Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01411

Experiment: TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01410 and MPMX20_01411 are separated by 24 nucleotidesMPMX20_01411 and MPMX20_01412 are separated by 3 nucleotidesMPMX20_01412 and MPMX20_01413 overlap by 8 nucleotidesMPMX20_01413 and MPMX20_01414 are separated by 1 nucleotides MPMX20_01410: MPMX20_01410 - GTP 3',8-cyclase, at 1,475,061 to 1,476,050 _01410 MPMX20_01411: MPMX20_01411 - Molybdenum cofactor biosynthesis protein B, at 1,476,075 to 1,476,587 _01411 MPMX20_01412: MPMX20_01412 - Cyclic pyranopterin monophosphate synthase, at 1,476,591 to 1,477,076 _01412 MPMX20_01413: MPMX20_01413 - Molybdopterin synthase sulfur carrier subunit, at 1,477,069 to 1,477,314 _01413 MPMX20_01414: MPMX20_01414 - Molybdopterin synthase catalytic subunit, at 1,477,316 to 1,477,768 _01414 Position (kb) 1476 1477Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1475.154 kb on - strandat 1475.282 kb on - strand, within MPMX20_01410at 1475.364 kb on - strand, within MPMX20_01410at 1475.406 kb on + strand, within MPMX20_01410at 1475.437 kb on + strand, within MPMX20_01410at 1475.474 kb on + strand, within MPMX20_01410at 1475.504 kb on - strand, within MPMX20_01410at 1475.550 kb on + strand, within MPMX20_01410at 1475.558 kb on - strand, within MPMX20_01410at 1475.558 kb on - strand, within MPMX20_01410at 1475.560 kb on - strand, within MPMX20_01410at 1475.577 kb on - strand, within MPMX20_01410at 1475.580 kb on + strand, within MPMX20_01410at 1475.763 kb on - strand, within MPMX20_01410at 1475.812 kb on - strand, within MPMX20_01410at 1475.825 kb on + strand, within MPMX20_01410at 1475.835 kb on + strand, within MPMX20_01410at 1475.875 kb on + strand, within MPMX20_01410at 1475.896 kb on + strand, within MPMX20_01410at 1476.005 kb on + strandat 1476.040 kb on - strandat 1476.086 kb on - strandat 1476.112 kb on + strandat 1476.117 kb on + strandat 1476.149 kb on + strand, within MPMX20_01411at 1476.157 kb on - strand, within MPMX20_01411at 1476.171 kb on - strand, within MPMX20_01411at 1476.290 kb on - strand, within MPMX20_01411at 1476.364 kb on - strand, within MPMX20_01411at 1476.389 kb on + strand, within MPMX20_01411at 1476.547 kb on + strandat 1476.608 kb on + strandat 1476.608 kb on + strandat 1476.608 kb on + strandat 1476.608 kb on + strandat 1476.608 kb on + strandat 1476.616 kb on - strandat 1476.616 kb on - strandat 1476.616 kb on - strandat 1476.702 kb on + strand, within MPMX20_01412at 1476.776 kb on + strand, within MPMX20_01412at 1476.784 kb on - strand, within MPMX20_01412at 1476.844 kb on + strand, within MPMX20_01412at 1476.867 kb on + strand, within MPMX20_01412at 1476.867 kb on + strand, within MPMX20_01412at 1476.877 kb on - strand, within MPMX20_01412at 1476.893 kb on + strand, within MPMX20_01412at 1476.934 kb on + strand, within MPMX20_01412at 1476.977 kb on + strand, within MPMX20_01412at 1477.078 kb on - strandat 1477.137 kb on - strand, within MPMX20_01413at 1477.138 kb on + strand, within MPMX20_01413at 1477.206 kb on + strand, within MPMX20_01413at 1477.214 kb on - strand, within MPMX20_01413at 1477.229 kb on + strand, within MPMX20_01413at 1477.300 kb on + strandat 1477.349 kb on - strandat 1477.367 kb on + strand, within MPMX20_01414at 1477.367 kb on + strand, within MPMX20_01414at 1477.367 kb on + strand, within MPMX20_01414at 1477.367 kb on + strand, within MPMX20_01414at 1477.367 kb on + strand, within MPMX20_01414at 1477.377 kb on + strand, within MPMX20_01414at 1477.406 kb on + strand, within MPMX20_01414at 1477.414 kb on - strand, within MPMX20_01414at 1477.434 kb on + strand, within MPMX20_01414at 1477.434 kb on + strand, within MPMX20_01414at 1477.452 kb on + strand, within MPMX20_01414at 1477.452 kb on + strand, within MPMX20_01414at 1477.452 kb on + strand, within MPMX20_01414at 1477.460 kb on - strand, within MPMX20_01414at 1477.467 kb on + strand, within MPMX20_01414at 1477.512 kb on + strand, within MPMX20_01414at 1477.554 kb on + strand, within MPMX20_01414at 1477.562 kb on - strand, within MPMX20_01414

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,475,154 - -0.2
1,475,282 - MPMX20_01410 0.22 -0.6
1,475,364 - MPMX20_01410 0.31 -1.7
1,475,406 + MPMX20_01410 0.35 +1.3
1,475,437 + MPMX20_01410 0.38 -0.5
1,475,474 + MPMX20_01410 0.42 -1.6
1,475,504 - MPMX20_01410 0.45 -0.6
1,475,550 + MPMX20_01410 0.49 -0.7
1,475,558 - MPMX20_01410 0.50 +0.1
1,475,558 - MPMX20_01410 0.50 -1.4
1,475,560 - MPMX20_01410 0.50 -0.4
1,475,577 - MPMX20_01410 0.52 -0.5
1,475,580 + MPMX20_01410 0.52 +0.3
1,475,763 - MPMX20_01410 0.71 -0.8
1,475,812 - MPMX20_01410 0.76 +1.3
1,475,825 + MPMX20_01410 0.77 -1.9
1,475,835 + MPMX20_01410 0.78 -0.0
1,475,875 + MPMX20_01410 0.82 +1.3
1,475,896 + MPMX20_01410 0.84 -1.0
1,476,005 + +0.2
1,476,040 - -0.9
1,476,086 - +0.3
1,476,112 + -1.1
1,476,117 + +1.3
1,476,149 + MPMX20_01411 0.14 -1.8
1,476,157 - MPMX20_01411 0.16 -2.7
1,476,171 - MPMX20_01411 0.19 +0.1
1,476,290 - MPMX20_01411 0.42 -1.4
1,476,364 - MPMX20_01411 0.56 -0.4
1,476,389 + MPMX20_01411 0.61 -0.3
1,476,547 + +0.6
1,476,608 + -0.8
1,476,608 + +0.3
1,476,608 + -0.7
1,476,608 + -1.0
1,476,608 + +1.9
1,476,616 - -1.1
1,476,616 - -1.2
1,476,616 - +2.9
1,476,702 + MPMX20_01412 0.23 +1.3
1,476,776 + MPMX20_01412 0.38 -1.4
1,476,784 - MPMX20_01412 0.40 +0.0
1,476,844 + MPMX20_01412 0.52 -1.6
1,476,867 + MPMX20_01412 0.57 +0.1
1,476,867 + MPMX20_01412 0.57 +0.2
1,476,877 - MPMX20_01412 0.59 -0.4
1,476,893 + MPMX20_01412 0.62 -0.7
1,476,934 + MPMX20_01412 0.71 -0.2
1,476,977 + MPMX20_01412 0.79 -0.7
1,477,078 - -1.2
1,477,137 - MPMX20_01413 0.28 -1.4
1,477,138 + MPMX20_01413 0.28 -1.1
1,477,206 + MPMX20_01413 0.56 +1.9
1,477,214 - MPMX20_01413 0.59 -0.1
1,477,229 + MPMX20_01413 0.65 -0.4
1,477,300 + +0.2
1,477,349 - -0.5
1,477,367 + MPMX20_01414 0.11 +0.1
1,477,367 + MPMX20_01414 0.11 -0.9
1,477,367 + MPMX20_01414 0.11 +1.9
1,477,367 + MPMX20_01414 0.11 +0.6
1,477,367 + MPMX20_01414 0.11 -1.2
1,477,377 + MPMX20_01414 0.13 -1.0
1,477,406 + MPMX20_01414 0.20 -0.8
1,477,414 - MPMX20_01414 0.22 -1.0
1,477,434 + MPMX20_01414 0.26 -1.8
1,477,434 + MPMX20_01414 0.26 -1.6
1,477,452 + MPMX20_01414 0.30 -0.7
1,477,452 + MPMX20_01414 0.30 -1.3
1,477,452 + MPMX20_01414 0.30 +0.7
1,477,460 - MPMX20_01414 0.32 -0.2
1,477,467 + MPMX20_01414 0.33 +0.1
1,477,512 + MPMX20_01414 0.43 -1.2
1,477,554 + MPMX20_01414 0.53 -1.4
1,477,562 - MPMX20_01414 0.54 +1.0

Or see this region's nucleotide sequence