Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03243

Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03241 and MPMX20_03242 are separated by 8 nucleotidesMPMX20_03242 and MPMX20_03243 overlap by 4 nucleotidesMPMX20_03243 and MPMX20_03244 are separated by 88 nucleotides MPMX20_03241: MPMX20_03241 - Histidine transport ATP-binding protein HisP, at 3,411,738 to 3,412,511 _03241 MPMX20_03242: MPMX20_03242 - Histidine transport system permease protein HisM, at 3,412,520 to 3,413,236 _03242 MPMX20_03243: MPMX20_03243 - Histidine transport system permease protein HisQ, at 3,413,233 to 3,413,919 _03243 MPMX20_03244: MPMX20_03244 - Histidine-binding periplasmic protein, at 3,414,008 to 3,414,790 _03244 Position (kb) 3413 3414Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 3412.270 kb on + strand, within MPMX20_03241at 3412.355 kb on + strand, within MPMX20_03241at 3412.355 kb on + strand, within MPMX20_03241at 3412.355 kb on + strand, within MPMX20_03241at 3412.363 kb on - strand, within MPMX20_03241at 3412.363 kb on - strand, within MPMX20_03241at 3412.363 kb on - strand, within MPMX20_03241at 3412.363 kb on - strand, within MPMX20_03241at 3412.363 kb on - strand, within MPMX20_03241at 3412.363 kb on - strand, within MPMX20_03241at 3412.363 kb on - strand, within MPMX20_03241at 3412.370 kb on + strand, within MPMX20_03241at 3412.385 kb on - strand, within MPMX20_03241at 3412.387 kb on - strand, within MPMX20_03241at 3412.481 kb on + strandat 3412.490 kb on + strandat 3412.556 kb on + strandat 3412.591 kb on - strandat 3412.591 kb on - strandat 3412.650 kb on - strand, within MPMX20_03242at 3412.693 kb on - strand, within MPMX20_03242at 3412.706 kb on + strand, within MPMX20_03242at 3412.709 kb on - strand, within MPMX20_03242at 3412.714 kb on - strand, within MPMX20_03242at 3412.714 kb on - strand, within MPMX20_03242at 3412.724 kb on - strand, within MPMX20_03242at 3412.802 kb on - strand, within MPMX20_03242at 3412.855 kb on - strand, within MPMX20_03242at 3412.918 kb on + strand, within MPMX20_03242at 3412.918 kb on + strand, within MPMX20_03242at 3412.928 kb on + strand, within MPMX20_03242at 3412.928 kb on + strand, within MPMX20_03242at 3412.928 kb on + strand, within MPMX20_03242at 3412.928 kb on + strand, within MPMX20_03242at 3412.931 kb on - strand, within MPMX20_03242at 3412.936 kb on - strand, within MPMX20_03242at 3412.936 kb on - strand, within MPMX20_03242at 3412.936 kb on - strand, within MPMX20_03242at 3413.001 kb on - strand, within MPMX20_03242at 3413.001 kb on - strand, within MPMX20_03242at 3413.042 kb on + strand, within MPMX20_03242at 3413.193 kb on + strandat 3413.193 kb on + strandat 3413.196 kb on - strandat 3413.244 kb on - strandat 3413.248 kb on + strandat 3413.248 kb on + strandat 3413.248 kb on + strandat 3413.248 kb on + strandat 3413.251 kb on - strandat 3413.256 kb on - strandat 3413.278 kb on - strandat 3413.337 kb on + strand, within MPMX20_03243at 3413.345 kb on - strand, within MPMX20_03243at 3413.352 kb on + strand, within MPMX20_03243at 3413.352 kb on + strand, within MPMX20_03243at 3413.397 kb on + strand, within MPMX20_03243at 3413.457 kb on - strand, within MPMX20_03243at 3413.477 kb on - strand, within MPMX20_03243at 3413.511 kb on + strand, within MPMX20_03243at 3413.511 kb on + strand, within MPMX20_03243at 3413.519 kb on - strand, within MPMX20_03243at 3413.567 kb on + strand, within MPMX20_03243at 3413.575 kb on - strand, within MPMX20_03243at 3413.633 kb on - strand, within MPMX20_03243at 3413.697 kb on - strand, within MPMX20_03243at 3413.702 kb on - strand, within MPMX20_03243at 3413.798 kb on + strand, within MPMX20_03243at 3413.798 kb on + strand, within MPMX20_03243at 3413.829 kb on - strand, within MPMX20_03243at 3413.854 kb on + strandat 3413.865 kb on + strandat 3413.865 kb on + strandat 3413.865 kb on + strandat 3413.924 kb on - strandat 3413.955 kb on - strandat 3414.092 kb on + strand, within MPMX20_03244at 3414.105 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.219 kb on - strand, within MPMX20_03244at 3414.245 kb on - strand, within MPMX20_03244at 3414.278 kb on - strand, within MPMX20_03244at 3414.356 kb on + strand, within MPMX20_03244at 3414.368 kb on + strand, within MPMX20_03244at 3414.412 kb on - strand, within MPMX20_03244at 3414.429 kb on + strand, within MPMX20_03244at 3414.440 kb on + strand, within MPMX20_03244at 3414.448 kb on - strand, within MPMX20_03244at 3414.585 kb on + strand, within MPMX20_03244at 3414.619 kb on - strand, within MPMX20_03244at 3414.631 kb on - strand, within MPMX20_03244at 3414.687 kb on - strand, within MPMX20_03244at 3414.691 kb on + strand, within MPMX20_03244at 3414.699 kb on - strand, within MPMX20_03244at 3414.699 kb on - strand, within MPMX20_03244at 3414.832 kb on + strandat 3414.842 kb on + strandat 3414.842 kb on + strandat 3414.850 kb on - strandat 3414.862 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,412,270 + MPMX20_03241 0.69 +0.4
3,412,355 + MPMX20_03241 0.80 -0.6
3,412,355 + MPMX20_03241 0.80 -0.2
3,412,355 + MPMX20_03241 0.80 -0.7
3,412,363 - MPMX20_03241 0.81 -2.6
3,412,363 - MPMX20_03241 0.81 -1.3
3,412,363 - MPMX20_03241 0.81 +7.0
3,412,363 - MPMX20_03241 0.81 -2.9
3,412,363 - MPMX20_03241 0.81 +0.1
3,412,363 - MPMX20_03241 0.81 -0.8
3,412,363 - MPMX20_03241 0.81 -1.0
3,412,370 + MPMX20_03241 0.82 -1.1
3,412,385 - MPMX20_03241 0.84 -1.3
3,412,387 - MPMX20_03241 0.84 -0.8
3,412,481 + +0.0
3,412,490 + +0.0
3,412,556 + -1.5
3,412,591 - -0.3
3,412,591 - -1.4
3,412,650 - MPMX20_03242 0.18 -0.9
3,412,693 - MPMX20_03242 0.24 -0.1
3,412,706 + MPMX20_03242 0.26 -0.7
3,412,709 - MPMX20_03242 0.26 -1.0
3,412,714 - MPMX20_03242 0.27 -0.5
3,412,714 - MPMX20_03242 0.27 -0.2
3,412,724 - MPMX20_03242 0.28 +1.4
3,412,802 - MPMX20_03242 0.39 -0.2
3,412,855 - MPMX20_03242 0.47 -1.2
3,412,918 + MPMX20_03242 0.56 -0.0
3,412,918 + MPMX20_03242 0.56 -0.2
3,412,928 + MPMX20_03242 0.57 -2.1
3,412,928 + MPMX20_03242 0.57 -0.5
3,412,928 + MPMX20_03242 0.57 -0.2
3,412,928 + MPMX20_03242 0.57 -0.6
3,412,931 - MPMX20_03242 0.57 +0.1
3,412,936 - MPMX20_03242 0.58 -0.7
3,412,936 - MPMX20_03242 0.58 -0.9
3,412,936 - MPMX20_03242 0.58 -0.5
3,413,001 - MPMX20_03242 0.67 -3.2
3,413,001 - MPMX20_03242 0.67 -0.2
3,413,042 + MPMX20_03242 0.73 -1.4
3,413,193 + -2.0
3,413,193 + +1.2
3,413,196 - +0.4
3,413,244 - +0.2
3,413,248 + +0.4
3,413,248 + -1.8
3,413,248 + -1.2
3,413,248 + -1.0
3,413,251 - -1.5
3,413,256 - -0.7
3,413,278 - +0.4
3,413,337 + MPMX20_03243 0.15 -2.8
3,413,345 - MPMX20_03243 0.16 -1.1
3,413,352 + MPMX20_03243 0.17 -0.7
3,413,352 + MPMX20_03243 0.17 -1.2
3,413,397 + MPMX20_03243 0.24 +0.4
3,413,457 - MPMX20_03243 0.33 +0.0
3,413,477 - MPMX20_03243 0.36 +0.8
3,413,511 + MPMX20_03243 0.40 -1.2
3,413,511 + MPMX20_03243 0.40 -0.3
3,413,519 - MPMX20_03243 0.42 +0.3
3,413,567 + MPMX20_03243 0.49 +0.2
3,413,575 - MPMX20_03243 0.50 -1.5
3,413,633 - MPMX20_03243 0.58 -1.0
3,413,697 - MPMX20_03243 0.68 -0.7
3,413,702 - MPMX20_03243 0.68 +2.4
3,413,798 + MPMX20_03243 0.82 +0.4
3,413,798 + MPMX20_03243 0.82 -0.0
3,413,829 - MPMX20_03243 0.87 -0.7
3,413,854 + -0.5
3,413,865 + -2.4
3,413,865 + +0.4
3,413,865 + -1.6
3,413,924 - -0.6
3,413,955 - -0.8
3,414,092 + MPMX20_03244 0.11 +0.6
3,414,105 - MPMX20_03244 0.12 +2.4
3,414,138 - MPMX20_03244 0.17 -0.9
3,414,138 - MPMX20_03244 0.17 -0.4
3,414,138 - MPMX20_03244 0.17 -0.6
3,414,138 - MPMX20_03244 0.17 -0.8
3,414,219 - MPMX20_03244 0.27 -1.4
3,414,245 - MPMX20_03244 0.30 -2.8
3,414,278 - MPMX20_03244 0.34 +0.7
3,414,356 + MPMX20_03244 0.44 -1.6
3,414,368 + MPMX20_03244 0.46 +0.4
3,414,412 - MPMX20_03244 0.52 -1.0
3,414,429 + MPMX20_03244 0.54 +1.4
3,414,440 + MPMX20_03244 0.55 -0.2
3,414,448 - MPMX20_03244 0.56 -1.9
3,414,585 + MPMX20_03244 0.74 -2.2
3,414,619 - MPMX20_03244 0.78 +0.0
3,414,631 - MPMX20_03244 0.80 -1.2
3,414,687 - MPMX20_03244 0.87 -3.0
3,414,691 + MPMX20_03244 0.87 +0.2
3,414,699 - MPMX20_03244 0.88 -1.5
3,414,699 - MPMX20_03244 0.88 -1.5
3,414,832 + -0.5
3,414,842 + -1.0
3,414,842 + -2.0
3,414,850 - -0.5
3,414,862 - +0.5

Or see this region's nucleotide sequence