Experiment: TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00289 and MPMX20_00290 overlap by 4 nucleotides MPMX20_00290 and MPMX20_00291 are separated by 70 nucleotides
MPMX20_00289: MPMX20_00289 - Cation/acetate symporter ActP, at 307,747 to 309,396
_00289
MPMX20_00290: MPMX20_00290 - Inner membrane protein YjcH, at 309,393 to 309,707
_00290
MPMX20_00291: MPMX20_00291 - Acetyl-coenzyme A synthetase, at 309,778 to 311,736
_00291
Position (kb) 309
310 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 308.428 kb on + strand, within MPMX20_00289 at 308.431 kb on - strand, within MPMX20_00289 at 308.517 kb on + strand, within MPMX20_00289 at 308.529 kb on + strand, within MPMX20_00289 at 308.594 kb on - strand, within MPMX20_00289 at 308.636 kb on + strand, within MPMX20_00289 at 308.662 kb on - strand, within MPMX20_00289 at 308.683 kb on - strand, within MPMX20_00289 at 308.790 kb on - strand, within MPMX20_00289 at 308.798 kb on + strand, within MPMX20_00289 at 308.820 kb on - strand, within MPMX20_00289 at 308.856 kb on + strand, within MPMX20_00289 at 308.917 kb on - strand, within MPMX20_00289 at 308.917 kb on - strand, within MPMX20_00289 at 308.928 kb on + strand, within MPMX20_00289 at 308.952 kb on - strand, within MPMX20_00289 at 308.952 kb on - strand, within MPMX20_00289 at 308.970 kb on + strand, within MPMX20_00289 at 308.970 kb on + strand, within MPMX20_00289 at 309.009 kb on + strand, within MPMX20_00289 at 309.058 kb on + strand, within MPMX20_00289 at 309.066 kb on - strand, within MPMX20_00289 at 309.099 kb on - strand, within MPMX20_00289 at 309.104 kb on + strand, within MPMX20_00289 at 309.104 kb on + strand, within MPMX20_00289 at 309.104 kb on + strand, within MPMX20_00289 at 309.104 kb on + strand, within MPMX20_00289 at 309.111 kb on - strand, within MPMX20_00289 at 309.111 kb on - strand, within MPMX20_00289 at 309.112 kb on - strand, within MPMX20_00289 at 309.112 kb on - strand, within MPMX20_00289 at 309.112 kb on - strand, within MPMX20_00289 at 309.112 kb on - strand, within MPMX20_00289 at 309.112 kb on - strand, within MPMX20_00289 at 309.203 kb on + strand, within MPMX20_00289 at 309.203 kb on + strand, within MPMX20_00289 at 309.213 kb on + strand, within MPMX20_00289 at 309.256 kb on - strand at 309.258 kb on - strand at 309.318 kb on + strand at 309.371 kb on - strand at 309.389 kb on - strand at 309.408 kb on - strand at 309.411 kb on + strand at 309.421 kb on + strand at 309.429 kb on - strand, within MPMX20_00290 at 309.461 kb on + strand, within MPMX20_00290 at 309.479 kb on - strand, within MPMX20_00290 at 309.505 kb on - strand, within MPMX20_00290 at 309.561 kb on + strand, within MPMX20_00290 at 309.563 kb on - strand, within MPMX20_00290 at 309.574 kb on - strand, within MPMX20_00290 at 309.579 kb on + strand, within MPMX20_00290 at 309.584 kb on + strand, within MPMX20_00290 at 309.584 kb on + strand, within MPMX20_00290 at 309.584 kb on + strand, within MPMX20_00290 at 309.592 kb on - strand, within MPMX20_00290 at 309.592 kb on - strand, within MPMX20_00290 at 309.656 kb on + strand, within MPMX20_00290 at 309.665 kb on + strand, within MPMX20_00290 at 309.666 kb on - strand, within MPMX20_00290 at 309.678 kb on + strand at 309.713 kb on - strand at 309.713 kb on - strand at 309.754 kb on + strand at 309.762 kb on - strand at 309.799 kb on - strand at 309.799 kb on - strand at 309.799 kb on - strand at 309.845 kb on - strand at 309.851 kb on - strand at 309.862 kb on - strand at 309.901 kb on + strand at 309.937 kb on + strand at 309.949 kb on - strand at 309.949 kb on - strand at 309.954 kb on - strand at 310.010 kb on - strand, within MPMX20_00291 at 310.014 kb on + strand, within MPMX20_00291 at 310.014 kb on + strand, within MPMX20_00291 at 310.019 kb on + strand, within MPMX20_00291 at 310.022 kb on - strand, within MPMX20_00291 at 310.034 kb on - strand, within MPMX20_00291 at 310.174 kb on + strand, within MPMX20_00291 at 310.284 kb on - strand, within MPMX20_00291 at 310.289 kb on - strand, within MPMX20_00291 at 310.401 kb on + strand, within MPMX20_00291 at 310.401 kb on + strand, within MPMX20_00291 at 310.425 kb on - strand, within MPMX20_00291 at 310.425 kb on - strand, within MPMX20_00291 at 310.436 kb on + strand, within MPMX20_00291 at 310.436 kb on + strand, within MPMX20_00291 at 310.436 kb on + strand, within MPMX20_00291 at 310.436 kb on + strand, within MPMX20_00291 at 310.444 kb on - strand, within MPMX20_00291 at 310.458 kb on + strand, within MPMX20_00291 at 310.458 kb on + strand, within MPMX20_00291 at 310.458 kb on + strand, within MPMX20_00291 at 310.458 kb on + strand, within MPMX20_00291 at 310.466 kb on - strand, within MPMX20_00291 at 310.466 kb on - strand, within MPMX20_00291 at 310.466 kb on - strand, within MPMX20_00291 at 310.466 kb on - strand, within MPMX20_00291 at 310.478 kb on - strand, within MPMX20_00291 at 310.494 kb on + strand, within MPMX20_00291 at 310.494 kb on + strand, within MPMX20_00291 at 310.494 kb on + strand, within MPMX20_00291 at 310.494 kb on + strand, within MPMX20_00291 at 310.494 kb on + strand, within MPMX20_00291 at 310.502 kb on - strand, within MPMX20_00291 at 310.502 kb on - strand, within MPMX20_00291 at 310.659 kb on + strand, within MPMX20_00291 at 310.687 kb on - strand, within MPMX20_00291
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 308,428 + MPMX20_00289 0.41 -0.1 308,431 - MPMX20_00289 0.41 -1.1 308,517 + MPMX20_00289 0.47 -0.5 308,529 + MPMX20_00289 0.47 -1.7 308,594 - MPMX20_00289 0.51 -0.1 308,636 + MPMX20_00289 0.54 -0.1 308,662 - MPMX20_00289 0.55 -1.9 308,683 - MPMX20_00289 0.57 +0.1 308,790 - MPMX20_00289 0.63 +3.4 308,798 + MPMX20_00289 0.64 -2.3 308,820 - MPMX20_00289 0.65 -1.2 308,856 + MPMX20_00289 0.67 +0.7 308,917 - MPMX20_00289 0.71 -1.2 308,917 - MPMX20_00289 0.71 -0.0 308,928 + MPMX20_00289 0.72 -1.4 308,952 - MPMX20_00289 0.73 -1.0 308,952 - MPMX20_00289 0.73 -1.6 308,970 + MPMX20_00289 0.74 -2.8 308,970 + MPMX20_00289 0.74 -0.9 309,009 + MPMX20_00289 0.76 -1.7 309,058 + MPMX20_00289 0.79 -1.8 309,066 - MPMX20_00289 0.80 -0.9 309,099 - MPMX20_00289 0.82 -1.2 309,104 + MPMX20_00289 0.82 +3.4 309,104 + MPMX20_00289 0.82 -2.2 309,104 + MPMX20_00289 0.82 -0.6 309,104 + MPMX20_00289 0.82 +0.1 309,111 - MPMX20_00289 0.83 +0.2 309,111 - MPMX20_00289 0.83 -2.0 309,112 - MPMX20_00289 0.83 -1.3 309,112 - MPMX20_00289 0.83 +0.1 309,112 - MPMX20_00289 0.83 -0.3 309,112 - MPMX20_00289 0.83 +0.7 309,112 - MPMX20_00289 0.83 -1.6 309,203 + MPMX20_00289 0.88 -0.6 309,203 + MPMX20_00289 0.88 -2.5 309,213 + MPMX20_00289 0.89 -1.2 309,256 - +2.7 309,258 - +1.0 309,318 + -0.7 309,371 - -0.8 309,389 - -0.1 309,408 - -0.1 309,411 + -2.5 309,421 + +2.7 309,429 - MPMX20_00290 0.11 -2.2 309,461 + MPMX20_00290 0.22 -1.7 309,479 - MPMX20_00290 0.27 -3.7 309,505 - MPMX20_00290 0.36 +2.1 309,561 + MPMX20_00290 0.53 -0.0 309,563 - MPMX20_00290 0.54 +0.0 309,574 - MPMX20_00290 0.57 +0.1 309,579 + MPMX20_00290 0.59 -1.0 309,584 + MPMX20_00290 0.61 +0.4 309,584 + MPMX20_00290 0.61 -0.8 309,584 + MPMX20_00290 0.61 -1.6 309,592 - MPMX20_00290 0.63 -1.3 309,592 - MPMX20_00290 0.63 -0.8 309,656 + MPMX20_00290 0.83 -0.6 309,665 + MPMX20_00290 0.86 -1.3 309,666 - MPMX20_00290 0.87 -2.2 309,678 + -0.2 309,713 - +0.4 309,713 - -2.4 309,754 + +0.1 309,762 - -1.6 309,799 - -1.2 309,799 - +0.7 309,799 - -1.7 309,845 - +0.6 309,851 - -0.1 309,862 - -1.4 309,901 + -1.1 309,937 + -1.1 309,949 - -0.5 309,949 - -1.7 309,954 - +1.1 310,010 - MPMX20_00291 0.12 -0.5 310,014 + MPMX20_00291 0.12 +1.7 310,014 + MPMX20_00291 0.12 -2.8 310,019 + MPMX20_00291 0.12 -1.1 310,022 - MPMX20_00291 0.12 -0.6 310,034 - MPMX20_00291 0.13 +0.7 310,174 + MPMX20_00291 0.20 -2.1 310,284 - MPMX20_00291 0.26 -0.9 310,289 - MPMX20_00291 0.26 +0.4 310,401 + MPMX20_00291 0.32 -0.7 310,401 + MPMX20_00291 0.32 +0.1 310,425 - MPMX20_00291 0.33 -1.1 310,425 - MPMX20_00291 0.33 -2.6 310,436 + MPMX20_00291 0.34 +1.7 310,436 + MPMX20_00291 0.34 -0.3 310,436 + MPMX20_00291 0.34 -1.5 310,436 + MPMX20_00291 0.34 +0.1 310,444 - MPMX20_00291 0.34 -1.8 310,458 + MPMX20_00291 0.35 -1.0 310,458 + MPMX20_00291 0.35 -1.8 310,458 + MPMX20_00291 0.35 -1.2 310,458 + MPMX20_00291 0.35 -0.6 310,466 - MPMX20_00291 0.35 +2.7 310,466 - MPMX20_00291 0.35 +0.4 310,466 - MPMX20_00291 0.35 -0.8 310,466 - MPMX20_00291 0.35 -1.8 310,478 - MPMX20_00291 0.36 -0.8 310,494 + MPMX20_00291 0.37 -0.8 310,494 + MPMX20_00291 0.37 -0.1 310,494 + MPMX20_00291 0.37 -1.5 310,494 + MPMX20_00291 0.37 -0.5 310,494 + MPMX20_00291 0.37 -0.4 310,502 - MPMX20_00291 0.37 +0.6 310,502 - MPMX20_00291 0.37 +0.1 310,659 + MPMX20_00291 0.45 -1.0 310,687 - MPMX20_00291 0.46 -1.4
Or see this region's nucleotide sequence