Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02716

Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02714 and MPMX20_02715 are separated by 131 nucleotidesMPMX20_02715 and MPMX20_02716 are separated by 6 nucleotidesMPMX20_02716 and MPMX20_02717 are separated by 52 nucleotides MPMX20_02714: MPMX20_02714 - putative ATP-dependent DNA helicase YoaA, at 2,867,390 to 2,869,300 _02714 MPMX20_02715: MPMX20_02715 - 2-iminobutanoate/2-iminopropanoate deaminase, at 2,869,432 to 2,869,776 _02715 MPMX20_02716: MPMX20_02716 - hypothetical protein, at 2,869,783 to 2,869,965 _02716 MPMX20_02717: MPMX20_02717 - Aminodeoxychorismate synthase component 1, at 2,870,018 to 2,871,373 _02717 Position (kb) 2869 2870Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 2868.786 kb on - strand, within MPMX20_02714at 2868.868 kb on - strand, within MPMX20_02714at 2868.876 kb on + strand, within MPMX20_02714at 2868.880 kb on + strand, within MPMX20_02714at 2868.899 kb on - strand, within MPMX20_02714at 2868.970 kb on + strand, within MPMX20_02714at 2868.970 kb on + strand, within MPMX20_02714at 2868.970 kb on + strand, within MPMX20_02714at 2869.059 kb on - strand, within MPMX20_02714at 2869.081 kb on + strand, within MPMX20_02714at 2869.089 kb on - strand, within MPMX20_02714at 2869.089 kb on - strand, within MPMX20_02714at 2869.097 kb on + strand, within MPMX20_02714at 2869.205 kb on + strandat 2869.243 kb on + strandat 2869.336 kb on - strandat 2869.343 kb on - strandat 2869.349 kb on + strandat 2869.349 kb on + strandat 2869.349 kb on + strandat 2869.392 kb on - strandat 2869.392 kb on - strandat 2869.408 kb on + strandat 2869.456 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.481 kb on + strand, within MPMX20_02715at 2869.502 kb on - strand, within MPMX20_02715at 2869.534 kb on - strand, within MPMX20_02715at 2869.566 kb on + strand, within MPMX20_02715at 2869.566 kb on + strand, within MPMX20_02715at 2869.574 kb on - strand, within MPMX20_02715at 2869.574 kb on - strand, within MPMX20_02715at 2869.574 kb on - strand, within MPMX20_02715at 2869.610 kb on + strand, within MPMX20_02715at 2869.618 kb on - strand, within MPMX20_02715at 2869.682 kb on - strand, within MPMX20_02715at 2869.707 kb on - strand, within MPMX20_02715at 2869.709 kb on + strand, within MPMX20_02715at 2869.712 kb on + strand, within MPMX20_02715at 2869.712 kb on + strand, within MPMX20_02715at 2869.836 kb on - strand, within MPMX20_02716at 2869.899 kb on - strand, within MPMX20_02716at 2869.949 kb on + strandat 2870.006 kb on + strandat 2870.008 kb on + strandat 2870.008 kb on + strandat 2870.008 kb on + strandat 2870.008 kb on + strandat 2870.013 kb on + strandat 2870.013 kb on + strandat 2870.016 kb on - strandat 2870.016 kb on - strandat 2870.016 kb on - strandat 2870.021 kb on - strandat 2870.021 kb on - strandat 2870.021 kb on - strandat 2870.091 kb on - strandat 2870.183 kb on - strand, within MPMX20_02717at 2870.194 kb on - strand, within MPMX20_02717at 2870.194 kb on - strand, within MPMX20_02717at 2870.209 kb on - strand, within MPMX20_02717at 2870.244 kb on - strand, within MPMX20_02717at 2870.256 kb on + strand, within MPMX20_02717at 2870.283 kb on - strand, within MPMX20_02717at 2870.284 kb on + strand, within MPMX20_02717at 2870.284 kb on + strand, within MPMX20_02717at 2870.284 kb on + strand, within MPMX20_02717at 2870.292 kb on - strand, within MPMX20_02717at 2870.320 kb on + strand, within MPMX20_02717at 2870.346 kb on + strand, within MPMX20_02717at 2870.358 kb on - strand, within MPMX20_02717at 2870.374 kb on - strand, within MPMX20_02717at 2870.444 kb on - strand, within MPMX20_02717at 2870.479 kb on - strand, within MPMX20_02717at 2870.496 kb on - strand, within MPMX20_02717at 2870.511 kb on + strand, within MPMX20_02717at 2870.524 kb on + strand, within MPMX20_02717at 2870.538 kb on - strand, within MPMX20_02717at 2870.564 kb on - strand, within MPMX20_02717at 2870.587 kb on + strand, within MPMX20_02717at 2870.595 kb on - strand, within MPMX20_02717at 2870.595 kb on - strand, within MPMX20_02717at 2870.595 kb on - strand, within MPMX20_02717at 2870.611 kb on + strand, within MPMX20_02717at 2870.612 kb on + strand, within MPMX20_02717at 2870.620 kb on - strand, within MPMX20_02717at 2870.652 kb on + strand, within MPMX20_02717at 2870.660 kb on - strand, within MPMX20_02717at 2870.742 kb on - strand, within MPMX20_02717at 2870.751 kb on + strand, within MPMX20_02717at 2870.758 kb on + strand, within MPMX20_02717at 2870.768 kb on + strand, within MPMX20_02717at 2870.768 kb on + strand, within MPMX20_02717at 2870.768 kb on + strand, within MPMX20_02717at 2870.768 kb on + strand, within MPMX20_02717at 2870.768 kb on + strand, within MPMX20_02717at 2870.768 kb on + strand, within MPMX20_02717at 2870.768 kb on + strand, within MPMX20_02717at 2870.768 kb on + strand, within MPMX20_02717at 2870.771 kb on - strand, within MPMX20_02717at 2870.776 kb on + strand, within MPMX20_02717at 2870.776 kb on + strand, within MPMX20_02717at 2870.776 kb on - strand, within MPMX20_02717at 2870.776 kb on - strand, within MPMX20_02717at 2870.776 kb on - strand, within MPMX20_02717at 2870.776 kb on - strand, within MPMX20_02717at 2870.776 kb on - strand, within MPMX20_02717at 2870.776 kb on - strand, within MPMX20_02717at 2870.776 kb on - strand, within MPMX20_02717at 2870.811 kb on + strand, within MPMX20_02717at 2870.816 kb on + strand, within MPMX20_02717at 2870.816 kb on + strand, within MPMX20_02717at 2870.819 kb on - strand, within MPMX20_02717at 2870.824 kb on - strand, within MPMX20_02717at 2870.824 kb on - strand, within MPMX20_02717at 2870.824 kb on - strand, within MPMX20_02717at 2870.824 kb on - strand, within MPMX20_02717at 2870.909 kb on - strand, within MPMX20_02717at 2870.909 kb on - strand, within MPMX20_02717at 2870.931 kb on - strand, within MPMX20_02717at 2870.960 kb on - strand, within MPMX20_02717

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,868,786 - MPMX20_02714 0.73 -0.9
2,868,868 - MPMX20_02714 0.77 -1.1
2,868,876 + MPMX20_02714 0.78 -1.8
2,868,880 + MPMX20_02714 0.78 +0.7
2,868,899 - MPMX20_02714 0.79 -2.0
2,868,970 + MPMX20_02714 0.83 -0.9
2,868,970 + MPMX20_02714 0.83 +0.9
2,868,970 + MPMX20_02714 0.83 +0.2
2,869,059 - MPMX20_02714 0.87 -0.5
2,869,081 + MPMX20_02714 0.88 +0.8
2,869,089 - MPMX20_02714 0.89 +0.7
2,869,089 - MPMX20_02714 0.89 -1.4
2,869,097 + MPMX20_02714 0.89 +0.4
2,869,205 + -0.8
2,869,243 + +0.2
2,869,336 - -1.2
2,869,343 - -1.0
2,869,349 + -0.6
2,869,349 + +0.2
2,869,349 + -0.5
2,869,392 - -0.1
2,869,392 - -1.3
2,869,408 + -1.6
2,869,456 + +0.5
2,869,466 + -0.9
2,869,466 + +0.2
2,869,466 + -2.0
2,869,466 + -0.1
2,869,466 + +0.2
2,869,466 + -2.1
2,869,466 + +5.3
2,869,466 + -2.2
2,869,466 + -1.2
2,869,466 + -1.3
2,869,474 - MPMX20_02715 0.12 -0.7
2,869,474 - MPMX20_02715 0.12 +0.1
2,869,474 - MPMX20_02715 0.12 +0.4
2,869,474 - MPMX20_02715 0.12 -0.3
2,869,474 - MPMX20_02715 0.12 -0.1
2,869,474 - MPMX20_02715 0.12 -0.9
2,869,474 - MPMX20_02715 0.12 -0.9
2,869,474 - MPMX20_02715 0.12 +1.7
2,869,481 + MPMX20_02715 0.14 -0.2
2,869,502 - MPMX20_02715 0.20 -0.6
2,869,534 - MPMX20_02715 0.30 -0.1
2,869,566 + MPMX20_02715 0.39 -1.5
2,869,566 + MPMX20_02715 0.39 -0.4
2,869,574 - MPMX20_02715 0.41 -0.6
2,869,574 - MPMX20_02715 0.41 +1.2
2,869,574 - MPMX20_02715 0.41 -1.1
2,869,610 + MPMX20_02715 0.52 -0.3
2,869,618 - MPMX20_02715 0.54 -1.4
2,869,682 - MPMX20_02715 0.72 -0.6
2,869,707 - MPMX20_02715 0.80 -0.5
2,869,709 + MPMX20_02715 0.80 -1.6
2,869,712 + MPMX20_02715 0.81 -0.6
2,869,712 + MPMX20_02715 0.81 -0.3
2,869,836 - MPMX20_02716 0.29 +5.7
2,869,899 - MPMX20_02716 0.63 -0.0
2,869,949 + +0.8
2,870,006 + -0.3
2,870,008 + -0.4
2,870,008 + -1.1
2,870,008 + +1.2
2,870,008 + +1.4
2,870,013 + +0.2
2,870,013 + -1.0
2,870,016 - -0.6
2,870,016 - +0.7
2,870,016 - -0.1
2,870,021 - +0.5
2,870,021 - -0.8
2,870,021 - -3.0
2,870,091 - -1.7
2,870,183 - MPMX20_02717 0.12 +0.4
2,870,194 - MPMX20_02717 0.13 -0.7
2,870,194 - MPMX20_02717 0.13 -1.3
2,870,209 - MPMX20_02717 0.14 -0.6
2,870,244 - MPMX20_02717 0.17 -0.3
2,870,256 + MPMX20_02717 0.18 -2.3
2,870,283 - MPMX20_02717 0.20 -1.0
2,870,284 + MPMX20_02717 0.20 +1.3
2,870,284 + MPMX20_02717 0.20 -0.8
2,870,284 + MPMX20_02717 0.20 +1.1
2,870,292 - MPMX20_02717 0.20 -0.8
2,870,320 + MPMX20_02717 0.22 +3.2
2,870,346 + MPMX20_02717 0.24 -1.3
2,870,358 - MPMX20_02717 0.25 +0.9
2,870,374 - MPMX20_02717 0.26 -0.0
2,870,444 - MPMX20_02717 0.31 +0.2
2,870,479 - MPMX20_02717 0.34 +2.8
2,870,496 - MPMX20_02717 0.35 -1.8
2,870,511 + MPMX20_02717 0.36 +0.4
2,870,524 + MPMX20_02717 0.37 +3.2
2,870,538 - MPMX20_02717 0.38 -1.1
2,870,564 - MPMX20_02717 0.40 -0.2
2,870,587 + MPMX20_02717 0.42 -0.7
2,870,595 - MPMX20_02717 0.43 -0.5
2,870,595 - MPMX20_02717 0.43 +0.2
2,870,595 - MPMX20_02717 0.43 -0.9
2,870,611 + MPMX20_02717 0.44 -0.8
2,870,612 + MPMX20_02717 0.44 -0.1
2,870,620 - MPMX20_02717 0.44 -0.3
2,870,652 + MPMX20_02717 0.47 -0.6
2,870,660 - MPMX20_02717 0.47 -0.8
2,870,742 - MPMX20_02717 0.53 +0.1
2,870,751 + MPMX20_02717 0.54 +0.5
2,870,758 + MPMX20_02717 0.55 -1.0
2,870,768 + MPMX20_02717 0.55 +0.3
2,870,768 + MPMX20_02717 0.55 +0.2
2,870,768 + MPMX20_02717 0.55 -0.6
2,870,768 + MPMX20_02717 0.55 +0.1
2,870,768 + MPMX20_02717 0.55 -0.1
2,870,768 + MPMX20_02717 0.55 -0.3
2,870,768 + MPMX20_02717 0.55 +0.3
2,870,768 + MPMX20_02717 0.55 +0.1
2,870,771 - MPMX20_02717 0.56 -0.0
2,870,776 + MPMX20_02717 0.56 +1.1
2,870,776 + MPMX20_02717 0.56 -1.2
2,870,776 - MPMX20_02717 0.56 -2.0
2,870,776 - MPMX20_02717 0.56 +0.7
2,870,776 - MPMX20_02717 0.56 -0.1
2,870,776 - MPMX20_02717 0.56 +0.3
2,870,776 - MPMX20_02717 0.56 +0.9
2,870,776 - MPMX20_02717 0.56 +0.2
2,870,776 - MPMX20_02717 0.56 -0.7
2,870,811 + MPMX20_02717 0.58 +1.8
2,870,816 + MPMX20_02717 0.59 +0.2
2,870,816 + MPMX20_02717 0.59 -3.0
2,870,819 - MPMX20_02717 0.59 -0.1
2,870,824 - MPMX20_02717 0.59 +0.5
2,870,824 - MPMX20_02717 0.59 -2.0
2,870,824 - MPMX20_02717 0.59 +0.7
2,870,824 - MPMX20_02717 0.59 -1.7
2,870,909 - MPMX20_02717 0.66 -2.5
2,870,909 - MPMX20_02717 0.66 +0.2
2,870,931 - MPMX20_02717 0.67 +0.4
2,870,960 - MPMX20_02717 0.69 -0.2

Or see this region's nucleotide sequence