Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03325

Experiment: TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03324 and MPMX20_03325 are separated by 290 nucleotidesMPMX20_03325 and MPMX20_03326 are separated by 19 nucleotides MPMX20_03324: MPMX20_03324 - NADP-dependent malic enzyme, at 3,491,422 to 3,493,701 _03324 MPMX20_03325: MPMX20_03325 - Transaldolase, at 3,493,992 to 3,494,942 _03325 MPMX20_03326: MPMX20_03326 - Transketolase 2, at 3,494,962 to 3,496,950 _03326 Position (kb) 3493 3494 3495Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3493.063 kb on - strand, within MPMX20_03324at 3493.063 kb on - strand, within MPMX20_03324at 3493.089 kb on + strand, within MPMX20_03324at 3493.164 kb on + strand, within MPMX20_03324at 3493.168 kb on - strand, within MPMX20_03324at 3493.213 kb on - strand, within MPMX20_03324at 3493.237 kb on + strand, within MPMX20_03324at 3493.245 kb on - strand, within MPMX20_03324at 3493.301 kb on - strand, within MPMX20_03324at 3493.306 kb on - strand, within MPMX20_03324at 3493.583 kb on + strandat 3493.593 kb on + strandat 3493.732 kb on - strandat 3493.766 kb on - strandat 3493.779 kb on - strandat 3493.801 kb on + strandat 3493.825 kb on - strandat 3493.858 kb on - strandat 3493.863 kb on + strandat 3493.947 kb on - strandat 3493.948 kb on - strandat 3494.080 kb on - strandat 3494.080 kb on - strandat 3494.095 kb on + strand, within MPMX20_03325at 3494.105 kb on + strand, within MPMX20_03325at 3494.105 kb on + strand, within MPMX20_03325at 3494.161 kb on + strand, within MPMX20_03325at 3494.161 kb on + strand, within MPMX20_03325at 3494.161 kb on + strand, within MPMX20_03325at 3494.169 kb on - strand, within MPMX20_03325at 3494.169 kb on - strand, within MPMX20_03325at 3494.179 kb on - strand, within MPMX20_03325at 3494.184 kb on - strand, within MPMX20_03325at 3494.303 kb on + strand, within MPMX20_03325at 3494.386 kb on - strand, within MPMX20_03325at 3494.388 kb on + strand, within MPMX20_03325at 3494.462 kb on + strand, within MPMX20_03325at 3494.478 kb on + strand, within MPMX20_03325at 3494.483 kb on + strand, within MPMX20_03325at 3494.485 kb on - strand, within MPMX20_03325at 3494.547 kb on - strand, within MPMX20_03325at 3494.623 kb on + strand, within MPMX20_03325at 3494.628 kb on + strand, within MPMX20_03325at 3494.631 kb on - strand, within MPMX20_03325at 3494.657 kb on - strand, within MPMX20_03325at 3494.704 kb on + strand, within MPMX20_03325at 3494.709 kb on - strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.722 kb on + strand, within MPMX20_03325at 3494.730 kb on - strand, within MPMX20_03325at 3494.730 kb on - strand, within MPMX20_03325at 3494.730 kb on - strand, within MPMX20_03325at 3494.730 kb on - strand, within MPMX20_03325at 3494.730 kb on - strand, within MPMX20_03325at 3494.730 kb on - strand, within MPMX20_03325at 3494.785 kb on + strand, within MPMX20_03325at 3494.793 kb on - strand, within MPMX20_03325at 3494.804 kb on + strand, within MPMX20_03325at 3494.812 kb on - strand, within MPMX20_03325at 3494.899 kb on - strandat 3494.944 kb on - strandat 3494.969 kb on + strandat 3494.974 kb on + strandat 3494.974 kb on + strandat 3494.974 kb on - strandat 3495.036 kb on + strandat 3495.128 kb on - strandat 3495.134 kb on + strandat 3495.142 kb on - strandat 3495.142 kb on - strandat 3495.158 kb on + strandat 3495.158 kb on + strandat 3495.158 kb on + strandat 3495.158 kb on + strandat 3495.166 kb on - strand, within MPMX20_03326at 3495.166 kb on - strand, within MPMX20_03326at 3495.166 kb on - strand, within MPMX20_03326at 3495.166 kb on - strand, within MPMX20_03326at 3495.168 kb on + strand, within MPMX20_03326at 3495.168 kb on + strand, within MPMX20_03326at 3495.176 kb on - strand, within MPMX20_03326at 3495.176 kb on - strand, within MPMX20_03326at 3495.186 kb on - strand, within MPMX20_03326at 3495.269 kb on + strand, within MPMX20_03326at 3495.307 kb on + strand, within MPMX20_03326at 3495.313 kb on + strand, within MPMX20_03326at 3495.313 kb on + strand, within MPMX20_03326at 3495.313 kb on + strand, within MPMX20_03326at 3495.340 kb on - strand, within MPMX20_03326at 3495.411 kb on + strand, within MPMX20_03326at 3495.428 kb on + strand, within MPMX20_03326at 3495.473 kb on + strand, within MPMX20_03326at 3495.481 kb on - strand, within MPMX20_03326at 3495.481 kb on - strand, within MPMX20_03326at 3495.481 kb on - strand, within MPMX20_03326at 3495.483 kb on + strand, within MPMX20_03326at 3495.507 kb on + strand, within MPMX20_03326at 3495.562 kb on + strand, within MPMX20_03326at 3495.751 kb on - strand, within MPMX20_03326at 3495.756 kb on - strand, within MPMX20_03326at 3495.769 kb on + strand, within MPMX20_03326at 3495.777 kb on - strand, within MPMX20_03326at 3495.833 kb on - strand, within MPMX20_03326at 3495.853 kb on - strand, within MPMX20_03326

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,493,063 - MPMX20_03324 0.72 +0.1
3,493,063 - MPMX20_03324 0.72 -1.1
3,493,089 + MPMX20_03324 0.73 -0.1
3,493,164 + MPMX20_03324 0.76 -0.5
3,493,168 - MPMX20_03324 0.77 +0.1
3,493,213 - MPMX20_03324 0.79 +0.5
3,493,237 + MPMX20_03324 0.80 -1.1
3,493,245 - MPMX20_03324 0.80 +4.6
3,493,301 - MPMX20_03324 0.82 -0.5
3,493,306 - MPMX20_03324 0.83 -0.9
3,493,583 + -1.5
3,493,593 + +4.0
3,493,732 - +0.6
3,493,766 - -1.7
3,493,779 - -1.0
3,493,801 + +0.5
3,493,825 - +1.2
3,493,858 - +1.0
3,493,863 + -0.2
3,493,947 - +1.0
3,493,948 - +1.0
3,494,080 - -1.0
3,494,080 - -0.6
3,494,095 + MPMX20_03325 0.11 -1.0
3,494,105 + MPMX20_03325 0.12 +0.5
3,494,105 + MPMX20_03325 0.12 -0.9
3,494,161 + MPMX20_03325 0.18 -0.6
3,494,161 + MPMX20_03325 0.18 -1.6
3,494,161 + MPMX20_03325 0.18 -0.1
3,494,169 - MPMX20_03325 0.19 +0.2
3,494,169 - MPMX20_03325 0.19 -0.8
3,494,179 - MPMX20_03325 0.20 -0.2
3,494,184 - MPMX20_03325 0.20 +0.2
3,494,303 + MPMX20_03325 0.33 +1.2
3,494,386 - MPMX20_03325 0.41 -0.7
3,494,388 + MPMX20_03325 0.42 +1.4
3,494,462 + MPMX20_03325 0.49 -0.2
3,494,478 + MPMX20_03325 0.51 -0.3
3,494,483 + MPMX20_03325 0.52 -0.9
3,494,485 - MPMX20_03325 0.52 -0.6
3,494,547 - MPMX20_03325 0.58 +0.2
3,494,623 + MPMX20_03325 0.66 -2.7
3,494,628 + MPMX20_03325 0.67 +0.6
3,494,631 - MPMX20_03325 0.67 -1.7
3,494,657 - MPMX20_03325 0.70 -1.4
3,494,704 + MPMX20_03325 0.75 -2.1
3,494,709 - MPMX20_03325 0.75 +0.4
3,494,722 + MPMX20_03325 0.77 -1.2
3,494,722 + MPMX20_03325 0.77 -0.2
3,494,722 + MPMX20_03325 0.77 -1.0
3,494,722 + MPMX20_03325 0.77 -2.7
3,494,722 + MPMX20_03325 0.77 -2.3
3,494,722 + MPMX20_03325 0.77 -2.2
3,494,722 + MPMX20_03325 0.77 +0.6
3,494,722 + MPMX20_03325 0.77 +0.2
3,494,722 + MPMX20_03325 0.77 -0.6
3,494,722 + MPMX20_03325 0.77 +0.2
3,494,722 + MPMX20_03325 0.77 +0.4
3,494,730 - MPMX20_03325 0.78 +0.6
3,494,730 - MPMX20_03325 0.78 +0.5
3,494,730 - MPMX20_03325 0.78 +2.0
3,494,730 - MPMX20_03325 0.78 +0.9
3,494,730 - MPMX20_03325 0.78 -0.2
3,494,730 - MPMX20_03325 0.78 +0.1
3,494,785 + MPMX20_03325 0.83 -1.1
3,494,793 - MPMX20_03325 0.84 -1.2
3,494,804 + MPMX20_03325 0.85 +2.2
3,494,812 - MPMX20_03325 0.86 -1.2
3,494,899 - -0.2
3,494,944 - +0.3
3,494,969 + -1.6
3,494,974 + +0.6
3,494,974 + +2.4
3,494,974 - -0.0
3,495,036 + -0.4
3,495,128 - +0.2
3,495,134 + -1.5
3,495,142 - +0.6
3,495,142 - -0.5
3,495,158 + -0.4
3,495,158 + -0.9
3,495,158 + -0.1
3,495,158 + -0.8
3,495,166 - MPMX20_03326 0.10 -0.9
3,495,166 - MPMX20_03326 0.10 +2.0
3,495,166 - MPMX20_03326 0.10 +0.2
3,495,166 - MPMX20_03326 0.10 +1.6
3,495,168 + MPMX20_03326 0.10 +0.2
3,495,168 + MPMX20_03326 0.10 +0.6
3,495,176 - MPMX20_03326 0.11 -2.7
3,495,176 - MPMX20_03326 0.11 -2.3
3,495,186 - MPMX20_03326 0.11 -1.4
3,495,269 + MPMX20_03326 0.15 -0.0
3,495,307 + MPMX20_03326 0.17 -0.2
3,495,313 + MPMX20_03326 0.18 +1.4
3,495,313 + MPMX20_03326 0.18 +0.6
3,495,313 + MPMX20_03326 0.18 -1.5
3,495,340 - MPMX20_03326 0.19 +0.3
3,495,411 + MPMX20_03326 0.23 +1.4
3,495,428 + MPMX20_03326 0.23 -1.7
3,495,473 + MPMX20_03326 0.26 +0.6
3,495,481 - MPMX20_03326 0.26 +0.3
3,495,481 - MPMX20_03326 0.26 -0.5
3,495,481 - MPMX20_03326 0.26 -0.2
3,495,483 + MPMX20_03326 0.26 +0.1
3,495,507 + MPMX20_03326 0.27 -1.5
3,495,562 + MPMX20_03326 0.30 -1.8
3,495,751 - MPMX20_03326 0.40 +0.2
3,495,756 - MPMX20_03326 0.40 -0.8
3,495,769 + MPMX20_03326 0.41 -1.0
3,495,777 - MPMX20_03326 0.41 -0.7
3,495,833 - MPMX20_03326 0.44 -1.1
3,495,853 - MPMX20_03326 0.45 -2.3

Or see this region's nucleotide sequence