Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01947 and MPMX20_01948 are separated by 14 nucleotides MPMX20_01948 and MPMX20_01949 are separated by 97 nucleotides
MPMX20_01947: MPMX20_01947 - Cysteine desulfurase, at 2,043,115 to 2,044,335
_01947
MPMX20_01948: MPMX20_01948 - Cysteine desulfuration protein SufE, at 2,044,350 to 2,044,766
_01948
MPMX20_01949: MPMX20_01949 - putative L,D-transpeptidase YnhG, at 2,044,864 to 2,045,877
_01949
Position (kb)
2044
2045 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 2043.381 kb on - strand, within MPMX20_01947 at 2043.404 kb on + strand, within MPMX20_01947 at 2043.405 kb on + strand, within MPMX20_01947 at 2043.441 kb on + strand, within MPMX20_01947 at 2043.453 kb on + strand, within MPMX20_01947 at 2043.459 kb on - strand, within MPMX20_01947 at 2043.708 kb on + strand, within MPMX20_01947 at 2043.727 kb on + strand, within MPMX20_01947 at 2043.727 kb on + strand, within MPMX20_01947 at 2043.735 kb on - strand, within MPMX20_01947 at 2043.742 kb on + strand, within MPMX20_01947 at 2043.791 kb on + strand, within MPMX20_01947 at 2043.809 kb on + strand, within MPMX20_01947 at 2043.863 kb on - strand, within MPMX20_01947 at 2044.026 kb on - strand, within MPMX20_01947 at 2044.079 kb on + strand, within MPMX20_01947 at 2044.106 kb on + strand, within MPMX20_01947 at 2044.129 kb on - strand, within MPMX20_01947 at 2044.145 kb on + strand, within MPMX20_01947 at 2044.145 kb on + strand, within MPMX20_01947 at 2044.186 kb on - strand, within MPMX20_01947 at 2044.195 kb on + strand, within MPMX20_01947 at 2044.200 kb on + strand, within MPMX20_01947 at 2044.200 kb on + strand, within MPMX20_01947 at 2044.200 kb on + strand, within MPMX20_01947 at 2044.200 kb on + strand, within MPMX20_01947 at 2044.205 kb on + strand, within MPMX20_01947 at 2044.208 kb on - strand, within MPMX20_01947 at 2044.208 kb on - strand, within MPMX20_01947 at 2044.208 kb on - strand, within MPMX20_01947 at 2044.208 kb on - strand, within MPMX20_01947 at 2044.208 kb on - strand, within MPMX20_01947 at 2044.208 kb on - strand, within MPMX20_01947 at 2044.213 kb on - strand, within MPMX20_01947 at 2044.274 kb on - strand at 2044.313 kb on - strand at 2044.387 kb on + strand at 2044.408 kb on + strand, within MPMX20_01948 at 2044.429 kb on - strand, within MPMX20_01948 at 2044.429 kb on - strand, within MPMX20_01948 at 2044.440 kb on + strand, within MPMX20_01948 at 2044.445 kb on + strand, within MPMX20_01948 at 2044.445 kb on + strand, within MPMX20_01948 at 2044.445 kb on + strand, within MPMX20_01948 at 2044.445 kb on + strand, within MPMX20_01948 at 2044.445 kb on + strand, within MPMX20_01948 at 2044.445 kb on + strand, within MPMX20_01948 at 2044.453 kb on - strand, within MPMX20_01948 at 2044.453 kb on - strand, within MPMX20_01948 at 2044.453 kb on - strand, within MPMX20_01948 at 2044.453 kb on - strand, within MPMX20_01948 at 2044.455 kb on + strand, within MPMX20_01948 at 2044.463 kb on - strand, within MPMX20_01948 at 2044.491 kb on + strand, within MPMX20_01948 at 2044.501 kb on + strand, within MPMX20_01948 at 2044.509 kb on - strand, within MPMX20_01948 at 2044.509 kb on - strand, within MPMX20_01948 at 2044.511 kb on + strand, within MPMX20_01948 at 2044.519 kb on - strand, within MPMX20_01948 at 2044.519 kb on - strand, within MPMX20_01948 at 2044.535 kb on - strand, within MPMX20_01948 at 2044.578 kb on + strand, within MPMX20_01948 at 2044.588 kb on + strand, within MPMX20_01948 at 2044.617 kb on + strand, within MPMX20_01948 at 2044.617 kb on + strand, within MPMX20_01948 at 2044.634 kb on + strand, within MPMX20_01948 at 2044.634 kb on + strand, within MPMX20_01948 at 2044.634 kb on + strand, within MPMX20_01948 at 2044.642 kb on - strand, within MPMX20_01948 at 2044.642 kb on - strand, within MPMX20_01948 at 2044.645 kb on + strand, within MPMX20_01948 at 2044.690 kb on + strand, within MPMX20_01948 at 2044.692 kb on - strand, within MPMX20_01948 at 2044.692 kb on - strand, within MPMX20_01948 at 2044.716 kb on - strand, within MPMX20_01948 at 2044.735 kb on - strand at 2044.750 kb on + strand at 2044.760 kb on + strand at 2044.810 kb on + strand at 2044.943 kb on - strand at 2044.994 kb on - strand, within MPMX20_01949 at 2045.006 kb on - strand, within MPMX20_01949 at 2045.014 kb on + strand, within MPMX20_01949 at 2045.050 kb on - strand, within MPMX20_01949 at 2045.050 kb on - strand, within MPMX20_01949 at 2045.050 kb on - strand, within MPMX20_01949 at 2045.050 kb on - strand, within MPMX20_01949 at 2045.055 kb on - strand, within MPMX20_01949 at 2045.090 kb on + strand, within MPMX20_01949 at 2045.093 kb on - strand, within MPMX20_01949 at 2045.093 kb on - strand, within MPMX20_01949 at 2045.098 kb on - strand, within MPMX20_01949 at 2045.098 kb on - strand, within MPMX20_01949 at 2045.098 kb on - strand, within MPMX20_01949 at 2045.098 kb on - strand, within MPMX20_01949 at 2045.117 kb on - strand, within MPMX20_01949 at 2045.152 kb on - strand, within MPMX20_01949 at 2045.152 kb on - strand, within MPMX20_01949 at 2045.161 kb on + strand, within MPMX20_01949 at 2045.161 kb on + strand, within MPMX20_01949 at 2045.169 kb on - strand, within MPMX20_01949 at 2045.192 kb on - strand, within MPMX20_01949 at 2045.270 kb on + strand, within MPMX20_01949 at 2045.309 kb on + strand, within MPMX20_01949 at 2045.309 kb on + strand, within MPMX20_01949 at 2045.317 kb on - strand, within MPMX20_01949 at 2045.317 kb on - strand, within MPMX20_01949 at 2045.336 kb on + strand, within MPMX20_01949 at 2045.336 kb on + strand, within MPMX20_01949 at 2045.336 kb on + strand, within MPMX20_01949 at 2045.367 kb on + strand, within MPMX20_01949 at 2045.375 kb on - strand, within MPMX20_01949 at 2045.465 kb on + strand, within MPMX20_01949 at 2045.575 kb on + strand, within MPMX20_01949 at 2045.645 kb on - strand, within MPMX20_01949 at 2045.678 kb on + strand, within MPMX20_01949 at 2045.714 kb on - strand, within MPMX20_01949 at 2045.722 kb on - strand, within MPMX20_01949
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,043,381 - MPMX20_01947 0.22 -1.5 2,043,404 + MPMX20_01947 0.24 +0.3 2,043,405 + MPMX20_01947 0.24 -1.2 2,043,441 + MPMX20_01947 0.27 -0.4 2,043,453 + MPMX20_01947 0.28 -1.7 2,043,459 - MPMX20_01947 0.28 +0.1 2,043,708 + MPMX20_01947 0.49 -0.3 2,043,727 + MPMX20_01947 0.50 +1.8 2,043,727 + MPMX20_01947 0.50 -2.0 2,043,735 - MPMX20_01947 0.51 -0.8 2,043,742 + MPMX20_01947 0.51 -0.5 2,043,791 + MPMX20_01947 0.55 +0.2 2,043,809 + MPMX20_01947 0.57 -0.6 2,043,863 - MPMX20_01947 0.61 +1.4 2,044,026 - MPMX20_01947 0.75 -0.1 2,044,079 + MPMX20_01947 0.79 -0.9 2,044,106 + MPMX20_01947 0.81 -1.3 2,044,129 - MPMX20_01947 0.83 +0.4 2,044,145 + MPMX20_01947 0.84 -0.7 2,044,145 + MPMX20_01947 0.84 -1.2 2,044,186 - MPMX20_01947 0.88 -0.8 2,044,195 + MPMX20_01947 0.88 -1.4 2,044,200 + MPMX20_01947 0.89 -1.1 2,044,200 + MPMX20_01947 0.89 -0.2 2,044,200 + MPMX20_01947 0.89 +1.4 2,044,200 + MPMX20_01947 0.89 -0.6 2,044,205 + MPMX20_01947 0.89 +0.1 2,044,208 - MPMX20_01947 0.90 -1.4 2,044,208 - MPMX20_01947 0.90 -1.3 2,044,208 - MPMX20_01947 0.90 +0.4 2,044,208 - MPMX20_01947 0.90 -2.2 2,044,208 - MPMX20_01947 0.90 +0.2 2,044,208 - MPMX20_01947 0.90 +0.6 2,044,213 - MPMX20_01947 0.90 -1.7 2,044,274 - -0.2 2,044,313 - -0.7 2,044,387 + -1.5 2,044,408 + MPMX20_01948 0.14 +1.6 2,044,429 - MPMX20_01948 0.19 -0.3 2,044,429 - MPMX20_01948 0.19 +0.2 2,044,440 + MPMX20_01948 0.22 -0.5 2,044,445 + MPMX20_01948 0.23 -0.2 2,044,445 + MPMX20_01948 0.23 +1.2 2,044,445 + MPMX20_01948 0.23 -1.1 2,044,445 + MPMX20_01948 0.23 +5.8 2,044,445 + MPMX20_01948 0.23 -3.0 2,044,445 + MPMX20_01948 0.23 +0.3 2,044,453 - MPMX20_01948 0.25 -1.0 2,044,453 - MPMX20_01948 0.25 +1.7 2,044,453 - MPMX20_01948 0.25 -0.2 2,044,453 - MPMX20_01948 0.25 -0.1 2,044,455 + MPMX20_01948 0.25 -0.1 2,044,463 - MPMX20_01948 0.27 -1.8 2,044,491 + MPMX20_01948 0.34 -0.7 2,044,501 + MPMX20_01948 0.36 +0.6 2,044,509 - MPMX20_01948 0.38 +0.1 2,044,509 - MPMX20_01948 0.38 -0.2 2,044,511 + MPMX20_01948 0.39 +0.1 2,044,519 - MPMX20_01948 0.41 +1.0 2,044,519 - MPMX20_01948 0.41 -0.5 2,044,535 - MPMX20_01948 0.44 +0.1 2,044,578 + MPMX20_01948 0.55 -0.4 2,044,588 + MPMX20_01948 0.57 -0.7 2,044,617 + MPMX20_01948 0.64 -0.6 2,044,617 + MPMX20_01948 0.64 -1.3 2,044,634 + MPMX20_01948 0.68 +1.0 2,044,634 + MPMX20_01948 0.68 -0.4 2,044,634 + MPMX20_01948 0.68 -2.0 2,044,642 - MPMX20_01948 0.70 -2.0 2,044,642 - MPMX20_01948 0.70 +0.4 2,044,645 + MPMX20_01948 0.71 -1.8 2,044,690 + MPMX20_01948 0.82 -0.8 2,044,692 - MPMX20_01948 0.82 +0.1 2,044,692 - MPMX20_01948 0.82 -0.8 2,044,716 - MPMX20_01948 0.88 +0.7 2,044,735 - +0.0 2,044,750 + -1.1 2,044,760 + +1.1 2,044,810 + +1.4 2,044,943 - -0.3 2,044,994 - MPMX20_01949 0.13 -0.2 2,045,006 - MPMX20_01949 0.14 +0.1 2,045,014 + MPMX20_01949 0.15 -1.0 2,045,050 - MPMX20_01949 0.18 -0.2 2,045,050 - MPMX20_01949 0.18 +0.6 2,045,050 - MPMX20_01949 0.18 +0.9 2,045,050 - MPMX20_01949 0.18 +3.4 2,045,055 - MPMX20_01949 0.19 +0.6 2,045,090 + MPMX20_01949 0.22 -0.4 2,045,093 - MPMX20_01949 0.23 -0.1 2,045,093 - MPMX20_01949 0.23 +0.8 2,045,098 - MPMX20_01949 0.23 +0.3 2,045,098 - MPMX20_01949 0.23 -0.1 2,045,098 - MPMX20_01949 0.23 +0.6 2,045,098 - MPMX20_01949 0.23 -0.8 2,045,117 - MPMX20_01949 0.25 +0.8 2,045,152 - MPMX20_01949 0.28 -1.7 2,045,152 - MPMX20_01949 0.28 +0.8 2,045,161 + MPMX20_01949 0.29 -1.1 2,045,161 + MPMX20_01949 0.29 -0.1 2,045,169 - MPMX20_01949 0.30 -0.4 2,045,192 - MPMX20_01949 0.32 -0.8 2,045,270 + MPMX20_01949 0.40 -0.2 2,045,309 + MPMX20_01949 0.44 +1.0 2,045,309 + MPMX20_01949 0.44 -1.1 2,045,317 - MPMX20_01949 0.45 +1.0 2,045,317 - MPMX20_01949 0.45 -0.7 2,045,336 + MPMX20_01949 0.47 +0.4 2,045,336 + MPMX20_01949 0.47 -1.7 2,045,336 + MPMX20_01949 0.47 +0.3 2,045,367 + MPMX20_01949 0.50 -2.0 2,045,375 - MPMX20_01949 0.50 +1.6 2,045,465 + MPMX20_01949 0.59 +0.6 2,045,575 + MPMX20_01949 0.70 -0.3 2,045,645 - MPMX20_01949 0.77 +0.1 2,045,678 + MPMX20_01949 0.80 -1.8 2,045,714 - MPMX20_01949 0.84 -1.8 2,045,722 - MPMX20_01949 0.85 -0.6
Or see this region's nucleotide sequence