Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01833

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01830 and MPMX20_01831 are separated by 80 nucleotidesMPMX20_01831 and MPMX20_01832 are separated by 0 nucleotidesMPMX20_01832 and MPMX20_01833 are separated by 151 nucleotidesMPMX20_01833 and MPMX20_01834 are separated by 30 nucleotides MPMX20_01830: MPMX20_01830 - hypothetical protein, at 1,926,135 to 1,926,389 _01830 MPMX20_01831: MPMX20_01831 - hypothetical protein, at 1,926,470 to 1,926,775 _01831 MPMX20_01832: MPMX20_01832 - hypothetical protein, at 1,926,776 to 1,927,120 _01832 MPMX20_01833: MPMX20_01833 - CTP synthase, at 1,927,272 to 1,927,979 _01833 MPMX20_01834: MPMX20_01834 - 2-nitroimidazole transporter, at 1,928,010 to 1,929,197 _01834 Position (kb) 1927 1928Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1926.278 kb on + strand, within MPMX20_01830at 1926.312 kb on + strand, within MPMX20_01830at 1926.320 kb on - strand, within MPMX20_01830at 1926.320 kb on - strand, within MPMX20_01830at 1926.406 kb on + strandat 1926.406 kb on + strandat 1926.473 kb on - strandat 1926.487 kb on + strandat 1926.557 kb on - strand, within MPMX20_01831at 1926.568 kb on + strand, within MPMX20_01831at 1926.576 kb on - strand, within MPMX20_01831at 1926.576 kb on - strand, within MPMX20_01831at 1926.576 kb on - strand, within MPMX20_01831at 1926.629 kb on + strand, within MPMX20_01831at 1926.659 kb on + strand, within MPMX20_01831at 1926.667 kb on - strand, within MPMX20_01831at 1926.758 kb on - strandat 1926.798 kb on + strandat 1926.803 kb on + strandat 1926.806 kb on - strandat 1926.806 kb on - strandat 1926.811 kb on - strand, within MPMX20_01832at 1926.847 kb on + strand, within MPMX20_01832at 1926.847 kb on + strand, within MPMX20_01832at 1926.847 kb on + strand, within MPMX20_01832at 1926.848 kb on + strand, within MPMX20_01832at 1926.855 kb on - strand, within MPMX20_01832at 1926.855 kb on - strand, within MPMX20_01832at 1926.855 kb on - strand, within MPMX20_01832at 1926.855 kb on - strand, within MPMX20_01832at 1926.855 kb on - strand, within MPMX20_01832at 1926.855 kb on - strand, within MPMX20_01832at 1926.856 kb on - strand, within MPMX20_01832at 1926.894 kb on + strand, within MPMX20_01832at 1926.894 kb on + strand, within MPMX20_01832at 1926.902 kb on - strand, within MPMX20_01832at 1926.902 kb on - strand, within MPMX20_01832at 1926.988 kb on + strand, within MPMX20_01832at 1927.074 kb on - strand, within MPMX20_01832at 1927.083 kb on + strand, within MPMX20_01832at 1927.104 kb on + strandat 1927.104 kb on + strandat 1927.112 kb on - strandat 1927.112 kb on - strandat 1927.171 kb on + strandat 1927.194 kb on - strandat 1927.213 kb on + strandat 1927.220 kb on + strandat 1927.230 kb on + strandat 1927.263 kb on - strandat 1927.280 kb on + strandat 1927.327 kb on + strandat 1927.391 kb on - strand, within MPMX20_01833at 1927.401 kb on + strand, within MPMX20_01833at 1927.401 kb on + strand, within MPMX20_01833at 1927.425 kb on + strand, within MPMX20_01833at 1927.433 kb on - strand, within MPMX20_01833at 1927.435 kb on + strand, within MPMX20_01833at 1927.530 kb on + strand, within MPMX20_01833at 1927.538 kb on - strand, within MPMX20_01833at 1927.583 kb on + strand, within MPMX20_01833at 1927.583 kb on + strand, within MPMX20_01833at 1927.602 kb on - strand, within MPMX20_01833at 1927.615 kb on - strand, within MPMX20_01833at 1927.648 kb on + strand, within MPMX20_01833at 1927.656 kb on - strand, within MPMX20_01833at 1927.673 kb on - strand, within MPMX20_01833at 1927.673 kb on - strand, within MPMX20_01833at 1927.673 kb on - strand, within MPMX20_01833at 1927.707 kb on - strand, within MPMX20_01833at 1927.733 kb on + strand, within MPMX20_01833at 1927.736 kb on - strand, within MPMX20_01833at 1927.736 kb on - strand, within MPMX20_01833at 1927.803 kb on + strand, within MPMX20_01833at 1927.803 kb on + strand, within MPMX20_01833at 1927.811 kb on - strand, within MPMX20_01833at 1927.813 kb on - strand, within MPMX20_01833at 1927.905 kb on - strand, within MPMX20_01833at 1927.907 kb on + strand, within MPMX20_01833at 1927.959 kb on - strandat 1928.025 kb on - strandat 1928.073 kb on + strandat 1928.085 kb on + strandat 1928.085 kb on + strandat 1928.152 kb on - strand, within MPMX20_01834at 1928.225 kb on + strand, within MPMX20_01834at 1928.240 kb on + strand, within MPMX20_01834at 1928.240 kb on + strand, within MPMX20_01834at 1928.248 kb on - strand, within MPMX20_01834at 1928.248 kb on - strand, within MPMX20_01834at 1928.248 kb on - strand, within MPMX20_01834at 1928.252 kb on + strand, within MPMX20_01834at 1928.260 kb on - strand, within MPMX20_01834at 1928.313 kb on + strand, within MPMX20_01834at 1928.345 kb on + strand, within MPMX20_01834at 1928.422 kb on + strand, within MPMX20_01834at 1928.454 kb on + strand, within MPMX20_01834at 1928.457 kb on - strand, within MPMX20_01834at 1928.471 kb on + strand, within MPMX20_01834at 1928.471 kb on + strand, within MPMX20_01834at 1928.605 kb on - strand, within MPMX20_01834at 1928.639 kb on + strand, within MPMX20_01834at 1928.652 kb on - strand, within MPMX20_01834at 1928.657 kb on - strand, within MPMX20_01834at 1928.720 kb on - strand, within MPMX20_01834at 1928.742 kb on + strand, within MPMX20_01834at 1928.742 kb on + strand, within MPMX20_01834at 1928.742 kb on + strand, within MPMX20_01834at 1928.750 kb on - strand, within MPMX20_01834at 1928.830 kb on + strand, within MPMX20_01834at 1928.839 kb on + strand, within MPMX20_01834at 1928.849 kb on + strand, within MPMX20_01834at 1928.857 kb on - strand, within MPMX20_01834at 1928.870 kb on + strand, within MPMX20_01834at 1928.878 kb on - strand, within MPMX20_01834at 1928.896 kb on + strand, within MPMX20_01834at 1928.923 kb on - strand, within MPMX20_01834at 1928.952 kb on - strand, within MPMX20_01834

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,926,278 + MPMX20_01830 0.56 -1.6
1,926,312 + MPMX20_01830 0.69 +0.1
1,926,320 - MPMX20_01830 0.73 -0.8
1,926,320 - MPMX20_01830 0.73 +1.6
1,926,406 + -0.3
1,926,406 + -0.8
1,926,473 - -0.1
1,926,487 + +1.2
1,926,557 - MPMX20_01831 0.28 -0.5
1,926,568 + MPMX20_01831 0.32 -1.6
1,926,576 - MPMX20_01831 0.35 +0.3
1,926,576 - MPMX20_01831 0.35 -1.2
1,926,576 - MPMX20_01831 0.35 -1.5
1,926,629 + MPMX20_01831 0.52 -1.0
1,926,659 + MPMX20_01831 0.62 -0.7
1,926,667 - MPMX20_01831 0.64 +0.7
1,926,758 - -0.2
1,926,798 + -0.4
1,926,803 + +0.3
1,926,806 - +0.2
1,926,806 - -0.5
1,926,811 - MPMX20_01832 0.10 +0.2
1,926,847 + MPMX20_01832 0.21 +0.3
1,926,847 + MPMX20_01832 0.21 -2.6
1,926,847 + MPMX20_01832 0.21 +1.8
1,926,848 + MPMX20_01832 0.21 +0.0
1,926,855 - MPMX20_01832 0.23 -0.9
1,926,855 - MPMX20_01832 0.23 +0.9
1,926,855 - MPMX20_01832 0.23 +0.2
1,926,855 - MPMX20_01832 0.23 -0.1
1,926,855 - MPMX20_01832 0.23 -0.2
1,926,855 - MPMX20_01832 0.23 -2.6
1,926,856 - MPMX20_01832 0.23 -2.5
1,926,894 + MPMX20_01832 0.34 +0.5
1,926,894 + MPMX20_01832 0.34 +1.3
1,926,902 - MPMX20_01832 0.37 +0.8
1,926,902 - MPMX20_01832 0.37 -0.7
1,926,988 + MPMX20_01832 0.61 -0.6
1,927,074 - MPMX20_01832 0.86 -1.6
1,927,083 + MPMX20_01832 0.89 +2.3
1,927,104 + +0.2
1,927,104 + +0.8
1,927,112 - +0.3
1,927,112 - +0.0
1,927,171 + +0.0
1,927,194 - -1.7
1,927,213 + +0.6
1,927,220 + +1.0
1,927,230 + -1.0
1,927,263 - +0.8
1,927,280 + +0.0
1,927,327 + +0.2
1,927,391 - MPMX20_01833 0.17 -0.8
1,927,401 + MPMX20_01833 0.18 +0.5
1,927,401 + MPMX20_01833 0.18 -0.2
1,927,425 + MPMX20_01833 0.22 +0.5
1,927,433 - MPMX20_01833 0.23 +0.8
1,927,435 + MPMX20_01833 0.23 +4.4
1,927,530 + MPMX20_01833 0.36 +1.3
1,927,538 - MPMX20_01833 0.38 -1.2
1,927,583 + MPMX20_01833 0.44 -2.2
1,927,583 + MPMX20_01833 0.44 +0.5
1,927,602 - MPMX20_01833 0.47 +0.4
1,927,615 - MPMX20_01833 0.48 -1.7
1,927,648 + MPMX20_01833 0.53 +0.6
1,927,656 - MPMX20_01833 0.54 -1.0
1,927,673 - MPMX20_01833 0.57 -2.2
1,927,673 - MPMX20_01833 0.57 +0.2
1,927,673 - MPMX20_01833 0.57 -0.7
1,927,707 - MPMX20_01833 0.61 -0.2
1,927,733 + MPMX20_01833 0.65 +1.1
1,927,736 - MPMX20_01833 0.66 -1.2
1,927,736 - MPMX20_01833 0.66 -0.1
1,927,803 + MPMX20_01833 0.75 -0.8
1,927,803 + MPMX20_01833 0.75 -0.5
1,927,811 - MPMX20_01833 0.76 +0.3
1,927,813 - MPMX20_01833 0.76 -0.5
1,927,905 - MPMX20_01833 0.89 -0.7
1,927,907 + MPMX20_01833 0.90 -3.1
1,927,959 - +0.3
1,928,025 - -1.2
1,928,073 + -1.0
1,928,085 + -0.7
1,928,085 + +0.7
1,928,152 - MPMX20_01834 0.12 +0.0
1,928,225 + MPMX20_01834 0.18 +2.1
1,928,240 + MPMX20_01834 0.19 -0.9
1,928,240 + MPMX20_01834 0.19 -1.1
1,928,248 - MPMX20_01834 0.20 -1.6
1,928,248 - MPMX20_01834 0.20 +0.5
1,928,248 - MPMX20_01834 0.20 -0.5
1,928,252 + MPMX20_01834 0.20 -0.2
1,928,260 - MPMX20_01834 0.21 -0.9
1,928,313 + MPMX20_01834 0.26 -2.4
1,928,345 + MPMX20_01834 0.28 -0.1
1,928,422 + MPMX20_01834 0.35 +1.6
1,928,454 + MPMX20_01834 0.37 -0.4
1,928,457 - MPMX20_01834 0.38 +0.5
1,928,471 + MPMX20_01834 0.39 -0.2
1,928,471 + MPMX20_01834 0.39 +0.3
1,928,605 - MPMX20_01834 0.50 +0.5
1,928,639 + MPMX20_01834 0.53 -1.6
1,928,652 - MPMX20_01834 0.54 +0.5
1,928,657 - MPMX20_01834 0.54 +3.1
1,928,720 - MPMX20_01834 0.60 -1.9
1,928,742 + MPMX20_01834 0.62 +1.8
1,928,742 + MPMX20_01834 0.62 -1.1
1,928,742 + MPMX20_01834 0.62 +0.3
1,928,750 - MPMX20_01834 0.62 -0.3
1,928,830 + MPMX20_01834 0.69 -0.9
1,928,839 + MPMX20_01834 0.70 -2.1
1,928,849 + MPMX20_01834 0.71 -0.5
1,928,857 - MPMX20_01834 0.71 -1.5
1,928,870 + MPMX20_01834 0.72 -1.5
1,928,878 - MPMX20_01834 0.73 -0.5
1,928,896 + MPMX20_01834 0.75 +0.1
1,928,923 - MPMX20_01834 0.77 -0.1
1,928,952 - MPMX20_01834 0.79 -0.4

Or see this region's nucleotide sequence