Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02929 and MPMX20_02930 are separated by 2 nucleotides MPMX20_02930 and MPMX20_02931 are separated by 135 nucleotides MPMX20_02931 and MPMX20_02932 are separated by 59 nucleotides MPMX20_02932 and MPMX20_02933 are separated by 45 nucleotides MPMX20_02933 and MPMX20_02934 are separated by 26 nucleotides MPMX20_02934 and MPMX20_02935 are separated by 228 nucleotides
MPMX20_02929: MPMX20_02929 - hypothetical protein, at 3,061,994 to 3,062,086
_02929
MPMX20_02930: MPMX20_02930 - hypothetical protein, at 3,062,089 to 3,062,307
_02930
MPMX20_02931: MPMX20_02931 - hypothetical protein, at 3,062,443 to 3,062,724
_02931
MPMX20_02932: MPMX20_02932 - hypothetical protein, at 3,062,784 to 3,063,029
_02932
MPMX20_02933: MPMX20_02933 - Putative defective protein IntQ, at 3,063,075 to 3,064,370
_02933
MPMX20_02934: MPMX20_02934 - Flagellar hook-basal body complex protein FliE, at 3,064,397 to 3,064,708
_02934
MPMX20_02935: MPMX20_02935 - Flagellar M-ring protein, at 3,064,937 to 3,066,616
_02935
Position (kb)
3063
3064
3065 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3062.079 kb on - strand at 3062.080 kb on + strand at 3062.114 kb on - strand, within MPMX20_02930 at 3062.126 kb on - strand, within MPMX20_02930 at 3062.128 kb on + strand, within MPMX20_02930 at 3062.138 kb on + strand, within MPMX20_02930 at 3062.138 kb on + strand, within MPMX20_02930 at 3062.138 kb on + strand, within MPMX20_02930 at 3062.141 kb on - strand, within MPMX20_02930 at 3062.141 kb on - strand, within MPMX20_02930 at 3062.141 kb on - strand, within MPMX20_02930 at 3062.179 kb on - strand, within MPMX20_02930 at 3062.182 kb on + strand, within MPMX20_02930 at 3062.183 kb on - strand, within MPMX20_02930 at 3062.190 kb on - strand, within MPMX20_02930 at 3062.191 kb on + strand, within MPMX20_02930 at 3062.211 kb on + strand, within MPMX20_02930 at 3062.233 kb on + strand, within MPMX20_02930 at 3062.253 kb on - strand, within MPMX20_02930 at 3062.385 kb on + strand at 3062.404 kb on - strand at 3062.425 kb on + strand at 3062.485 kb on + strand, within MPMX20_02931 at 3062.502 kb on + strand, within MPMX20_02931 at 3062.510 kb on + strand, within MPMX20_02931 at 3062.510 kb on + strand, within MPMX20_02931 at 3062.510 kb on + strand, within MPMX20_02931 at 3062.517 kb on + strand, within MPMX20_02931 at 3062.518 kb on - strand, within MPMX20_02931 at 3062.518 kb on - strand, within MPMX20_02931 at 3062.518 kb on - strand, within MPMX20_02931 at 3062.518 kb on - strand, within MPMX20_02931 at 3062.519 kb on + strand, within MPMX20_02931 at 3062.525 kb on - strand, within MPMX20_02931 at 3062.527 kb on - strand, within MPMX20_02931 at 3062.529 kb on + strand, within MPMX20_02931 at 3062.529 kb on + strand, within MPMX20_02931 at 3062.529 kb on + strand, within MPMX20_02931 at 3062.529 kb on + strand, within MPMX20_02931 at 3062.537 kb on - strand, within MPMX20_02931 at 3062.539 kb on + strand, within MPMX20_02931 at 3062.543 kb on + strand, within MPMX20_02931 at 3062.565 kb on + strand, within MPMX20_02931 at 3062.579 kb on + strand, within MPMX20_02931 at 3062.745 kb on + strand at 3062.745 kb on + strand at 3062.753 kb on - strand at 3062.753 kb on - strand at 3062.758 kb on - strand at 3062.772 kb on - strand at 3062.781 kb on + strand at 3062.859 kb on - strand, within MPMX20_02932 at 3062.859 kb on - strand, within MPMX20_02932 at 3062.866 kb on + strand, within MPMX20_02932 at 3062.871 kb on - strand, within MPMX20_02932 at 3062.973 kb on + strand, within MPMX20_02932 at 3062.988 kb on + strand, within MPMX20_02932 at 3062.988 kb on + strand, within MPMX20_02932 at 3062.988 kb on + strand, within MPMX20_02932 at 3062.995 kb on - strand, within MPMX20_02932 at 3062.996 kb on - strand, within MPMX20_02932 at 3062.996 kb on - strand, within MPMX20_02932 at 3062.996 kb on - strand, within MPMX20_02932 at 3062.996 kb on - strand, within MPMX20_02932 at 3063.205 kb on + strand, within MPMX20_02933 at 3063.213 kb on - strand, within MPMX20_02933 at 3063.213 kb on - strand, within MPMX20_02933 at 3063.222 kb on + strand, within MPMX20_02933 at 3063.294 kb on + strand, within MPMX20_02933 at 3063.295 kb on + strand, within MPMX20_02933 at 3063.295 kb on + strand, within MPMX20_02933 at 3063.296 kb on - strand, within MPMX20_02933 at 3063.344 kb on - strand, within MPMX20_02933 at 3063.384 kb on + strand, within MPMX20_02933 at 3063.387 kb on - strand, within MPMX20_02933 at 3063.394 kb on - strand, within MPMX20_02933 at 3063.420 kb on - strand, within MPMX20_02933 at 3063.465 kb on + strand, within MPMX20_02933 at 3063.534 kb on + strand, within MPMX20_02933 at 3063.542 kb on - strand, within MPMX20_02933 at 3063.542 kb on - strand, within MPMX20_02933 at 3063.542 kb on - strand, within MPMX20_02933 at 3063.558 kb on + strand, within MPMX20_02933 at 3063.622 kb on + strand, within MPMX20_02933 at 3063.659 kb on - strand, within MPMX20_02933 at 3063.673 kb on - strand, within MPMX20_02933 at 3063.673 kb on - strand, within MPMX20_02933 at 3063.673 kb on - strand, within MPMX20_02933 at 3063.693 kb on - strand, within MPMX20_02933 at 3063.753 kb on + strand, within MPMX20_02933 at 3063.766 kb on - strand, within MPMX20_02933 at 3063.793 kb on - strand, within MPMX20_02933 at 3063.805 kb on + strand, within MPMX20_02933 at 3063.892 kb on - strand, within MPMX20_02933 at 3063.892 kb on - strand, within MPMX20_02933 at 3063.919 kb on - strand, within MPMX20_02933 at 3063.979 kb on - strand, within MPMX20_02933 at 3063.979 kb on - strand, within MPMX20_02933 at 3063.990 kb on - strand, within MPMX20_02933 at 3064.041 kb on + strand, within MPMX20_02933 at 3064.064 kb on - strand, within MPMX20_02933 at 3064.076 kb on + strand, within MPMX20_02933 at 3064.084 kb on - strand, within MPMX20_02933 at 3064.093 kb on + strand, within MPMX20_02933 at 3064.101 kb on - strand, within MPMX20_02933 at 3064.103 kb on + strand, within MPMX20_02933 at 3064.147 kb on + strand, within MPMX20_02933 at 3064.155 kb on - strand, within MPMX20_02933 at 3064.203 kb on - strand, within MPMX20_02933 at 3064.240 kb on + strand, within MPMX20_02933 at 3064.240 kb on + strand, within MPMX20_02933 at 3064.248 kb on - strand at 3064.337 kb on - strand at 3064.395 kb on + strand at 3064.403 kb on - strand at 3064.403 kb on - strand at 3064.428 kb on + strand at 3064.458 kb on - strand, within MPMX20_02934 at 3064.555 kb on + strand, within MPMX20_02934 at 3064.598 kb on + strand, within MPMX20_02934 at 3064.601 kb on - strand, within MPMX20_02934 at 3064.601 kb on - strand, within MPMX20_02934 at 3064.606 kb on - strand, within MPMX20_02934 at 3064.640 kb on - strand, within MPMX20_02934 at 3064.673 kb on - strand, within MPMX20_02934 at 3064.687 kb on + strand at 3064.687 kb on + strand at 3064.689 kb on + strand at 3064.697 kb on - strand at 3064.699 kb on + strand at 3064.712 kb on - strand at 3064.715 kb on + strand at 3064.744 kb on - strand at 3064.927 kb on - strand at 3064.930 kb on - strand at 3064.939 kb on + strand at 3064.941 kb on + strand at 3064.941 kb on + strand at 3064.949 kb on - strand at 3064.998 kb on - strand at 3065.079 kb on + strand at 3065.103 kb on - strand at 3065.108 kb on - strand, within MPMX20_02935 at 3065.119 kb on + strand, within MPMX20_02935 at 3065.119 kb on + strand, within MPMX20_02935 at 3065.127 kb on - strand, within MPMX20_02935 at 3065.141 kb on - strand, within MPMX20_02935 at 3065.142 kb on + strand, within MPMX20_02935 at 3065.259 kb on - strand, within MPMX20_02935 at 3065.314 kb on - strand, within MPMX20_02935 at 3065.329 kb on + strand, within MPMX20_02935 at 3065.337 kb on - strand, within MPMX20_02935
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,062,079 - -0.4 3,062,080 + -1.8 3,062,114 - MPMX20_02930 0.11 -0.4 3,062,126 - MPMX20_02930 0.17 -1.1 3,062,128 + MPMX20_02930 0.18 -2.2 3,062,138 + MPMX20_02930 0.22 -1.8 3,062,138 + MPMX20_02930 0.22 -2.4 3,062,138 + MPMX20_02930 0.22 -0.2 3,062,141 - MPMX20_02930 0.24 -1.9 3,062,141 - MPMX20_02930 0.24 -0.9 3,062,141 - MPMX20_02930 0.24 -1.5 3,062,179 - MPMX20_02930 0.41 -1.7 3,062,182 + MPMX20_02930 0.42 -2.6 3,062,183 - MPMX20_02930 0.43 -0.9 3,062,190 - MPMX20_02930 0.46 +0.8 3,062,191 + MPMX20_02930 0.47 -1.3 3,062,211 + MPMX20_02930 0.56 -0.8 3,062,233 + MPMX20_02930 0.66 -1.1 3,062,253 - MPMX20_02930 0.75 -1.8 3,062,385 + -0.4 3,062,404 - -1.2 3,062,425 + -1.4 3,062,485 + MPMX20_02931 0.15 +0.5 3,062,502 + MPMX20_02931 0.21 -3.0 3,062,510 + MPMX20_02931 0.24 -0.4 3,062,510 + MPMX20_02931 0.24 -2.0 3,062,510 + MPMX20_02931 0.24 -1.6 3,062,517 + MPMX20_02931 0.26 +0.4 3,062,518 - MPMX20_02931 0.27 -3.1 3,062,518 - MPMX20_02931 0.27 -1.7 3,062,518 - MPMX20_02931 0.27 -3.1 3,062,518 - MPMX20_02931 0.27 -2.3 3,062,519 + MPMX20_02931 0.27 -0.9 3,062,525 - MPMX20_02931 0.29 +0.6 3,062,527 - MPMX20_02931 0.30 -0.7 3,062,529 + MPMX20_02931 0.30 -0.5 3,062,529 + MPMX20_02931 0.30 -1.4 3,062,529 + MPMX20_02931 0.30 -2.5 3,062,529 + MPMX20_02931 0.30 -1.2 3,062,537 - MPMX20_02931 0.33 -0.7 3,062,539 + MPMX20_02931 0.34 -1.8 3,062,543 + MPMX20_02931 0.35 -0.4 3,062,565 + MPMX20_02931 0.43 -2.6 3,062,579 + MPMX20_02931 0.48 -0.9 3,062,745 + -0.4 3,062,745 + -0.8 3,062,753 - +1.4 3,062,753 - +1.1 3,062,758 - -0.7 3,062,772 - +0.3 3,062,781 + +4.1 3,062,859 - MPMX20_02932 0.30 -0.9 3,062,859 - MPMX20_02932 0.30 -0.6 3,062,866 + MPMX20_02932 0.33 -1.2 3,062,871 - MPMX20_02932 0.35 +0.4 3,062,973 + MPMX20_02932 0.77 -0.9 3,062,988 + MPMX20_02932 0.83 -1.1 3,062,988 + MPMX20_02932 0.83 -1.1 3,062,988 + MPMX20_02932 0.83 -0.5 3,062,995 - MPMX20_02932 0.86 -0.6 3,062,996 - MPMX20_02932 0.86 -0.4 3,062,996 - MPMX20_02932 0.86 -0.9 3,062,996 - MPMX20_02932 0.86 -2.0 3,062,996 - MPMX20_02932 0.86 -1.8 3,063,205 + MPMX20_02933 0.10 -0.6 3,063,213 - MPMX20_02933 0.11 +0.2 3,063,213 - MPMX20_02933 0.11 -1.6 3,063,222 + MPMX20_02933 0.11 +0.4 3,063,294 + MPMX20_02933 0.17 -0.5 3,063,295 + MPMX20_02933 0.17 +0.1 3,063,295 + MPMX20_02933 0.17 -1.1 3,063,296 - MPMX20_02933 0.17 -1.3 3,063,344 - MPMX20_02933 0.21 -0.9 3,063,384 + MPMX20_02933 0.24 -1.5 3,063,387 - MPMX20_02933 0.24 -0.4 3,063,394 - MPMX20_02933 0.25 +0.6 3,063,420 - MPMX20_02933 0.27 +0.2 3,063,465 + MPMX20_02933 0.30 -1.4 3,063,534 + MPMX20_02933 0.35 -0.9 3,063,542 - MPMX20_02933 0.36 -1.0 3,063,542 - MPMX20_02933 0.36 -0.9 3,063,542 - MPMX20_02933 0.36 -0.5 3,063,558 + MPMX20_02933 0.37 +0.2 3,063,622 + MPMX20_02933 0.42 -1.8 3,063,659 - MPMX20_02933 0.45 +0.8 3,063,673 - MPMX20_02933 0.46 -0.7 3,063,673 - MPMX20_02933 0.46 -0.3 3,063,673 - MPMX20_02933 0.46 +1.2 3,063,693 - MPMX20_02933 0.48 -1.5 3,063,753 + MPMX20_02933 0.52 +0.1 3,063,766 - MPMX20_02933 0.53 -1.5 3,063,793 - MPMX20_02933 0.55 -0.4 3,063,805 + MPMX20_02933 0.56 -1.0 3,063,892 - MPMX20_02933 0.63 -0.5 3,063,892 - MPMX20_02933 0.63 -1.8 3,063,919 - MPMX20_02933 0.65 -2.3 3,063,979 - MPMX20_02933 0.70 -1.3 3,063,979 - MPMX20_02933 0.70 -1.8 3,063,990 - MPMX20_02933 0.71 -1.2 3,064,041 + MPMX20_02933 0.75 +0.2 3,064,064 - MPMX20_02933 0.76 -0.9 3,064,076 + MPMX20_02933 0.77 +0.2 3,064,084 - MPMX20_02933 0.78 -1.5 3,064,093 + MPMX20_02933 0.79 +1.4 3,064,101 - MPMX20_02933 0.79 +0.1 3,064,103 + MPMX20_02933 0.79 +1.4 3,064,147 + MPMX20_02933 0.83 +0.8 3,064,155 - MPMX20_02933 0.83 -2.3 3,064,203 - MPMX20_02933 0.87 +0.4 3,064,240 + MPMX20_02933 0.90 -1.3 3,064,240 + MPMX20_02933 0.90 -0.6 3,064,248 - -0.3 3,064,337 - -1.4 3,064,395 + +0.6 3,064,403 - +1.3 3,064,403 - -0.3 3,064,428 + -1.0 3,064,458 - MPMX20_02934 0.20 -0.5 3,064,555 + MPMX20_02934 0.51 -0.8 3,064,598 + MPMX20_02934 0.64 -0.0 3,064,601 - MPMX20_02934 0.65 +1.0 3,064,601 - MPMX20_02934 0.65 +0.9 3,064,606 - MPMX20_02934 0.67 +1.4 3,064,640 - MPMX20_02934 0.78 -0.1 3,064,673 - MPMX20_02934 0.88 +1.0 3,064,687 + +1.2 3,064,687 + +1.4 3,064,689 + -0.1 3,064,697 - +3.5 3,064,699 + -0.2 3,064,712 - -0.1 3,064,715 + -0.3 3,064,744 - +0.0 3,064,927 - +1.8 3,064,930 - +1.8 3,064,939 + -1.2 3,064,941 + -0.5 3,064,941 + +1.1 3,064,949 - +1.2 3,064,998 - +0.1 3,065,079 + +0.2 3,065,103 - +0.2 3,065,108 - MPMX20_02935 0.10 +1.1 3,065,119 + MPMX20_02935 0.11 -1.2 3,065,119 + MPMX20_02935 0.11 +0.6 3,065,127 - MPMX20_02935 0.11 +0.4 3,065,141 - MPMX20_02935 0.12 -0.0 3,065,142 + MPMX20_02935 0.12 +0.1 3,065,259 - MPMX20_02935 0.19 +0.4 3,065,314 - MPMX20_02935 0.22 +0.2 3,065,329 + MPMX20_02935 0.23 +0.4 3,065,337 - MPMX20_02935 0.24 +0.0
Or see this region's nucleotide sequence