Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02714 and MPMX20_02715 are separated by 131 nucleotides MPMX20_02715 and MPMX20_02716 are separated by 6 nucleotides MPMX20_02716 and MPMX20_02717 are separated by 52 nucleotides
MPMX20_02714: MPMX20_02714 - putative ATP-dependent DNA helicase YoaA, at 2,867,390 to 2,869,300
_02714
MPMX20_02715: MPMX20_02715 - 2-iminobutanoate/2-iminopropanoate deaminase, at 2,869,432 to 2,869,776
_02715
MPMX20_02716: MPMX20_02716 - hypothetical protein, at 2,869,783 to 2,869,965
_02716
MPMX20_02717: MPMX20_02717 - Aminodeoxychorismate synthase component 1, at 2,870,018 to 2,871,373
_02717
Position (kb)
2869
2870 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2868.786 kb on - strand, within MPMX20_02714 at 2868.868 kb on - strand, within MPMX20_02714 at 2868.876 kb on + strand, within MPMX20_02714 at 2868.880 kb on + strand, within MPMX20_02714 at 2868.899 kb on - strand, within MPMX20_02714 at 2868.970 kb on + strand, within MPMX20_02714 at 2868.970 kb on + strand, within MPMX20_02714 at 2868.970 kb on + strand, within MPMX20_02714 at 2869.059 kb on - strand, within MPMX20_02714 at 2869.081 kb on + strand, within MPMX20_02714 at 2869.089 kb on - strand, within MPMX20_02714 at 2869.089 kb on - strand, within MPMX20_02714 at 2869.097 kb on + strand, within MPMX20_02714 at 2869.205 kb on + strand at 2869.243 kb on + strand at 2869.336 kb on - strand at 2869.343 kb on - strand at 2869.349 kb on + strand at 2869.349 kb on + strand at 2869.349 kb on + strand at 2869.392 kb on - strand at 2869.392 kb on - strand at 2869.408 kb on + strand at 2869.456 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.481 kb on + strand, within MPMX20_02715 at 2869.502 kb on - strand, within MPMX20_02715 at 2869.534 kb on - strand, within MPMX20_02715 at 2869.566 kb on + strand, within MPMX20_02715 at 2869.566 kb on + strand, within MPMX20_02715 at 2869.574 kb on - strand, within MPMX20_02715 at 2869.574 kb on - strand, within MPMX20_02715 at 2869.574 kb on - strand, within MPMX20_02715 at 2869.610 kb on + strand, within MPMX20_02715 at 2869.618 kb on - strand, within MPMX20_02715 at 2869.682 kb on - strand, within MPMX20_02715 at 2869.707 kb on - strand, within MPMX20_02715 at 2869.709 kb on + strand, within MPMX20_02715 at 2869.712 kb on + strand, within MPMX20_02715 at 2869.712 kb on + strand, within MPMX20_02715 at 2869.836 kb on - strand, within MPMX20_02716 at 2869.899 kb on - strand, within MPMX20_02716 at 2869.949 kb on + strand at 2870.006 kb on + strand at 2870.008 kb on + strand at 2870.008 kb on + strand at 2870.008 kb on + strand at 2870.008 kb on + strand at 2870.013 kb on + strand at 2870.013 kb on + strand at 2870.016 kb on - strand at 2870.016 kb on - strand at 2870.016 kb on - strand at 2870.021 kb on - strand at 2870.021 kb on - strand at 2870.021 kb on - strand at 2870.091 kb on - strand at 2870.183 kb on - strand, within MPMX20_02717 at 2870.194 kb on - strand, within MPMX20_02717 at 2870.194 kb on - strand, within MPMX20_02717 at 2870.209 kb on - strand, within MPMX20_02717 at 2870.244 kb on - strand, within MPMX20_02717 at 2870.256 kb on + strand, within MPMX20_02717 at 2870.283 kb on - strand, within MPMX20_02717 at 2870.284 kb on + strand, within MPMX20_02717 at 2870.284 kb on + strand, within MPMX20_02717 at 2870.284 kb on + strand, within MPMX20_02717 at 2870.292 kb on - strand, within MPMX20_02717 at 2870.320 kb on + strand, within MPMX20_02717 at 2870.346 kb on + strand, within MPMX20_02717 at 2870.358 kb on - strand, within MPMX20_02717 at 2870.374 kb on - strand, within MPMX20_02717 at 2870.444 kb on - strand, within MPMX20_02717 at 2870.479 kb on - strand, within MPMX20_02717 at 2870.496 kb on - strand, within MPMX20_02717 at 2870.511 kb on + strand, within MPMX20_02717 at 2870.524 kb on + strand, within MPMX20_02717 at 2870.538 kb on - strand, within MPMX20_02717 at 2870.564 kb on - strand, within MPMX20_02717 at 2870.587 kb on + strand, within MPMX20_02717 at 2870.595 kb on - strand, within MPMX20_02717 at 2870.595 kb on - strand, within MPMX20_02717 at 2870.595 kb on - strand, within MPMX20_02717 at 2870.611 kb on + strand, within MPMX20_02717 at 2870.612 kb on + strand, within MPMX20_02717 at 2870.620 kb on - strand, within MPMX20_02717 at 2870.652 kb on + strand, within MPMX20_02717 at 2870.660 kb on - strand, within MPMX20_02717 at 2870.742 kb on - strand, within MPMX20_02717 at 2870.751 kb on + strand, within MPMX20_02717 at 2870.758 kb on + strand, within MPMX20_02717 at 2870.768 kb on + strand, within MPMX20_02717 at 2870.768 kb on + strand, within MPMX20_02717 at 2870.768 kb on + strand, within MPMX20_02717 at 2870.768 kb on + strand, within MPMX20_02717 at 2870.768 kb on + strand, within MPMX20_02717 at 2870.768 kb on + strand, within MPMX20_02717 at 2870.768 kb on + strand, within MPMX20_02717 at 2870.768 kb on + strand, within MPMX20_02717 at 2870.771 kb on - strand, within MPMX20_02717 at 2870.776 kb on + strand, within MPMX20_02717 at 2870.776 kb on + strand, within MPMX20_02717 at 2870.776 kb on - strand, within MPMX20_02717 at 2870.776 kb on - strand, within MPMX20_02717 at 2870.776 kb on - strand, within MPMX20_02717 at 2870.776 kb on - strand, within MPMX20_02717 at 2870.776 kb on - strand, within MPMX20_02717 at 2870.776 kb on - strand, within MPMX20_02717 at 2870.776 kb on - strand, within MPMX20_02717 at 2870.811 kb on + strand, within MPMX20_02717 at 2870.816 kb on + strand, within MPMX20_02717 at 2870.816 kb on + strand, within MPMX20_02717 at 2870.819 kb on - strand, within MPMX20_02717 at 2870.824 kb on - strand, within MPMX20_02717 at 2870.824 kb on - strand, within MPMX20_02717 at 2870.824 kb on - strand, within MPMX20_02717 at 2870.824 kb on - strand, within MPMX20_02717 at 2870.909 kb on - strand, within MPMX20_02717 at 2870.909 kb on - strand, within MPMX20_02717 at 2870.931 kb on - strand, within MPMX20_02717 at 2870.960 kb on - strand, within MPMX20_02717
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,868,786 - MPMX20_02714 0.73 -0.9 2,868,868 - MPMX20_02714 0.77 -1.1 2,868,876 + MPMX20_02714 0.78 -1.8 2,868,880 + MPMX20_02714 0.78 +0.7 2,868,899 - MPMX20_02714 0.79 -2.0 2,868,970 + MPMX20_02714 0.83 -0.9 2,868,970 + MPMX20_02714 0.83 +0.9 2,868,970 + MPMX20_02714 0.83 +0.2 2,869,059 - MPMX20_02714 0.87 -0.5 2,869,081 + MPMX20_02714 0.88 +0.8 2,869,089 - MPMX20_02714 0.89 +0.7 2,869,089 - MPMX20_02714 0.89 -1.4 2,869,097 + MPMX20_02714 0.89 +0.4 2,869,205 + -0.8 2,869,243 + +0.2 2,869,336 - -1.2 2,869,343 - -1.0 2,869,349 + -0.6 2,869,349 + +0.2 2,869,349 + -0.5 2,869,392 - -0.1 2,869,392 - -1.3 2,869,408 + -1.6 2,869,456 + +0.5 2,869,466 + -0.9 2,869,466 + +0.2 2,869,466 + -2.0 2,869,466 + -0.1 2,869,466 + +0.2 2,869,466 + -2.1 2,869,466 + +5.3 2,869,466 + -2.2 2,869,466 + -1.2 2,869,466 + -1.3 2,869,474 - MPMX20_02715 0.12 -0.7 2,869,474 - MPMX20_02715 0.12 +0.1 2,869,474 - MPMX20_02715 0.12 +0.4 2,869,474 - MPMX20_02715 0.12 -0.3 2,869,474 - MPMX20_02715 0.12 -0.1 2,869,474 - MPMX20_02715 0.12 -0.9 2,869,474 - MPMX20_02715 0.12 -0.9 2,869,474 - MPMX20_02715 0.12 +1.7 2,869,481 + MPMX20_02715 0.14 -0.2 2,869,502 - MPMX20_02715 0.20 -0.6 2,869,534 - MPMX20_02715 0.30 -0.1 2,869,566 + MPMX20_02715 0.39 -1.5 2,869,566 + MPMX20_02715 0.39 -0.4 2,869,574 - MPMX20_02715 0.41 -0.6 2,869,574 - MPMX20_02715 0.41 +1.2 2,869,574 - MPMX20_02715 0.41 -1.1 2,869,610 + MPMX20_02715 0.52 -0.3 2,869,618 - MPMX20_02715 0.54 -1.4 2,869,682 - MPMX20_02715 0.72 -0.6 2,869,707 - MPMX20_02715 0.80 -0.5 2,869,709 + MPMX20_02715 0.80 -1.6 2,869,712 + MPMX20_02715 0.81 -0.6 2,869,712 + MPMX20_02715 0.81 -0.3 2,869,836 - MPMX20_02716 0.29 +5.7 2,869,899 - MPMX20_02716 0.63 -0.0 2,869,949 + +0.8 2,870,006 + -0.3 2,870,008 + -0.4 2,870,008 + -1.1 2,870,008 + +1.2 2,870,008 + +1.4 2,870,013 + +0.2 2,870,013 + -1.0 2,870,016 - -0.6 2,870,016 - +0.7 2,870,016 - -0.1 2,870,021 - +0.5 2,870,021 - -0.8 2,870,021 - -3.0 2,870,091 - -1.7 2,870,183 - MPMX20_02717 0.12 +0.4 2,870,194 - MPMX20_02717 0.13 -0.7 2,870,194 - MPMX20_02717 0.13 -1.3 2,870,209 - MPMX20_02717 0.14 -0.6 2,870,244 - MPMX20_02717 0.17 -0.3 2,870,256 + MPMX20_02717 0.18 -2.3 2,870,283 - MPMX20_02717 0.20 -1.0 2,870,284 + MPMX20_02717 0.20 +1.3 2,870,284 + MPMX20_02717 0.20 -0.8 2,870,284 + MPMX20_02717 0.20 +1.1 2,870,292 - MPMX20_02717 0.20 -0.8 2,870,320 + MPMX20_02717 0.22 +3.2 2,870,346 + MPMX20_02717 0.24 -1.3 2,870,358 - MPMX20_02717 0.25 +0.9 2,870,374 - MPMX20_02717 0.26 -0.0 2,870,444 - MPMX20_02717 0.31 +0.2 2,870,479 - MPMX20_02717 0.34 +2.8 2,870,496 - MPMX20_02717 0.35 -1.8 2,870,511 + MPMX20_02717 0.36 +0.4 2,870,524 + MPMX20_02717 0.37 +3.2 2,870,538 - MPMX20_02717 0.38 -1.1 2,870,564 - MPMX20_02717 0.40 -0.2 2,870,587 + MPMX20_02717 0.42 -0.7 2,870,595 - MPMX20_02717 0.43 -0.5 2,870,595 - MPMX20_02717 0.43 +0.2 2,870,595 - MPMX20_02717 0.43 -0.9 2,870,611 + MPMX20_02717 0.44 -0.8 2,870,612 + MPMX20_02717 0.44 -0.1 2,870,620 - MPMX20_02717 0.44 -0.3 2,870,652 + MPMX20_02717 0.47 -0.6 2,870,660 - MPMX20_02717 0.47 -0.8 2,870,742 - MPMX20_02717 0.53 +0.1 2,870,751 + MPMX20_02717 0.54 +0.5 2,870,758 + MPMX20_02717 0.55 -1.0 2,870,768 + MPMX20_02717 0.55 +0.3 2,870,768 + MPMX20_02717 0.55 +0.2 2,870,768 + MPMX20_02717 0.55 -0.6 2,870,768 + MPMX20_02717 0.55 +0.1 2,870,768 + MPMX20_02717 0.55 -0.1 2,870,768 + MPMX20_02717 0.55 -0.3 2,870,768 + MPMX20_02717 0.55 +0.3 2,870,768 + MPMX20_02717 0.55 +0.1 2,870,771 - MPMX20_02717 0.56 -0.0 2,870,776 + MPMX20_02717 0.56 +1.1 2,870,776 + MPMX20_02717 0.56 -1.2 2,870,776 - MPMX20_02717 0.56 -2.0 2,870,776 - MPMX20_02717 0.56 +0.7 2,870,776 - MPMX20_02717 0.56 -0.1 2,870,776 - MPMX20_02717 0.56 +0.3 2,870,776 - MPMX20_02717 0.56 +0.9 2,870,776 - MPMX20_02717 0.56 +0.2 2,870,776 - MPMX20_02717 0.56 -0.7 2,870,811 + MPMX20_02717 0.58 +1.8 2,870,816 + MPMX20_02717 0.59 +0.2 2,870,816 + MPMX20_02717 0.59 -3.0 2,870,819 - MPMX20_02717 0.59 -0.1 2,870,824 - MPMX20_02717 0.59 +0.5 2,870,824 - MPMX20_02717 0.59 -2.0 2,870,824 - MPMX20_02717 0.59 +0.7 2,870,824 - MPMX20_02717 0.59 -1.7 2,870,909 - MPMX20_02717 0.66 -2.5 2,870,909 - MPMX20_02717 0.66 +0.2 2,870,931 - MPMX20_02717 0.67 +0.4 2,870,960 - MPMX20_02717 0.69 -0.2
Or see this region's nucleotide sequence