Experiment: M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04312 and MPMX20_04313 are separated by 17 nucleotides MPMX20_04313 and MPMX20_04314 overlap by 4 nucleotides
MPMX20_04312: MPMX20_04312 - Glucose-1-phosphate adenylyltransferase, at 4,503,876 to 4,505,171
_04312
MPMX20_04313: MPMX20_04313 - Glycogen debranching enzyme, at 4,505,189 to 4,507,162
_04313
MPMX20_04314: MPMX20_04314 - 1,4-alpha-glucan branching enzyme GlgB, at 4,507,159 to 4,509,345
_04314
Position (kb)
4505
4506
4507
4508 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 4504.217 kb on - strand, within MPMX20_04312 at 4504.273 kb on + strand, within MPMX20_04312 at 4504.303 kb on + strand, within MPMX20_04312 at 4504.317 kb on - strand, within MPMX20_04312 at 4504.327 kb on + strand, within MPMX20_04312 at 4504.379 kb on + strand, within MPMX20_04312 at 4504.382 kb on - strand, within MPMX20_04312 at 4504.386 kb on + strand, within MPMX20_04312 at 4504.394 kb on + strand, within MPMX20_04312 at 4504.394 kb on - strand, within MPMX20_04312 at 4504.403 kb on - strand, within MPMX20_04312 at 4504.486 kb on + strand, within MPMX20_04312 at 4504.486 kb on + strand, within MPMX20_04312 at 4504.494 kb on - strand, within MPMX20_04312 at 4504.715 kb on + strand, within MPMX20_04312 at 4504.726 kb on - strand, within MPMX20_04312 at 4504.927 kb on - strand, within MPMX20_04312 at 4504.928 kb on + strand, within MPMX20_04312 at 4504.942 kb on + strand, within MPMX20_04312 at 4504.986 kb on - strand, within MPMX20_04312 at 4504.990 kb on + strand, within MPMX20_04312 at 4504.992 kb on + strand, within MPMX20_04312 at 4505.047 kb on - strand at 4505.156 kb on + strand at 4505.449 kb on + strand, within MPMX20_04313 at 4505.449 kb on + strand, within MPMX20_04313 at 4505.498 kb on + strand, within MPMX20_04313 at 4505.501 kb on - strand, within MPMX20_04313 at 4505.508 kb on + strand, within MPMX20_04313 at 4505.508 kb on + strand, within MPMX20_04313 at 4505.516 kb on - strand, within MPMX20_04313 at 4505.539 kb on - strand, within MPMX20_04313 at 4505.550 kb on + strand, within MPMX20_04313 at 4505.599 kb on - strand, within MPMX20_04313 at 4505.627 kb on - strand, within MPMX20_04313 at 4505.642 kb on - strand, within MPMX20_04313 at 4505.666 kb on - strand, within MPMX20_04313 at 4505.668 kb on + strand, within MPMX20_04313 at 4505.701 kb on + strand, within MPMX20_04313 at 4505.701 kb on + strand, within MPMX20_04313 at 4505.709 kb on - strand, within MPMX20_04313 at 4505.709 kb on - strand, within MPMX20_04313 at 4505.709 kb on - strand, within MPMX20_04313 at 4505.709 kb on - strand, within MPMX20_04313 at 4505.722 kb on - strand, within MPMX20_04313 at 4505.722 kb on - strand, within MPMX20_04313 at 4505.824 kb on - strand, within MPMX20_04313 at 4506.062 kb on - strand, within MPMX20_04313 at 4506.074 kb on - strand, within MPMX20_04313 at 4506.145 kb on - strand, within MPMX20_04313 at 4506.197 kb on - strand, within MPMX20_04313 at 4506.197 kb on - strand, within MPMX20_04313 at 4506.239 kb on - strand, within MPMX20_04313 at 4506.334 kb on + strand, within MPMX20_04313 at 4506.449 kb on + strand, within MPMX20_04313 at 4506.449 kb on + strand, within MPMX20_04313 at 4506.454 kb on + strand, within MPMX20_04313 at 4506.470 kb on - strand, within MPMX20_04313 at 4506.504 kb on + strand, within MPMX20_04313 at 4506.563 kb on + strand, within MPMX20_04313 at 4506.585 kb on + strand, within MPMX20_04313 at 4506.603 kb on - strand, within MPMX20_04313 at 4506.630 kb on + strand, within MPMX20_04313 at 4506.631 kb on + strand, within MPMX20_04313 at 4506.631 kb on + strand, within MPMX20_04313 at 4506.639 kb on - strand, within MPMX20_04313 at 4506.677 kb on + strand, within MPMX20_04313 at 4506.716 kb on + strand, within MPMX20_04313 at 4506.724 kb on - strand, within MPMX20_04313 at 4506.733 kb on + strand, within MPMX20_04313 at 4506.741 kb on - strand, within MPMX20_04313 at 4506.798 kb on - strand, within MPMX20_04313 at 4506.816 kb on - strand, within MPMX20_04313 at 4506.901 kb on + strand, within MPMX20_04313 at 4506.901 kb on + strand, within MPMX20_04313 at 4506.909 kb on - strand, within MPMX20_04313 at 4507.032 kb on + strand at 4507.038 kb on - strand at 4507.040 kb on - strand at 4507.066 kb on - strand at 4507.068 kb on - strand at 4507.079 kb on + strand at 4507.130 kb on - strand at 4507.146 kb on + strand at 4507.146 kb on + strand at 4507.187 kb on - strand at 4507.203 kb on + strand at 4507.258 kb on - strand at 4507.272 kb on - strand at 4507.330 kb on + strand at 4507.343 kb on - strand at 4507.370 kb on + strand at 4507.378 kb on - strand, within MPMX20_04314 at 4507.406 kb on + strand, within MPMX20_04314 at 4507.413 kb on - strand, within MPMX20_04314 at 4507.451 kb on + strand, within MPMX20_04314 at 4507.455 kb on + strand, within MPMX20_04314 at 4507.502 kb on + strand, within MPMX20_04314 at 4507.502 kb on + strand, within MPMX20_04314 at 4507.538 kb on + strand, within MPMX20_04314 at 4507.553 kb on - strand, within MPMX20_04314 at 4507.571 kb on + strand, within MPMX20_04314 at 4507.603 kb on - strand, within MPMX20_04314 at 4507.812 kb on - strand, within MPMX20_04314 at 4507.812 kb on - strand, within MPMX20_04314 at 4507.815 kb on + strand, within MPMX20_04314 at 4507.823 kb on - strand, within MPMX20_04314 at 4507.823 kb on - strand, within MPMX20_04314 at 4507.823 kb on - strand, within MPMX20_04314 at 4507.835 kb on + strand, within MPMX20_04314 at 4507.889 kb on + strand, within MPMX20_04314 at 4507.907 kb on - strand, within MPMX20_04314 at 4507.948 kb on - strand, within MPMX20_04314 at 4507.958 kb on - strand, within MPMX20_04314 at 4507.991 kb on + strand, within MPMX20_04314 at 4508.018 kb on - strand, within MPMX20_04314 at 4508.021 kb on + strand, within MPMX20_04314 at 4508.142 kb on + strand, within MPMX20_04314 at 4508.150 kb on - strand, within MPMX20_04314 at 4508.160 kb on + strand, within MPMX20_04314
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,504,217 - MPMX20_04312 0.26 -1.1 4,504,273 + MPMX20_04312 0.31 +1.1 4,504,303 + MPMX20_04312 0.33 +0.6 4,504,317 - MPMX20_04312 0.34 -2.5 4,504,327 + MPMX20_04312 0.35 -0.8 4,504,379 + MPMX20_04312 0.39 -1.5 4,504,382 - MPMX20_04312 0.39 +2.0 4,504,386 + MPMX20_04312 0.39 +0.6 4,504,394 + MPMX20_04312 0.40 -0.2 4,504,394 - MPMX20_04312 0.40 +3.1 4,504,403 - MPMX20_04312 0.41 +3.0 4,504,486 + MPMX20_04312 0.47 +0.1 4,504,486 + MPMX20_04312 0.47 +1.4 4,504,494 - MPMX20_04312 0.48 +0.7 4,504,715 + MPMX20_04312 0.65 +1.0 4,504,726 - MPMX20_04312 0.66 -2.2 4,504,927 - MPMX20_04312 0.81 -1.2 4,504,928 + MPMX20_04312 0.81 +3.0 4,504,942 + MPMX20_04312 0.82 +4.9 4,504,986 - MPMX20_04312 0.86 +0.2 4,504,990 + MPMX20_04312 0.86 +0.5 4,504,992 + MPMX20_04312 0.86 +1.6 4,505,047 - -0.3 4,505,156 + +1.4 4,505,449 + MPMX20_04313 0.13 +0.6 4,505,449 + MPMX20_04313 0.13 +0.1 4,505,498 + MPMX20_04313 0.16 -0.4 4,505,501 - MPMX20_04313 0.16 +1.2 4,505,508 + MPMX20_04313 0.16 -0.1 4,505,508 + MPMX20_04313 0.16 -2.0 4,505,516 - MPMX20_04313 0.17 +0.5 4,505,539 - MPMX20_04313 0.18 +0.2 4,505,550 + MPMX20_04313 0.18 +0.9 4,505,599 - MPMX20_04313 0.21 -1.6 4,505,627 - MPMX20_04313 0.22 -1.2 4,505,642 - MPMX20_04313 0.23 +0.6 4,505,666 - MPMX20_04313 0.24 +0.6 4,505,668 + MPMX20_04313 0.24 +1.6 4,505,701 + MPMX20_04313 0.26 +0.2 4,505,701 + MPMX20_04313 0.26 -0.7 4,505,709 - MPMX20_04313 0.26 +0.3 4,505,709 - MPMX20_04313 0.26 +3.0 4,505,709 - MPMX20_04313 0.26 -0.9 4,505,709 - MPMX20_04313 0.26 +1.4 4,505,722 - MPMX20_04313 0.27 +2.0 4,505,722 - MPMX20_04313 0.27 -0.9 4,505,824 - MPMX20_04313 0.32 -0.5 4,506,062 - MPMX20_04313 0.44 +1.0 4,506,074 - MPMX20_04313 0.45 +3.6 4,506,145 - MPMX20_04313 0.48 -1.3 4,506,197 - MPMX20_04313 0.51 +3.0 4,506,197 - MPMX20_04313 0.51 -0.5 4,506,239 - MPMX20_04313 0.53 -0.8 4,506,334 + MPMX20_04313 0.58 +0.1 4,506,449 + MPMX20_04313 0.64 -0.2 4,506,449 + MPMX20_04313 0.64 -0.4 4,506,454 + MPMX20_04313 0.64 +0.9 4,506,470 - MPMX20_04313 0.65 +2.0 4,506,504 + MPMX20_04313 0.67 +0.5 4,506,563 + MPMX20_04313 0.70 -1.8 4,506,585 + MPMX20_04313 0.71 -0.9 4,506,603 - MPMX20_04313 0.72 -0.7 4,506,630 + MPMX20_04313 0.73 -0.6 4,506,631 + MPMX20_04313 0.73 +0.2 4,506,631 + MPMX20_04313 0.73 -0.8 4,506,639 - MPMX20_04313 0.73 +2.0 4,506,677 + MPMX20_04313 0.75 +2.0 4,506,716 + MPMX20_04313 0.77 -0.8 4,506,724 - MPMX20_04313 0.78 -2.0 4,506,733 + MPMX20_04313 0.78 +0.6 4,506,741 - MPMX20_04313 0.79 +0.1 4,506,798 - MPMX20_04313 0.82 +1.4 4,506,816 - MPMX20_04313 0.82 -1.6 4,506,901 + MPMX20_04313 0.87 -0.2 4,506,901 + MPMX20_04313 0.87 -1.5 4,506,909 - MPMX20_04313 0.87 +1.0 4,507,032 + -1.2 4,507,038 - -1.7 4,507,040 - +0.2 4,507,066 - -0.7 4,507,068 - -0.6 4,507,079 + -1.2 4,507,130 - +2.0 4,507,146 + +0.5 4,507,146 + -1.6 4,507,187 - +1.0 4,507,203 + -0.3 4,507,258 - -1.2 4,507,272 - +0.4 4,507,330 + -1.9 4,507,343 - +3.0 4,507,370 + +4.5 4,507,378 - MPMX20_04314 0.10 -0.8 4,507,406 + MPMX20_04314 0.11 +1.5 4,507,413 - MPMX20_04314 0.12 +2.0 4,507,451 + MPMX20_04314 0.13 +0.2 4,507,455 + MPMX20_04314 0.14 -0.2 4,507,502 + MPMX20_04314 0.16 -2.2 4,507,502 + MPMX20_04314 0.16 -0.8 4,507,538 + MPMX20_04314 0.17 -2.4 4,507,553 - MPMX20_04314 0.18 +3.0 4,507,571 + MPMX20_04314 0.19 -0.0 4,507,603 - MPMX20_04314 0.20 -0.9 4,507,812 - MPMX20_04314 0.30 -1.0 4,507,812 - MPMX20_04314 0.30 +0.4 4,507,815 + MPMX20_04314 0.30 +2.0 4,507,823 - MPMX20_04314 0.30 +2.0 4,507,823 - MPMX20_04314 0.30 -0.5 4,507,823 - MPMX20_04314 0.30 -0.0 4,507,835 + MPMX20_04314 0.31 -0.4 4,507,889 + MPMX20_04314 0.33 -0.7 4,507,907 - MPMX20_04314 0.34 -1.1 4,507,948 - MPMX20_04314 0.36 +2.5 4,507,958 - MPMX20_04314 0.37 +1.4 4,507,991 + MPMX20_04314 0.38 -0.8 4,508,018 - MPMX20_04314 0.39 -1.6 4,508,021 + MPMX20_04314 0.39 +2.0 4,508,142 + MPMX20_04314 0.45 +1.1 4,508,150 - MPMX20_04314 0.45 +1.0 4,508,160 + MPMX20_04314 0.46 -1.0
Or see this region's nucleotide sequence