Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00922 and MPMX20_00923 are separated by 260 nucleotides MPMX20_00923 and MPMX20_00924 are separated by 105 nucleotides
MPMX20_00922: MPMX20_00922 - Cytosol non-specific dipeptidase, at 970,362 to 971,819
_00922
MPMX20_00923: MPMX20_00923 - Xanthine phosphoribosyltransferase, at 972,080 to 972,538
_00923
MPMX20_00924: MPMX20_00924 - hypothetical protein, at 972,644 to 973,888
_00924
Position (kb) 972
973 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 971.145 kb on + strand, within MPMX20_00922 at 971.145 kb on + strand, within MPMX20_00922 at 971.145 kb on + strand, within MPMX20_00922 at 971.145 kb on + strand, within MPMX20_00922 at 971.153 kb on - strand, within MPMX20_00922 at 971.153 kb on - strand, within MPMX20_00922 at 971.153 kb on - strand, within MPMX20_00922 at 971.153 kb on - strand, within MPMX20_00922 at 971.153 kb on - strand, within MPMX20_00922 at 971.167 kb on + strand, within MPMX20_00922 at 971.175 kb on - strand, within MPMX20_00922 at 971.212 kb on - strand, within MPMX20_00922 at 971.222 kb on - strand, within MPMX20_00922 at 971.293 kb on + strand, within MPMX20_00922 at 971.370 kb on + strand, within MPMX20_00922 at 971.378 kb on - strand, within MPMX20_00922 at 971.423 kb on - strand, within MPMX20_00922 at 971.433 kb on - strand, within MPMX20_00922 at 971.453 kb on - strand, within MPMX20_00922 at 971.457 kb on + strand, within MPMX20_00922 at 971.486 kb on + strand, within MPMX20_00922 at 971.487 kb on - strand, within MPMX20_00922 at 971.529 kb on - strand, within MPMX20_00922 at 971.545 kb on - strand, within MPMX20_00922 at 971.558 kb on - strand, within MPMX20_00922 at 971.558 kb on - strand, within MPMX20_00922 at 971.586 kb on + strand, within MPMX20_00922 at 971.586 kb on + strand, within MPMX20_00922 at 971.594 kb on - strand, within MPMX20_00922 at 971.612 kb on + strand, within MPMX20_00922 at 971.714 kb on - strand at 971.810 kb on + strand at 971.810 kb on + strand at 971.817 kb on - strand at 971.874 kb on - strand at 971.875 kb on + strand at 971.875 kb on + strand at 971.875 kb on + strand at 971.875 kb on + strand at 971.876 kb on - strand at 971.883 kb on - strand at 971.883 kb on - strand at 971.883 kb on - strand at 971.883 kb on - strand at 971.883 kb on - strand at 971.887 kb on + strand at 971.887 kb on + strand at 971.898 kb on - strand at 971.915 kb on - strand at 971.970 kb on - strand at 972.064 kb on + strand at 972.064 kb on + strand at 972.072 kb on - strand at 972.072 kb on - strand at 972.074 kb on + strand at 972.074 kb on + strand at 972.074 kb on + strand at 972.080 kb on - strand at 972.109 kb on - strand at 972.110 kb on - strand at 972.143 kb on + strand, within MPMX20_00923 at 972.153 kb on + strand, within MPMX20_00923 at 972.153 kb on + strand, within MPMX20_00923 at 972.207 kb on - strand, within MPMX20_00923 at 972.281 kb on - strand, within MPMX20_00923 at 972.314 kb on - strand, within MPMX20_00923 at 972.319 kb on - strand, within MPMX20_00923 at 972.326 kb on + strand, within MPMX20_00923 at 972.328 kb on - strand, within MPMX20_00923 at 972.334 kb on - strand, within MPMX20_00923 at 972.346 kb on + strand, within MPMX20_00923 at 972.403 kb on + strand, within MPMX20_00923 at 972.485 kb on - strand, within MPMX20_00923 at 972.488 kb on - strand, within MPMX20_00923 at 972.490 kb on + strand, within MPMX20_00923 at 972.496 kb on + strand at 972.498 kb on - strand at 972.498 kb on - strand at 972.498 kb on - strand at 972.564 kb on + strand at 972.574 kb on - strand at 972.576 kb on - strand at 972.615 kb on + strand at 972.629 kb on + strand at 972.629 kb on + strand at 972.637 kb on - strand at 972.637 kb on - strand at 972.639 kb on + strand at 972.661 kb on + strand at 972.720 kb on + strand at 972.729 kb on - strand at 972.741 kb on - strand at 972.755 kb on + strand at 972.755 kb on + strand at 972.763 kb on - strand at 972.763 kb on - strand at 972.763 kb on - strand at 972.822 kb on + strand, within MPMX20_00924 at 972.822 kb on + strand, within MPMX20_00924 at 972.822 kb on + strand, within MPMX20_00924 at 972.822 kb on + strand, within MPMX20_00924 at 972.822 kb on + strand, within MPMX20_00924 at 972.822 kb on + strand, within MPMX20_00924 at 972.830 kb on - strand, within MPMX20_00924 at 972.830 kb on - strand, within MPMX20_00924 at 972.830 kb on - strand, within MPMX20_00924 at 972.830 kb on - strand, within MPMX20_00924 at 972.830 kb on - strand, within MPMX20_00924 at 972.830 kb on - strand, within MPMX20_00924 at 972.830 kb on - strand, within MPMX20_00924 at 972.876 kb on - strand, within MPMX20_00924 at 972.888 kb on + strand, within MPMX20_00924 at 972.896 kb on + strand, within MPMX20_00924 at 972.945 kb on + strand, within MPMX20_00924 at 972.945 kb on + strand, within MPMX20_00924 at 973.033 kb on + strand, within MPMX20_00924 at 973.041 kb on - strand, within MPMX20_00924 at 973.095 kb on - strand, within MPMX20_00924 at 973.095 kb on - strand, within MPMX20_00924 at 973.110 kb on + strand, within MPMX20_00924 at 973.124 kb on + strand, within MPMX20_00924 at 973.132 kb on - strand, within MPMX20_00924 at 973.160 kb on - strand, within MPMX20_00924 at 973.232 kb on + strand, within MPMX20_00924 at 973.240 kb on - strand, within MPMX20_00924 at 973.282 kb on + strand, within MPMX20_00924 at 973.296 kb on - strand, within MPMX20_00924 at 973.372 kb on + strand, within MPMX20_00924 at 973.425 kb on + strand, within MPMX20_00924 at 973.533 kb on + strand, within MPMX20_00924
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 971,145 + MPMX20_00922 0.54 -2.8 971,145 + MPMX20_00922 0.54 -0.2 971,145 + MPMX20_00922 0.54 +0.1 971,145 + MPMX20_00922 0.54 -1.6 971,153 - MPMX20_00922 0.54 +0.5 971,153 - MPMX20_00922 0.54 -0.6 971,153 - MPMX20_00922 0.54 +1.6 971,153 - MPMX20_00922 0.54 -0.9 971,153 - MPMX20_00922 0.54 -0.8 971,167 + MPMX20_00922 0.55 -0.5 971,175 - MPMX20_00922 0.56 -0.8 971,212 - MPMX20_00922 0.58 +1.3 971,222 - MPMX20_00922 0.59 -0.8 971,293 + MPMX20_00922 0.64 +0.5 971,370 + MPMX20_00922 0.69 -0.2 971,378 - MPMX20_00922 0.70 -0.0 971,423 - MPMX20_00922 0.73 -1.2 971,433 - MPMX20_00922 0.73 -1.7 971,453 - MPMX20_00922 0.75 +0.5 971,457 + MPMX20_00922 0.75 -1.1 971,486 + MPMX20_00922 0.77 -0.7 971,487 - MPMX20_00922 0.77 +0.0 971,529 - MPMX20_00922 0.80 -1.1 971,545 - MPMX20_00922 0.81 -1.1 971,558 - MPMX20_00922 0.82 -1.7 971,558 - MPMX20_00922 0.82 -1.3 971,586 + MPMX20_00922 0.84 +0.0 971,586 + MPMX20_00922 0.84 +0.9 971,594 - MPMX20_00922 0.84 -1.9 971,612 + MPMX20_00922 0.86 -0.0 971,714 - +0.5 971,810 + -1.0 971,810 + -0.9 971,817 - -1.5 971,874 - -0.9 971,875 + -0.2 971,875 + -2.2 971,875 + +0.0 971,875 + -2.2 971,876 - -1.0 971,883 - -0.2 971,883 - -1.6 971,883 - +0.1 971,883 - -1.3 971,883 - -0.2 971,887 + +2.5 971,887 + -0.4 971,898 - -0.7 971,915 - -0.9 971,970 - +1.0 972,064 + -0.2 972,064 + -1.2 972,072 - -0.2 972,072 - -0.3 972,074 + -0.8 972,074 + +1.5 972,074 + -0.5 972,080 - -0.4 972,109 - +0.2 972,110 - +1.1 972,143 + MPMX20_00923 0.14 +7.4 972,153 + MPMX20_00923 0.16 -0.1 972,153 + MPMX20_00923 0.16 -2.0 972,207 - MPMX20_00923 0.28 -0.5 972,281 - MPMX20_00923 0.44 +1.1 972,314 - MPMX20_00923 0.51 +1.5 972,319 - MPMX20_00923 0.52 -1.7 972,326 + MPMX20_00923 0.54 -2.2 972,328 - MPMX20_00923 0.54 +1.3 972,334 - MPMX20_00923 0.55 -1.2 972,346 + MPMX20_00923 0.58 -0.5 972,403 + MPMX20_00923 0.70 +1.0 972,485 - MPMX20_00923 0.88 -0.4 972,488 - MPMX20_00923 0.89 -0.8 972,490 + MPMX20_00923 0.89 +1.5 972,496 + -0.7 972,498 - -1.7 972,498 - +1.5 972,498 - +1.1 972,564 + -1.2 972,574 - +2.5 972,576 - -1.1 972,615 + -1.7 972,629 + -0.0 972,629 + -0.2 972,637 - +1.1 972,637 - +0.5 972,639 + +0.1 972,661 + -1.3 972,720 + -0.7 972,729 - -0.8 972,741 - +0.5 972,755 + -0.9 972,755 + -2.3 972,763 - -1.2 972,763 - +0.5 972,763 - +0.4 972,822 + MPMX20_00924 0.14 -0.6 972,822 + MPMX20_00924 0.14 +0.0 972,822 + MPMX20_00924 0.14 +0.0 972,822 + MPMX20_00924 0.14 -0.0 972,822 + MPMX20_00924 0.14 +0.1 972,822 + MPMX20_00924 0.14 -0.9 972,830 - MPMX20_00924 0.15 +0.5 972,830 - MPMX20_00924 0.15 +1.6 972,830 - MPMX20_00924 0.15 +0.0 972,830 - MPMX20_00924 0.15 -0.5 972,830 - MPMX20_00924 0.15 -0.6 972,830 - MPMX20_00924 0.15 -1.9 972,830 - MPMX20_00924 0.15 +0.7 972,876 - MPMX20_00924 0.19 -1.1 972,888 + MPMX20_00924 0.20 -1.1 972,896 + MPMX20_00924 0.20 -0.7 972,945 + MPMX20_00924 0.24 +1.7 972,945 + MPMX20_00924 0.24 -1.1 973,033 + MPMX20_00924 0.31 -0.0 973,041 - MPMX20_00924 0.32 +0.1 973,095 - MPMX20_00924 0.36 -1.0 973,095 - MPMX20_00924 0.36 -1.0 973,110 + MPMX20_00924 0.37 +0.3 973,124 + MPMX20_00924 0.39 -0.9 973,132 - MPMX20_00924 0.39 -1.2 973,160 - MPMX20_00924 0.41 -1.1 973,232 + MPMX20_00924 0.47 -0.9 973,240 - MPMX20_00924 0.48 -0.4 973,282 + MPMX20_00924 0.51 +1.7 973,296 - MPMX20_00924 0.52 +0.3 973,372 + MPMX20_00924 0.58 -2.2 973,425 + MPMX20_00924 0.63 +0.9 973,533 + MPMX20_00924 0.71 +1.0
Or see this region's nucleotide sequence