Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02933

Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02929 and MPMX20_02930 are separated by 2 nucleotidesMPMX20_02930 and MPMX20_02931 are separated by 135 nucleotidesMPMX20_02931 and MPMX20_02932 are separated by 59 nucleotidesMPMX20_02932 and MPMX20_02933 are separated by 45 nucleotidesMPMX20_02933 and MPMX20_02934 are separated by 26 nucleotidesMPMX20_02934 and MPMX20_02935 are separated by 228 nucleotides MPMX20_02929: MPMX20_02929 - hypothetical protein, at 3,061,994 to 3,062,086 _02929 MPMX20_02930: MPMX20_02930 - hypothetical protein, at 3,062,089 to 3,062,307 _02930 MPMX20_02931: MPMX20_02931 - hypothetical protein, at 3,062,443 to 3,062,724 _02931 MPMX20_02932: MPMX20_02932 - hypothetical protein, at 3,062,784 to 3,063,029 _02932 MPMX20_02933: MPMX20_02933 - Putative defective protein IntQ, at 3,063,075 to 3,064,370 _02933 MPMX20_02934: MPMX20_02934 - Flagellar hook-basal body complex protein FliE, at 3,064,397 to 3,064,708 _02934 MPMX20_02935: MPMX20_02935 - Flagellar M-ring protein, at 3,064,937 to 3,066,616 _02935 Position (kb) 3063 3064 3065Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3062.079 kb on - strandat 3062.080 kb on + strandat 3062.114 kb on - strand, within MPMX20_02930at 3062.126 kb on - strand, within MPMX20_02930at 3062.128 kb on + strand, within MPMX20_02930at 3062.138 kb on + strand, within MPMX20_02930at 3062.138 kb on + strand, within MPMX20_02930at 3062.138 kb on + strand, within MPMX20_02930at 3062.141 kb on - strand, within MPMX20_02930at 3062.141 kb on - strand, within MPMX20_02930at 3062.141 kb on - strand, within MPMX20_02930at 3062.179 kb on - strand, within MPMX20_02930at 3062.182 kb on + strand, within MPMX20_02930at 3062.183 kb on - strand, within MPMX20_02930at 3062.190 kb on - strand, within MPMX20_02930at 3062.191 kb on + strand, within MPMX20_02930at 3062.211 kb on + strand, within MPMX20_02930at 3062.233 kb on + strand, within MPMX20_02930at 3062.253 kb on - strand, within MPMX20_02930at 3062.385 kb on + strandat 3062.404 kb on - strandat 3062.425 kb on + strandat 3062.485 kb on + strand, within MPMX20_02931at 3062.502 kb on + strand, within MPMX20_02931at 3062.510 kb on + strand, within MPMX20_02931at 3062.510 kb on + strand, within MPMX20_02931at 3062.510 kb on + strand, within MPMX20_02931at 3062.517 kb on + strand, within MPMX20_02931at 3062.518 kb on - strand, within MPMX20_02931at 3062.518 kb on - strand, within MPMX20_02931at 3062.518 kb on - strand, within MPMX20_02931at 3062.518 kb on - strand, within MPMX20_02931at 3062.519 kb on + strand, within MPMX20_02931at 3062.525 kb on - strand, within MPMX20_02931at 3062.527 kb on - strand, within MPMX20_02931at 3062.529 kb on + strand, within MPMX20_02931at 3062.529 kb on + strand, within MPMX20_02931at 3062.529 kb on + strand, within MPMX20_02931at 3062.529 kb on + strand, within MPMX20_02931at 3062.537 kb on - strand, within MPMX20_02931at 3062.539 kb on + strand, within MPMX20_02931at 3062.543 kb on + strand, within MPMX20_02931at 3062.565 kb on + strand, within MPMX20_02931at 3062.579 kb on + strand, within MPMX20_02931at 3062.745 kb on + strandat 3062.745 kb on + strandat 3062.753 kb on - strandat 3062.753 kb on - strandat 3062.758 kb on - strandat 3062.772 kb on - strandat 3062.781 kb on + strandat 3062.859 kb on - strand, within MPMX20_02932at 3062.859 kb on - strand, within MPMX20_02932at 3062.866 kb on + strand, within MPMX20_02932at 3062.871 kb on - strand, within MPMX20_02932at 3062.973 kb on + strand, within MPMX20_02932at 3062.988 kb on + strand, within MPMX20_02932at 3062.988 kb on + strand, within MPMX20_02932at 3062.988 kb on + strand, within MPMX20_02932at 3062.995 kb on - strand, within MPMX20_02932at 3062.996 kb on - strand, within MPMX20_02932at 3062.996 kb on - strand, within MPMX20_02932at 3062.996 kb on - strand, within MPMX20_02932at 3062.996 kb on - strand, within MPMX20_02932at 3063.205 kb on + strand, within MPMX20_02933at 3063.213 kb on - strand, within MPMX20_02933at 3063.213 kb on - strand, within MPMX20_02933at 3063.222 kb on + strand, within MPMX20_02933at 3063.294 kb on + strand, within MPMX20_02933at 3063.295 kb on + strand, within MPMX20_02933at 3063.295 kb on + strand, within MPMX20_02933at 3063.296 kb on - strand, within MPMX20_02933at 3063.344 kb on - strand, within MPMX20_02933at 3063.384 kb on + strand, within MPMX20_02933at 3063.387 kb on - strand, within MPMX20_02933at 3063.394 kb on - strand, within MPMX20_02933at 3063.420 kb on - strand, within MPMX20_02933at 3063.465 kb on + strand, within MPMX20_02933at 3063.534 kb on + strand, within MPMX20_02933at 3063.542 kb on - strand, within MPMX20_02933at 3063.542 kb on - strand, within MPMX20_02933at 3063.542 kb on - strand, within MPMX20_02933at 3063.558 kb on + strand, within MPMX20_02933at 3063.622 kb on + strand, within MPMX20_02933at 3063.659 kb on - strand, within MPMX20_02933at 3063.673 kb on - strand, within MPMX20_02933at 3063.673 kb on - strand, within MPMX20_02933at 3063.673 kb on - strand, within MPMX20_02933at 3063.693 kb on - strand, within MPMX20_02933at 3063.753 kb on + strand, within MPMX20_02933at 3063.766 kb on - strand, within MPMX20_02933at 3063.793 kb on - strand, within MPMX20_02933at 3063.805 kb on + strand, within MPMX20_02933at 3063.892 kb on - strand, within MPMX20_02933at 3063.892 kb on - strand, within MPMX20_02933at 3063.919 kb on - strand, within MPMX20_02933at 3063.979 kb on - strand, within MPMX20_02933at 3063.979 kb on - strand, within MPMX20_02933at 3063.990 kb on - strand, within MPMX20_02933at 3064.041 kb on + strand, within MPMX20_02933at 3064.064 kb on - strand, within MPMX20_02933at 3064.076 kb on + strand, within MPMX20_02933at 3064.084 kb on - strand, within MPMX20_02933at 3064.093 kb on + strand, within MPMX20_02933at 3064.101 kb on - strand, within MPMX20_02933at 3064.103 kb on + strand, within MPMX20_02933at 3064.147 kb on + strand, within MPMX20_02933at 3064.155 kb on - strand, within MPMX20_02933at 3064.203 kb on - strand, within MPMX20_02933at 3064.240 kb on + strand, within MPMX20_02933at 3064.240 kb on + strand, within MPMX20_02933at 3064.248 kb on - strandat 3064.337 kb on - strandat 3064.395 kb on + strandat 3064.403 kb on - strandat 3064.403 kb on - strandat 3064.428 kb on + strandat 3064.458 kb on - strand, within MPMX20_02934at 3064.555 kb on + strand, within MPMX20_02934at 3064.598 kb on + strand, within MPMX20_02934at 3064.601 kb on - strand, within MPMX20_02934at 3064.601 kb on - strand, within MPMX20_02934at 3064.606 kb on - strand, within MPMX20_02934at 3064.640 kb on - strand, within MPMX20_02934at 3064.673 kb on - strand, within MPMX20_02934at 3064.687 kb on + strandat 3064.687 kb on + strandat 3064.689 kb on + strandat 3064.697 kb on - strandat 3064.699 kb on + strandat 3064.712 kb on - strandat 3064.715 kb on + strandat 3064.744 kb on - strandat 3064.927 kb on - strandat 3064.930 kb on - strandat 3064.939 kb on + strandat 3064.941 kb on + strandat 3064.941 kb on + strandat 3064.949 kb on - strandat 3064.998 kb on - strandat 3065.079 kb on + strandat 3065.103 kb on - strandat 3065.108 kb on - strand, within MPMX20_02935at 3065.119 kb on + strand, within MPMX20_02935at 3065.119 kb on + strand, within MPMX20_02935at 3065.127 kb on - strand, within MPMX20_02935at 3065.141 kb on - strand, within MPMX20_02935at 3065.142 kb on + strand, within MPMX20_02935at 3065.259 kb on - strand, within MPMX20_02935at 3065.314 kb on - strand, within MPMX20_02935at 3065.329 kb on + strand, within MPMX20_02935at 3065.337 kb on - strand, within MPMX20_02935

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,062,079 - -0.4
3,062,080 + -1.8
3,062,114 - MPMX20_02930 0.11 -0.4
3,062,126 - MPMX20_02930 0.17 -1.1
3,062,128 + MPMX20_02930 0.18 -2.2
3,062,138 + MPMX20_02930 0.22 -1.8
3,062,138 + MPMX20_02930 0.22 -2.4
3,062,138 + MPMX20_02930 0.22 -0.2
3,062,141 - MPMX20_02930 0.24 -1.9
3,062,141 - MPMX20_02930 0.24 -0.9
3,062,141 - MPMX20_02930 0.24 -1.5
3,062,179 - MPMX20_02930 0.41 -1.7
3,062,182 + MPMX20_02930 0.42 -2.6
3,062,183 - MPMX20_02930 0.43 -0.9
3,062,190 - MPMX20_02930 0.46 +0.8
3,062,191 + MPMX20_02930 0.47 -1.3
3,062,211 + MPMX20_02930 0.56 -0.8
3,062,233 + MPMX20_02930 0.66 -1.1
3,062,253 - MPMX20_02930 0.75 -1.8
3,062,385 + -0.4
3,062,404 - -1.2
3,062,425 + -1.4
3,062,485 + MPMX20_02931 0.15 +0.5
3,062,502 + MPMX20_02931 0.21 -3.0
3,062,510 + MPMX20_02931 0.24 -0.4
3,062,510 + MPMX20_02931 0.24 -2.0
3,062,510 + MPMX20_02931 0.24 -1.6
3,062,517 + MPMX20_02931 0.26 +0.4
3,062,518 - MPMX20_02931 0.27 -3.1
3,062,518 - MPMX20_02931 0.27 -1.7
3,062,518 - MPMX20_02931 0.27 -3.1
3,062,518 - MPMX20_02931 0.27 -2.3
3,062,519 + MPMX20_02931 0.27 -0.9
3,062,525 - MPMX20_02931 0.29 +0.6
3,062,527 - MPMX20_02931 0.30 -0.7
3,062,529 + MPMX20_02931 0.30 -0.5
3,062,529 + MPMX20_02931 0.30 -1.4
3,062,529 + MPMX20_02931 0.30 -2.5
3,062,529 + MPMX20_02931 0.30 -1.2
3,062,537 - MPMX20_02931 0.33 -0.7
3,062,539 + MPMX20_02931 0.34 -1.8
3,062,543 + MPMX20_02931 0.35 -0.4
3,062,565 + MPMX20_02931 0.43 -2.6
3,062,579 + MPMX20_02931 0.48 -0.9
3,062,745 + -0.4
3,062,745 + -0.8
3,062,753 - +1.4
3,062,753 - +1.1
3,062,758 - -0.7
3,062,772 - +0.3
3,062,781 + +4.1
3,062,859 - MPMX20_02932 0.30 -0.9
3,062,859 - MPMX20_02932 0.30 -0.6
3,062,866 + MPMX20_02932 0.33 -1.2
3,062,871 - MPMX20_02932 0.35 +0.4
3,062,973 + MPMX20_02932 0.77 -0.9
3,062,988 + MPMX20_02932 0.83 -1.1
3,062,988 + MPMX20_02932 0.83 -1.1
3,062,988 + MPMX20_02932 0.83 -0.5
3,062,995 - MPMX20_02932 0.86 -0.6
3,062,996 - MPMX20_02932 0.86 -0.4
3,062,996 - MPMX20_02932 0.86 -0.9
3,062,996 - MPMX20_02932 0.86 -2.0
3,062,996 - MPMX20_02932 0.86 -1.8
3,063,205 + MPMX20_02933 0.10 -0.6
3,063,213 - MPMX20_02933 0.11 +0.2
3,063,213 - MPMX20_02933 0.11 -1.6
3,063,222 + MPMX20_02933 0.11 +0.4
3,063,294 + MPMX20_02933 0.17 -0.5
3,063,295 + MPMX20_02933 0.17 +0.1
3,063,295 + MPMX20_02933 0.17 -1.1
3,063,296 - MPMX20_02933 0.17 -1.3
3,063,344 - MPMX20_02933 0.21 -0.9
3,063,384 + MPMX20_02933 0.24 -1.5
3,063,387 - MPMX20_02933 0.24 -0.4
3,063,394 - MPMX20_02933 0.25 +0.6
3,063,420 - MPMX20_02933 0.27 +0.2
3,063,465 + MPMX20_02933 0.30 -1.4
3,063,534 + MPMX20_02933 0.35 -0.9
3,063,542 - MPMX20_02933 0.36 -1.0
3,063,542 - MPMX20_02933 0.36 -0.9
3,063,542 - MPMX20_02933 0.36 -0.5
3,063,558 + MPMX20_02933 0.37 +0.2
3,063,622 + MPMX20_02933 0.42 -1.8
3,063,659 - MPMX20_02933 0.45 +0.8
3,063,673 - MPMX20_02933 0.46 -0.7
3,063,673 - MPMX20_02933 0.46 -0.3
3,063,673 - MPMX20_02933 0.46 +1.2
3,063,693 - MPMX20_02933 0.48 -1.5
3,063,753 + MPMX20_02933 0.52 +0.1
3,063,766 - MPMX20_02933 0.53 -1.5
3,063,793 - MPMX20_02933 0.55 -0.4
3,063,805 + MPMX20_02933 0.56 -1.0
3,063,892 - MPMX20_02933 0.63 -0.5
3,063,892 - MPMX20_02933 0.63 -1.8
3,063,919 - MPMX20_02933 0.65 -2.3
3,063,979 - MPMX20_02933 0.70 -1.3
3,063,979 - MPMX20_02933 0.70 -1.8
3,063,990 - MPMX20_02933 0.71 -1.2
3,064,041 + MPMX20_02933 0.75 +0.2
3,064,064 - MPMX20_02933 0.76 -0.9
3,064,076 + MPMX20_02933 0.77 +0.2
3,064,084 - MPMX20_02933 0.78 -1.5
3,064,093 + MPMX20_02933 0.79 +1.4
3,064,101 - MPMX20_02933 0.79 +0.1
3,064,103 + MPMX20_02933 0.79 +1.4
3,064,147 + MPMX20_02933 0.83 +0.8
3,064,155 - MPMX20_02933 0.83 -2.3
3,064,203 - MPMX20_02933 0.87 +0.4
3,064,240 + MPMX20_02933 0.90 -1.3
3,064,240 + MPMX20_02933 0.90 -0.6
3,064,248 - -0.3
3,064,337 - -1.4
3,064,395 + +0.6
3,064,403 - +1.3
3,064,403 - -0.3
3,064,428 + -1.0
3,064,458 - MPMX20_02934 0.20 -0.5
3,064,555 + MPMX20_02934 0.51 -0.8
3,064,598 + MPMX20_02934 0.64 -0.0
3,064,601 - MPMX20_02934 0.65 +1.0
3,064,601 - MPMX20_02934 0.65 +0.9
3,064,606 - MPMX20_02934 0.67 +1.4
3,064,640 - MPMX20_02934 0.78 -0.1
3,064,673 - MPMX20_02934 0.88 +1.0
3,064,687 + +1.2
3,064,687 + +1.4
3,064,689 + -0.1
3,064,697 - +3.5
3,064,699 + -0.2
3,064,712 - -0.1
3,064,715 + -0.3
3,064,744 - +0.0
3,064,927 - +1.8
3,064,930 - +1.8
3,064,939 + -1.2
3,064,941 + -0.5
3,064,941 + +1.1
3,064,949 - +1.2
3,064,998 - +0.1
3,065,079 + +0.2
3,065,103 - +0.2
3,065,108 - MPMX20_02935 0.10 +1.1
3,065,119 + MPMX20_02935 0.11 -1.2
3,065,119 + MPMX20_02935 0.11 +0.6
3,065,127 - MPMX20_02935 0.11 +0.4
3,065,141 - MPMX20_02935 0.12 -0.0
3,065,142 + MPMX20_02935 0.12 +0.1
3,065,259 - MPMX20_02935 0.19 +0.4
3,065,314 - MPMX20_02935 0.22 +0.2
3,065,329 + MPMX20_02935 0.23 +0.4
3,065,337 - MPMX20_02935 0.24 +0.0

Or see this region's nucleotide sequence