Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02765

Experiment: TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02763 and MPMX20_02764 are separated by 131 nucleotidesMPMX20_02764 and MPMX20_02765 overlap by 4 nucleotidesMPMX20_02765 and MPMX20_02766 are separated by 39 nucleotides MPMX20_02763: MPMX20_02763 - hypothetical protein, at 2,919,852 to 2,919,977 _02763 MPMX20_02764: MPMX20_02764 - Zinc import ATP-binding protein ZnuC, at 2,920,109 to 2,920,864 _02764 MPMX20_02765: MPMX20_02765 - High-affinity zinc uptake system membrane protein ZnuB, at 2,920,861 to 2,921,646 _02765 MPMX20_02766: MPMX20_02766 - Holliday junction ATP-dependent DNA helicase RuvB, at 2,921,686 to 2,922,696 _02766 Position (kb) 2920 2921 2922Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2919.947 kb on + strand, within MPMX20_02763at 2919.987 kb on - strandat 2919.993 kb on + strandat 2920.154 kb on - strandat 2920.154 kb on - strandat 2920.325 kb on - strand, within MPMX20_02764at 2920.428 kb on - strand, within MPMX20_02764at 2920.519 kb on - strand, within MPMX20_02764at 2920.519 kb on - strand, within MPMX20_02764at 2920.519 kb on - strand, within MPMX20_02764at 2920.521 kb on + strand, within MPMX20_02764at 2920.529 kb on - strand, within MPMX20_02764at 2920.540 kb on + strand, within MPMX20_02764at 2920.563 kb on - strand, within MPMX20_02764at 2920.565 kb on - strand, within MPMX20_02764at 2920.565 kb on - strand, within MPMX20_02764at 2920.565 kb on - strand, within MPMX20_02764at 2920.621 kb on - strand, within MPMX20_02764at 2920.623 kb on + strand, within MPMX20_02764at 2920.631 kb on - strand, within MPMX20_02764at 2920.663 kb on + strand, within MPMX20_02764at 2920.687 kb on - strand, within MPMX20_02764at 2920.707 kb on + strand, within MPMX20_02764at 2920.724 kb on - strand, within MPMX20_02764at 2920.778 kb on - strand, within MPMX20_02764at 2920.895 kb on + strandat 2920.903 kb on - strandat 2920.903 kb on - strandat 2920.982 kb on + strand, within MPMX20_02765at 2921.000 kb on + strand, within MPMX20_02765at 2921.000 kb on + strand, within MPMX20_02765at 2921.068 kb on + strand, within MPMX20_02765at 2921.078 kb on - strand, within MPMX20_02765at 2921.150 kb on + strand, within MPMX20_02765at 2921.430 kb on + strand, within MPMX20_02765at 2921.550 kb on - strand, within MPMX20_02765at 2921.593 kb on - strandat 2921.595 kb on - strandat 2921.650 kb on + strandat 2921.663 kb on - strandat 2921.675 kb on + strandat 2921.778 kb on + strandat 2921.778 kb on + strandat 2921.893 kb on - strand, within MPMX20_02766at 2921.903 kb on - strand, within MPMX20_02766at 2922.050 kb on - strand, within MPMX20_02766at 2922.194 kb on - strand, within MPMX20_02766at 2922.335 kb on + strand, within MPMX20_02766at 2922.355 kb on - strand, within MPMX20_02766at 2922.389 kb on - strand, within MPMX20_02766at 2922.389 kb on - strand, within MPMX20_02766at 2922.389 kb on - strand, within MPMX20_02766at 2922.391 kb on + strand, within MPMX20_02766at 2922.440 kb on - strand, within MPMX20_02766at 2922.458 kb on - strand, within MPMX20_02766at 2922.491 kb on + strand, within MPMX20_02766at 2922.626 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,919,947 + MPMX20_02763 0.75 -0.7
2,919,987 - +2.3
2,919,993 + +1.0
2,920,154 - -0.1
2,920,154 - +1.0
2,920,325 - MPMX20_02764 0.29 +0.0
2,920,428 - MPMX20_02764 0.42 -1.0
2,920,519 - MPMX20_02764 0.54 -0.4
2,920,519 - MPMX20_02764 0.54 +3.6
2,920,519 - MPMX20_02764 0.54 -2.1
2,920,521 + MPMX20_02764 0.54 +2.0
2,920,529 - MPMX20_02764 0.56 +0.6
2,920,540 + MPMX20_02764 0.57 +2.0
2,920,563 - MPMX20_02764 0.60 -0.1
2,920,565 - MPMX20_02764 0.60 +0.7
2,920,565 - MPMX20_02764 0.60 -0.1
2,920,565 - MPMX20_02764 0.60 -2.4
2,920,621 - MPMX20_02764 0.68 +0.6
2,920,623 + MPMX20_02764 0.68 -0.0
2,920,631 - MPMX20_02764 0.69 -1.2
2,920,663 + MPMX20_02764 0.73 -0.3
2,920,687 - MPMX20_02764 0.76 -2.4
2,920,707 + MPMX20_02764 0.79 +0.6
2,920,724 - MPMX20_02764 0.81 +1.4
2,920,778 - MPMX20_02764 0.88 -0.0
2,920,895 + -1.6
2,920,903 - -1.1
2,920,903 - -0.0
2,920,982 + MPMX20_02765 0.15 -2.2
2,921,000 + MPMX20_02765 0.18 -2.4
2,921,000 + MPMX20_02765 0.18 -1.1
2,921,068 + MPMX20_02765 0.26 +1.0
2,921,078 - MPMX20_02765 0.28 -1.6
2,921,150 + MPMX20_02765 0.37 -1.1
2,921,430 + MPMX20_02765 0.72 -2.8
2,921,550 - MPMX20_02765 0.88 -1.5
2,921,593 - +1.4
2,921,595 - +0.4
2,921,650 + +3.0
2,921,663 - -0.9
2,921,675 + -0.4
2,921,778 + +0.2
2,921,778 + -0.2
2,921,893 - MPMX20_02766 0.20 +0.4
2,921,903 - MPMX20_02766 0.21 -0.9
2,922,050 - MPMX20_02766 0.36 +2.0
2,922,194 - MPMX20_02766 0.50 -0.7
2,922,335 + MPMX20_02766 0.64 +1.0
2,922,355 - MPMX20_02766 0.66 +1.0
2,922,389 - MPMX20_02766 0.70 -0.9
2,922,389 - MPMX20_02766 0.70 -1.2
2,922,389 - MPMX20_02766 0.70 +1.4
2,922,391 + MPMX20_02766 0.70 +0.2
2,922,440 - MPMX20_02766 0.75 -0.7
2,922,458 - MPMX20_02766 0.76 +0.4
2,922,491 + MPMX20_02766 0.80 -0.0
2,922,626 - -0.3

Or see this region's nucleotide sequence