Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00532

Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00531 and MPMX20_00532 are separated by 367 nucleotidesMPMX20_00532 and MPMX20_00533 are separated by 1 nucleotides MPMX20_00531: MPMX20_00531 - Anaerobic ribonucleoside-triphosphate reductase, at 547,033 to 549,171 _00531 MPMX20_00532: MPMX20_00532 - hypothetical protein, at 549,539 to 550,111 _00532 MPMX20_00533: MPMX20_00533 - Mannosylglycerate hydrolase, at 550,113 to 552,710 _00533 Position (kb) 549 550 551Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 548.547 kb on - strand, within MPMX20_00531at 548.569 kb on + strand, within MPMX20_00531at 548.627 kb on + strand, within MPMX20_00531at 548.650 kb on + strand, within MPMX20_00531at 548.658 kb on - strand, within MPMX20_00531at 548.749 kb on + strand, within MPMX20_00531at 548.757 kb on - strand, within MPMX20_00531at 548.790 kb on + strand, within MPMX20_00531at 548.835 kb on + strand, within MPMX20_00531at 548.840 kb on + strand, within MPMX20_00531at 548.840 kb on + strand, within MPMX20_00531at 548.840 kb on + strand, within MPMX20_00531at 548.848 kb on - strand, within MPMX20_00531at 548.874 kb on + strand, within MPMX20_00531at 548.946 kb on + strand, within MPMX20_00531at 548.984 kb on + strandat 549.031 kb on + strandat 549.083 kb on + strandat 549.090 kb on - strandat 549.105 kb on - strandat 549.122 kb on + strandat 549.130 kb on - strandat 549.157 kb on - strandat 549.167 kb on + strandat 549.175 kb on - strandat 549.242 kb on + strandat 549.242 kb on + strandat 549.243 kb on + strandat 549.250 kb on - strandat 549.250 kb on - strandat 549.259 kb on - strandat 549.282 kb on + strandat 549.285 kb on + strandat 549.520 kb on - strandat 549.520 kb on - strandat 549.543 kb on - strandat 549.568 kb on - strandat 549.641 kb on - strand, within MPMX20_00532at 549.746 kb on - strand, within MPMX20_00532at 549.831 kb on - strand, within MPMX20_00532at 549.833 kb on + strand, within MPMX20_00532at 549.925 kb on + strand, within MPMX20_00532at 549.962 kb on + strand, within MPMX20_00532at 549.962 kb on + strand, within MPMX20_00532at 549.962 kb on + strand, within MPMX20_00532at 549.964 kb on + strand, within MPMX20_00532at 549.976 kb on + strand, within MPMX20_00532at 549.976 kb on + strand, within MPMX20_00532at 549.984 kb on - strand, within MPMX20_00532at 549.984 kb on - strand, within MPMX20_00532at 549.984 kb on - strand, within MPMX20_00532at 550.037 kb on + strand, within MPMX20_00532at 550.080 kb on + strandat 550.106 kb on + strandat 550.205 kb on + strandat 550.205 kb on + strandat 550.223 kb on - strandat 550.282 kb on + strandat 550.290 kb on - strandat 550.295 kb on - strandat 550.365 kb on - strandat 550.393 kb on + strand, within MPMX20_00533at 550.420 kb on + strand, within MPMX20_00533at 550.420 kb on + strand, within MPMX20_00533at 550.427 kb on - strand, within MPMX20_00533at 550.433 kb on - strand, within MPMX20_00533at 550.495 kb on - strand, within MPMX20_00533at 550.513 kb on + strand, within MPMX20_00533at 550.521 kb on - strand, within MPMX20_00533at 550.521 kb on - strand, within MPMX20_00533at 550.529 kb on + strand, within MPMX20_00533at 550.547 kb on + strand, within MPMX20_00533at 550.547 kb on - strand, within MPMX20_00533at 550.581 kb on + strand, within MPMX20_00533at 550.588 kb on + strand, within MPMX20_00533at 550.623 kb on - strand, within MPMX20_00533at 550.626 kb on + strand, within MPMX20_00533at 550.626 kb on + strand, within MPMX20_00533at 550.626 kb on + strand, within MPMX20_00533at 550.626 kb on + strand, within MPMX20_00533at 550.626 kb on + strand, within MPMX20_00533at 550.634 kb on - strand, within MPMX20_00533at 550.634 kb on - strand, within MPMX20_00533at 550.634 kb on - strand, within MPMX20_00533at 550.634 kb on - strand, within MPMX20_00533at 550.634 kb on - strand, within MPMX20_00533at 550.634 kb on - strand, within MPMX20_00533at 550.648 kb on - strand, within MPMX20_00533at 550.686 kb on + strand, within MPMX20_00533at 550.694 kb on - strand, within MPMX20_00533at 550.723 kb on - strand, within MPMX20_00533at 550.769 kb on + strand, within MPMX20_00533at 550.823 kb on + strand, within MPMX20_00533at 550.839 kb on - strand, within MPMX20_00533at 550.845 kb on - strand, within MPMX20_00533at 550.894 kb on + strand, within MPMX20_00533at 551.086 kb on - strand, within MPMX20_00533

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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548,547 - MPMX20_00531 0.71 -0.4
548,569 + MPMX20_00531 0.72 -1.2
548,627 + MPMX20_00531 0.75 -0.9
548,650 + MPMX20_00531 0.76 +1.5
548,658 - MPMX20_00531 0.76 +2.2
548,749 + MPMX20_00531 0.80 +0.9
548,757 - MPMX20_00531 0.81 +0.3
548,790 + MPMX20_00531 0.82 -0.7
548,835 + MPMX20_00531 0.84 +0.3
548,840 + MPMX20_00531 0.84 -1.7
548,840 + MPMX20_00531 0.84 -1.5
548,840 + MPMX20_00531 0.84 -0.5
548,848 - MPMX20_00531 0.85 -0.5
548,874 + MPMX20_00531 0.86 -1.7
548,946 + MPMX20_00531 0.89 -1.0
548,984 + +0.9
549,031 + +1.2
549,083 + +0.7
549,090 - -0.2
549,105 - +1.9
549,122 + -0.1
549,130 - -0.3
549,157 - +0.2
549,167 + +1.1
549,175 - +1.6
549,242 + +0.6
549,242 + -0.6
549,243 + +1.0
549,250 - +0.5
549,250 - -0.3
549,259 - +1.8
549,282 + -0.8
549,285 + -2.0
549,520 - +0.6
549,520 - -0.4
549,543 - +0.2
549,568 - -0.4
549,641 - MPMX20_00532 0.18 +1.5
549,746 - MPMX20_00532 0.36 +0.0
549,831 - MPMX20_00532 0.51 -0.0
549,833 + MPMX20_00532 0.51 -0.1
549,925 + MPMX20_00532 0.67 -0.9
549,962 + MPMX20_00532 0.74 -0.1
549,962 + MPMX20_00532 0.74 -1.7
549,962 + MPMX20_00532 0.74 +0.6
549,964 + MPMX20_00532 0.74 +0.6
549,976 + MPMX20_00532 0.76 -2.4
549,976 + MPMX20_00532 0.76 -0.9
549,984 - MPMX20_00532 0.78 -0.4
549,984 - MPMX20_00532 0.78 -2.7
549,984 - MPMX20_00532 0.78 -1.0
550,037 + MPMX20_00532 0.87 +5.2
550,080 + -1.7
550,106 + -1.0
550,205 + -0.9
550,205 + -1.4
550,223 - -0.5
550,282 + -0.9
550,290 - -0.6
550,295 - -0.6
550,365 - -1.3
550,393 + MPMX20_00533 0.11 -0.3
550,420 + MPMX20_00533 0.12 +0.1
550,420 + MPMX20_00533 0.12 -0.8
550,427 - MPMX20_00533 0.12 -0.1
550,433 - MPMX20_00533 0.12 -0.1
550,495 - MPMX20_00533 0.15 -0.5
550,513 + MPMX20_00533 0.15 -1.3
550,521 - MPMX20_00533 0.16 +0.9
550,521 - MPMX20_00533 0.16 -0.6
550,529 + MPMX20_00533 0.16 -0.1
550,547 + MPMX20_00533 0.17 -0.7
550,547 - MPMX20_00533 0.17 -0.7
550,581 + MPMX20_00533 0.18 +0.3
550,588 + MPMX20_00533 0.18 -0.1
550,623 - MPMX20_00533 0.20 -1.0
550,626 + MPMX20_00533 0.20 +0.4
550,626 + MPMX20_00533 0.20 -0.9
550,626 + MPMX20_00533 0.20 -1.1
550,626 + MPMX20_00533 0.20 +1.0
550,626 + MPMX20_00533 0.20 +2.2
550,634 - MPMX20_00533 0.20 -1.0
550,634 - MPMX20_00533 0.20 -1.6
550,634 - MPMX20_00533 0.20 +0.1
550,634 - MPMX20_00533 0.20 -0.7
550,634 - MPMX20_00533 0.20 -1.3
550,634 - MPMX20_00533 0.20 -1.1
550,648 - MPMX20_00533 0.21 +0.1
550,686 + MPMX20_00533 0.22 +0.3
550,694 - MPMX20_00533 0.22 +0.1
550,723 - MPMX20_00533 0.23 -0.7
550,769 + MPMX20_00533 0.25 +0.7
550,823 + MPMX20_00533 0.27 +0.8
550,839 - MPMX20_00533 0.28 -2.0
550,845 - MPMX20_00533 0.28 +4.2
550,894 + MPMX20_00533 0.30 -1.2
551,086 - MPMX20_00533 0.37 +0.1

Or see this region's nucleotide sequence