405 kb on + strand, within MPMX20_01947at 2043.441 kb on + strand, within MPMX20_01947at 2043.453 kb on + strand, within MPMX20_01947at 2043.459 kb on - strand, within MPMX20_01947at 2043.708 kb on + strand, within MPMX20_01947at 2043.727 kb on + strand, within MPMX20_01947at 2043.727 kb on + strand, within MPMX20_01947at 2043.735 kb on - strand, within MPMX20_01947at 2043.742 kb on + strand, within MPMX20_01947at 2043.791 kb on + strand, within MPMX20_01947at 2043.809 kb on + strand, within MPMX20_01947at 2043.863 kb on - strand, within MPMX20_01947at 2044.026 kb on - strand, within MPMX20_01947at 2044.079 kb on + strand, within MPMX20_01947at 2044.106 kb on + strand, within MPMX20_01947at 2044.129 kb on - strand, within MPMX20_01947at 2044.145 kb on + strand, within MPMX20_01947at 2044.145 kb on + strand, within MPMX20_01947at 2044.186 kb on - strand, within MPMX20_01947at 2044.195 kb on + strand, within MPMX20_01947at 2044.200 kb on + strand, within MPMX20_01947at 2044.200 kb on + strand, within MPMX20_01947at 2044.200 kb on + strand, within MPMX20_01947at 2044.200 kb on + strand, within MPMX20_01947at 2044.205 kb on + strand, within MPMX20_01947at 2044.208 kb on - strand, within MPMX20_01947at 2044.208 kb on - strand, within MPMX20_01947at 2044.208 kb on - strand, within MPMX20_01947at 2044.208 kb on - strand, within MPMX20_01947at 2044.208 kb on - strand, within MPMX20_01947at 2044.208 kb on - strand, within MPMX20_01947at 2044.213 kb on - strand, within MPMX20_01947at 2044.274 kb on - strandat 2044.313 kb on - strandat 2044.387 kb on + strandat 2044.408 kb on + strand, within MPMX20_01948at 2044.429 kb on - strand, within MPMX20_01948at 2044.429 kb on - strand, within MPMX20_01948at 2044.440 kb on + strand, within MPMX20_01948at 2044.445 kb on + strand, within MPMX20_01948at 2044.445 kb on + strand, within MPMX20_01948at 2044.445 kb on + strand, within MPMX20_01948at 2044.445 kb on + strand, within MPMX20_01948at 2044.445 kb on + strand, within MPMX20_01948at 2044.445 kb on + strand, within MPMX20_01948at 2044.453 kb on - strand, within MPMX20_01948at 2044.453 kb on - strand, within MPMX20_01948at 2044.453 kb on - strand, within MPMX20_01948at 2044.453 kb on - strand, within MPMX20_01948at 2044.455 kb on + strand, within MPMX20_01948at 2044.463 kb on - strand, within MPMX20_01948at 2044.491 kb on + strand, within MPMX20_01948at 2044.501 kb on + strand, within MPMX20_01948at 2044.509 kb on - strand, within MPMX20_01948at 2044.509 kb on - strand, within MPMX20_01948at 2044.511 kb on + strand, within MPMX20_01948at 2044.519 kb on - strand, within MPMX20_01948at 2044.519 kb on - strand, within MPMX20_01948at 2044.535 kb on - strand, within MPMX20_01948at 2044.578 kb on + strand, within MPMX20_01948at 2044.588 kb on + strand, within MPMX20_01948at 2044.617 kb on + strand, within MPMX20_01948at 2044.617 kb on + strand, within MPMX20_01948at 2044.634 kb on + strand, within MPMX20_01948at 2044.634 kb on + strand, within MPMX20_01948at 2044.634 kb on + strand, within MPMX20_01948at 2044.642 kb on - strand, within MPMX20_01948at 2044.642 kb on - strand, within MPMX20_01948at 2044.645 kb on + strand, within MPMX20_01948at 2044.690 kb on + strand, within MPMX20_01948at 2044.692 kb on - strand, within MPMX20_01948at 2044.692 kb on - strand, within MPMX20_01948at 2044.716 kb on - strand, within MPMX20_01948at 2044.735 kb on - strandat 2044.750 kb on + strandat 2044.760 kb on + strandat 2044.810 kb on + strandat 2044.943 kb on - strandat 2044.994 kb on - strand, within MPMX20_01949at 2045.006 kb on - strand, within MPMX20_01949at 2045.014 kb on + strand, within MPMX20_01949at 2045.050 kb on - strand, within MPMX20_01949at 2045.050 kb on - strand, within MPMX20_01949at 2045.050 kb on - strand, within MPMX20_01949at 2045.050 kb on - strand, within MPMX20_01949at 2045.055 kb on - strand, within MPMX20_01949at 2045.090 kb on + strand, within MPMX20_01949at 2045.093 kb on - strand, within MPMX20_01949at 2045.093 kb on - strand, within MPMX20_01949at 2045.098 kb on - strand, within MPMX20_01949at 2045.098 kb on - strand, within MPMX20_01949at 2045.098 kb on - strand, within MPMX20_01949at 2045.098 kb on - strand, within MPMX20_01949at 2045.117 kb on - strand, within MPMX20_01949at 2045.152 kb on - strand, within MPMX20_01949at 2045.152 kb on - strand, within MPMX20_01949at 2045.161 kb on + strand, within MPMX20_01949at 2045.161 kb on + strand, within MPMX20_01949at 2045.169 kb on - strand, within MPMX20_01949at 2045.192 kb on - strand, within MPMX20_01949at 2045.270 kb on + strand, within MPMX20_01949at 2045.309 kb on + strand, within MPMX20_01949at 2045.309 kb on + strand, within MPMX20_01949at 2045.317 kb on - strand, within MPMX20_01949at 2045.317 kb on - strand, within MPMX20_01949at 2045.336 kb on + strand, within MPMX20_01949at 2045.336 kb on + strand, within MPMX20_01949at 2045.336 kb on + strand, within MPMX20_01949at 2045.367 kb on + strand, within MPMX20_01949at 2045.375 kb on - strand, within MPMX20_01949at 2045.465 kb on + strand, within MPMX20_01949at 2045.575 kb on + strand, within MPMX20_01949at 2045.645 kb on - strand, within MPMX20_01949at 2045.678 kb on + strand, within MPMX20_01949at 2045.714 kb on - strand, within MPMX20_01949at 2045.722 kb on - strand, within MPMX20_01949

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,043,381 - MPMX20_01947 0.22 -1.5
2,043,404 + MPMX20_01947 0.24 +0.3
2,043,405 + MPMX20_01947 0.24 -1.2
2,043,441 + MPMX20_01947 0.27 -0.4
2,043,453 + MPMX20_01947 0.28 -1.7
2,043,459 - MPMX20_01947 0.28 +0.1
2,043,708 + MPMX20_01947 0.49 -0.3
2,043,727 + MPMX20_01947 0.50 +1.8
2,043,727 + MPMX20_01947 0.50 -2.0
2,043,735 - MPMX20_01947 0.51 -0.8
2,043,742 + MPMX20_01947 0.51 -0.5
2,043,791 + MPMX20_01947 0.55 +0.2
2,043,809 + MPMX20_01947 0.57 -0.6
2,043,863 - MPMX20_01947 0.61 +1.4
2,044,026 - MPMX20_01947 0.75 -0.1
2,044,079 + MPMX20_01947 0.79 -0.9
2,044,106 + MPMX20_01947 0.81 -1.3
2,044,129 - MPMX20_01947 0.83 +0.4
2,044,145 + MPMX20_01947 0.84 -0.7
2,044,145 + MPMX20_01947 0.84 -1.2
2,044,186 - MPMX20_01947 0.88 -0.8
2,044,195 + MPMX20_01947 0.88 -1.4
2,044,200 + MPMX20_01947 0.89 -1.1
2,044,200 + MPMX20_01947 0.89 -0.2
2,044,200 + MPMX20_01947 0.89 +1.4
2,044,200 + MPMX20_01947 0.89 -0.6
2,044,205 + MPMX20_01947 0.89 +0.1
2,044,208 - MPMX20_01947 0.90 -1.4
2,044,208 - MPMX20_01947 0.90 -1.3
2,044,208 - MPMX20_01947 0.90 +0.4
2,044,208 - MPMX20_01947 0.90 -2.2
2,044,208 - MPMX20_01947 0.90 +0.2
2,044,208 - MPMX20_01947 0.90 +0.6
2,044,213 - MPMX20_01947 0.90 -1.7
2,044,274 - -0.2
2,044,313 - -0.7
2,044,387 + -1.5
2,044,408 + MPMX20_01948 0.14 +1.6
2,044,429 - MPMX20_01948 0.19 -0.3
2,044,429 - MPMX20_01948 0.19 +0.2
2,044,440 + MPMX20_01948 0.22 -0.5
2,044,445 + MPMX20_01948 0.23 -0.2
2,044,445 + MPMX20_01948 0.23 +1.2
2,044,445 + MPMX20_01948 0.23 -1.1
2,044,445 + MPMX20_01948 0.23 +5.8
2,044,445 + MPMX20_01948 0.23 -3.0
2,044,445 + MPMX20_01948 0.23 +0.3
2,044,453 - MPMX20_01948 0.25 -1.0
2,044,453 - MPMX20_01948 0.25 +1.7
2,044,453 - MPMX20_01948 0.25 -0.2
2,044,453 - MPMX20_01948 0.25 -0.1
2,044,455 + MPMX20_01948 0.25 -0.1
2,044,463 - MPMX20_01948 0.27 -1.8
2,044,491 + MPMX20_01948 0.34 -0.7
2,044,501 + MPMX20_01948 0.36 +0.6
2,044,509 - MPMX20_01948 0.38 +0.1
2,044,509 - MPMX20_01948 0.38 -0.2
2,044,511 + MPMX20_01948 0.39 +0.1
2,044,519 - MPMX20_01948 0.41 +1.0
2,044,519 - MPMX20_01948 0.41 -0.5
2,044,535 - MPMX20_01948 0.44 +0.1
2,044,578 + MPMX20_01948 0.55 -0.4
2,044,588 + MPMX20_01948 0.57 -0.7
2,044,617 + MPMX20_01948 0.64 -0.6
2,044,617 + MPMX20_01948 0.64 -1.3
2,044,634 + MPMX20_01948 0.68 +1.0
2,044,634 + MPMX20_01948 0.68 -0.4
2,044,634 + MPMX20_01948 0.68 -2.0
2,044,642 - MPMX20_01948 0.70 -2.0
2,044,642 - MPMX20_01948 0.70 +0.4
2,044,645 + MPMX20_01948 0.71 -1.8
2,044,690 + MPMX20_01948 0.82 -0.8
2,044,692 - MPMX20_01948 0.82 +0.1
2,044,692 - MPMX20_01948 0.82 -0.8
2,044,716 - MPMX20_01948 0.88 +0.7
2,044,735 - +0.0
2,044,750 + -1.1
2,044,760 + +1.1
2,044,810 + +1.4
2,044,943 - -0.3
2,044,994 - MPMX20_01949 0.13 -0.2
2,045,006 - MPMX20_01949 0.14 +0.1
2,045,014 + MPMX20_01949 0.15 -1.0
2,045,050 - MPMX20_01949 0.18 -0.2
2,045,050 - MPMX20_01949 0.18 +0.6
2,045,050 - MPMX20_01949 0.18 +0.9
2,045,050 - MPMX20_01949 0.18 +3.4
2,045,055 - MPMX20_01949 0.19 +0.6
2,045,090 + MPMX20_01949 0.22 -0.4
2,045,093 - MPMX20_01949 0.23 -0.1
2,045,093 - MPMX20_01949 0.23 +0.8
2,045,098 - MPMX20_01949 0.23 +0.3
2,045,098 - MPMX20_01949 0.23 -0.1
2,045,098 - MPMX20_01949 0.23 +0.6
2,045,098 - MPMX20_01949 0.23 -0.8
2,045,117 - MPMX20_01949 0.25 +0.8
2,045,152 - MPMX20_01949 0.28 -1.7
2,045,152 - MPMX20_01949 0.28 +0.8
2,045,161 + MPMX20_01949 0.29 -1.1
2,045,161 + MPMX20_01949 0.29 -0.1
2,045,169 - MPMX20_01949 0.30 -0.4
2,045,192 - MPMX20_01949 0.32 -0.8
2,045,270 + MPMX20_01949 0.40 -0.2
2,045,309 + MPMX20_01949 0.44 +1.0
2,045,309 + MPMX20_01949 0.44 -1.1
2,045,317 - MPMX20_01949 0.45 +1.0
2,045,317 - MPMX20_01949 0.45 -0.7
2,045,336 + MPMX20_01949 0.47 +0.4
2,045,336 + MPMX20_01949 0.47 -1.7
2,045,336 + MPMX20_01949 0.47 +0.3
2,045,367 + MPMX20_01949 0.50 -2.0
2,045,375 - MPMX20_01949 0.50 +1.6
2,045,465 + MPMX20_01949 0.59 +0.6
2,045,575 + MPMX20_01949 0.70 -0.3
2,045,645 - MPMX20_01949 0.77 +0.1
2,045,678 + MPMX20_01949 0.80 -1.8
2,045,714 - MPMX20_01949 0.84 -1.8
2,045,722 - MPMX20_01949 0.85 -0.6

Or see this region's nucleotide sequence