Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03416

Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03415 and MPMX20_03416 overlap by 10 nucleotidesMPMX20_03416 and MPMX20_03417 are separated by 125 nucleotides MPMX20_03415: MPMX20_03415 - hypothetical protein, at 3,599,883 to 3,600,863 _03415 MPMX20_03416: MPMX20_03416 - hypothetical protein, at 3,600,854 to 3,601,492 _03416 MPMX20_03417: MPMX20_03417 - hypothetical protein, at 3,601,618 to 3,602,895 _03417 Position (kb) 3600 3601 3602Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 3599.889 kb on - strandat 3599.891 kb on + strandat 3600.049 kb on + strand, within MPMX20_03415at 3600.109 kb on + strand, within MPMX20_03415at 3600.136 kb on + strand, within MPMX20_03415at 3600.144 kb on - strand, within MPMX20_03415at 3600.192 kb on - strand, within MPMX20_03415at 3600.237 kb on + strand, within MPMX20_03415at 3600.321 kb on - strand, within MPMX20_03415at 3600.405 kb on + strand, within MPMX20_03415at 3600.408 kb on - strand, within MPMX20_03415at 3600.480 kb on - strand, within MPMX20_03415at 3600.593 kb on + strand, within MPMX20_03415at 3600.601 kb on - strand, within MPMX20_03415at 3600.601 kb on - strand, within MPMX20_03415at 3600.641 kb on + strand, within MPMX20_03415at 3600.704 kb on - strand, within MPMX20_03415at 3600.815 kb on + strandat 3600.889 kb on + strandat 3600.940 kb on + strand, within MPMX20_03416at 3600.967 kb on + strand, within MPMX20_03416at 3600.975 kb on - strand, within MPMX20_03416at 3600.975 kb on - strand, within MPMX20_03416at 3601.019 kb on + strand, within MPMX20_03416at 3601.026 kb on + strand, within MPMX20_03416at 3601.033 kb on + strand, within MPMX20_03416at 3601.033 kb on + strand, within MPMX20_03416at 3601.033 kb on + strand, within MPMX20_03416at 3601.036 kb on - strand, within MPMX20_03416at 3601.041 kb on - strand, within MPMX20_03416at 3601.041 kb on - strand, within MPMX20_03416at 3601.046 kb on - strand, within MPMX20_03416at 3601.088 kb on + strand, within MPMX20_03416at 3601.088 kb on + strand, within MPMX20_03416at 3601.091 kb on - strand, within MPMX20_03416at 3601.133 kb on + strand, within MPMX20_03416at 3601.133 kb on + strand, within MPMX20_03416at 3601.133 kb on + strand, within MPMX20_03416at 3601.141 kb on - strand, within MPMX20_03416at 3601.141 kb on - strand, within MPMX20_03416at 3601.142 kb on + strand, within MPMX20_03416at 3601.301 kb on + strand, within MPMX20_03416at 3601.384 kb on + strand, within MPMX20_03416at 3601.426 kb on - strand, within MPMX20_03416at 3601.450 kb on - strandat 3601.475 kb on + strandat 3601.477 kb on + strandat 3601.483 kb on - strandat 3601.615 kb on - strandat 3601.617 kb on + strandat 3601.625 kb on - strandat 3601.727 kb on - strandat 3601.748 kb on + strand, within MPMX20_03417at 3601.751 kb on + strand, within MPMX20_03417at 3601.766 kb on + strand, within MPMX20_03417at 3601.841 kb on + strand, within MPMX20_03417at 3601.855 kb on + strand, within MPMX20_03417at 3601.858 kb on - strand, within MPMX20_03417at 3601.876 kb on - strand, within MPMX20_03417at 3601.890 kb on + strand, within MPMX20_03417at 3601.890 kb on + strand, within MPMX20_03417at 3601.896 kb on + strand, within MPMX20_03417at 3601.898 kb on - strand, within MPMX20_03417at 3601.906 kb on - strand, within MPMX20_03417at 3601.930 kb on + strand, within MPMX20_03417at 3601.940 kb on - strand, within MPMX20_03417at 3601.940 kb on - strand, within MPMX20_03417at 3601.968 kb on + strand, within MPMX20_03417at 3601.981 kb on + strand, within MPMX20_03417at 3602.011 kb on + strand, within MPMX20_03417at 3602.088 kb on + strand, within MPMX20_03417at 3602.096 kb on - strand, within MPMX20_03417at 3602.140 kb on - strand, within MPMX20_03417at 3602.142 kb on + strand, within MPMX20_03417at 3602.142 kb on + strand, within MPMX20_03417at 3602.150 kb on - strand, within MPMX20_03417at 3602.256 kb on + strand, within MPMX20_03417at 3602.259 kb on + strand, within MPMX20_03417at 3602.259 kb on + strand, within MPMX20_03417at 3602.271 kb on + strand, within MPMX20_03417at 3602.271 kb on + strand, within MPMX20_03417at 3602.284 kb on - strand, within MPMX20_03417at 3602.284 kb on - strand, within MPMX20_03417at 3602.285 kb on - strand, within MPMX20_03417at 3602.315 kb on - strand, within MPMX20_03417at 3602.332 kb on - strand, within MPMX20_03417at 3602.378 kb on + strand, within MPMX20_03417at 3602.378 kb on - strand, within MPMX20_03417at 3602.433 kb on - strand, within MPMX20_03417at 3602.477 kb on + strand, within MPMX20_03417

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,599,889 - +0.5
3,599,891 + -0.0
3,600,049 + MPMX20_03415 0.17 +1.9
3,600,109 + MPMX20_03415 0.23 +1.5
3,600,136 + MPMX20_03415 0.26 -0.5
3,600,144 - MPMX20_03415 0.27 -0.2
3,600,192 - MPMX20_03415 0.31 -0.1
3,600,237 + MPMX20_03415 0.36 +1.6
3,600,321 - MPMX20_03415 0.45 +0.1
3,600,405 + MPMX20_03415 0.53 -2.2
3,600,408 - MPMX20_03415 0.54 -0.5
3,600,480 - MPMX20_03415 0.61 -0.2
3,600,593 + MPMX20_03415 0.72 -0.1
3,600,601 - MPMX20_03415 0.73 -0.3
3,600,601 - MPMX20_03415 0.73 +0.4
3,600,641 + MPMX20_03415 0.77 -0.3
3,600,704 - MPMX20_03415 0.84 +1.1
3,600,815 + -1.0
3,600,889 + +0.8
3,600,940 + MPMX20_03416 0.13 +0.6
3,600,967 + MPMX20_03416 0.18 -0.0
3,600,975 - MPMX20_03416 0.19 +1.3
3,600,975 - MPMX20_03416 0.19 +0.3
3,601,019 + MPMX20_03416 0.26 -0.0
3,601,026 + MPMX20_03416 0.27 -0.0
3,601,033 + MPMX20_03416 0.28 +1.1
3,601,033 + MPMX20_03416 0.28 +0.3
3,601,033 + MPMX20_03416 0.28 +2.1
3,601,036 - MPMX20_03416 0.28 +6.1
3,601,041 - MPMX20_03416 0.29 -0.9
3,601,041 - MPMX20_03416 0.29 -1.4
3,601,046 - MPMX20_03416 0.30 -1.3
3,601,088 + MPMX20_03416 0.37 -0.5
3,601,088 + MPMX20_03416 0.37 -1.9
3,601,091 - MPMX20_03416 0.37 -0.0
3,601,133 + MPMX20_03416 0.44 -0.3
3,601,133 + MPMX20_03416 0.44 -0.5
3,601,133 + MPMX20_03416 0.44 +1.6
3,601,141 - MPMX20_03416 0.45 -0.4
3,601,141 - MPMX20_03416 0.45 -1.4
3,601,142 + MPMX20_03416 0.45 -0.2
3,601,301 + MPMX20_03416 0.70 +0.3
3,601,384 + MPMX20_03416 0.83 +0.6
3,601,426 - MPMX20_03416 0.90 -0.8
3,601,450 - -0.2
3,601,475 + -0.7
3,601,477 + +0.9
3,601,483 - -0.5
3,601,615 - +0.4
3,601,617 + +1.3
3,601,625 - -0.1
3,601,727 - +1.1
3,601,748 + MPMX20_03417 0.10 +1.1
3,601,751 + MPMX20_03417 0.10 +1.7
3,601,766 + MPMX20_03417 0.12 +0.3
3,601,841 + MPMX20_03417 0.17 +0.5
3,601,855 + MPMX20_03417 0.19 -1.5
3,601,858 - MPMX20_03417 0.19 -0.0
3,601,876 - MPMX20_03417 0.20 +0.7
3,601,890 + MPMX20_03417 0.21 +1.7
3,601,890 + MPMX20_03417 0.21 -0.0
3,601,896 + MPMX20_03417 0.22 -0.4
3,601,898 - MPMX20_03417 0.22 +1.7
3,601,906 - MPMX20_03417 0.23 -0.6
3,601,930 + MPMX20_03417 0.24 +0.1
3,601,940 - MPMX20_03417 0.25 +0.7
3,601,940 - MPMX20_03417 0.25 +0.6
3,601,968 + MPMX20_03417 0.27 -0.4
3,601,981 + MPMX20_03417 0.28 +1.2
3,602,011 + MPMX20_03417 0.31 +0.3
3,602,088 + MPMX20_03417 0.37 +0.2
3,602,096 - MPMX20_03417 0.37 -0.9
3,602,140 - MPMX20_03417 0.41 +0.3
3,602,142 + MPMX20_03417 0.41 +0.4
3,602,142 + MPMX20_03417 0.41 -0.5
3,602,150 - MPMX20_03417 0.42 -0.2
3,602,256 + MPMX20_03417 0.50 +2.9
3,602,259 + MPMX20_03417 0.50 +0.1
3,602,259 + MPMX20_03417 0.50 +0.7
3,602,271 + MPMX20_03417 0.51 +0.3
3,602,271 + MPMX20_03417 0.51 +0.1
3,602,284 - MPMX20_03417 0.52 -0.2
3,602,284 - MPMX20_03417 0.52 +1.6
3,602,285 - MPMX20_03417 0.52 +0.1
3,602,315 - MPMX20_03417 0.55 +0.5
3,602,332 - MPMX20_03417 0.56 -0.8
3,602,378 + MPMX20_03417 0.59 -1.6
3,602,378 - MPMX20_03417 0.59 +0.2
3,602,433 - MPMX20_03417 0.64 -0.0
3,602,477 + MPMX20_03417 0.67 -0.6

Or see this region's nucleotide sequence