Experiment: M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03637 and MPMX20_03638 are separated by 9 nucleotides MPMX20_03638 and MPMX20_03639 are separated by 9 nucleotides
MPMX20_03637: MPMX20_03637 - Sulfate adenylyltransferase subunit 1, at 3,823,690 to 3,825,114
_03637
MPMX20_03638: MPMX20_03638 - Sulfate adenylyltransferase subunit 2, at 3,825,124 to 3,826,032
_03638
MPMX20_03639: MPMX20_03639 - Siroheme synthase, at 3,826,042 to 3,827,400
_03639
Position (kb)
3825
3826
3827 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3824.194 kb on + strand, within MPMX20_03637 at 3824.277 kb on - strand, within MPMX20_03637 at 3824.394 kb on - strand, within MPMX20_03637 at 3824.431 kb on - strand, within MPMX20_03637 at 3824.441 kb on - strand, within MPMX20_03637 at 3824.441 kb on - strand, within MPMX20_03637 at 3824.631 kb on - strand, within MPMX20_03637 at 3824.670 kb on - strand, within MPMX20_03637 at 3824.753 kb on - strand, within MPMX20_03637 at 3824.760 kb on + strand, within MPMX20_03637 at 3824.797 kb on + strand, within MPMX20_03637 at 3824.920 kb on - strand, within MPMX20_03637 at 3824.933 kb on + strand, within MPMX20_03637 at 3824.941 kb on - strand, within MPMX20_03637 at 3825.014 kb on + strand at 3825.014 kb on + strand at 3825.027 kb on - strand at 3825.027 kb on - strand at 3825.161 kb on - strand at 3825.258 kb on + strand, within MPMX20_03638 at 3825.266 kb on - strand, within MPMX20_03638 at 3825.276 kb on - strand, within MPMX20_03638 at 3825.295 kb on + strand, within MPMX20_03638 at 3825.379 kb on + strand, within MPMX20_03638 at 3825.387 kb on - strand, within MPMX20_03638 at 3825.387 kb on - strand, within MPMX20_03638 at 3825.387 kb on - strand, within MPMX20_03638 at 3825.387 kb on - strand, within MPMX20_03638 at 3825.534 kb on + strand, within MPMX20_03638 at 3825.542 kb on - strand, within MPMX20_03638 at 3825.592 kb on - strand, within MPMX20_03638 at 3825.642 kb on - strand, within MPMX20_03638 at 3825.642 kb on - strand, within MPMX20_03638 at 3825.642 kb on - strand, within MPMX20_03638 at 3825.642 kb on - strand, within MPMX20_03638 at 3825.673 kb on + strand, within MPMX20_03638 at 3825.686 kb on - strand, within MPMX20_03638 at 3825.686 kb on - strand, within MPMX20_03638 at 3825.715 kb on + strand, within MPMX20_03638 at 3825.715 kb on + strand, within MPMX20_03638 at 3825.729 kb on + strand, within MPMX20_03638 at 3825.729 kb on + strand, within MPMX20_03638 at 3825.737 kb on - strand, within MPMX20_03638 at 3825.737 kb on - strand, within MPMX20_03638 at 3825.741 kb on + strand, within MPMX20_03638 at 3825.741 kb on + strand, within MPMX20_03638 at 3825.741 kb on + strand, within MPMX20_03638 at 3825.781 kb on + strand, within MPMX20_03638 at 3825.789 kb on - strand, within MPMX20_03638 at 3825.847 kb on - strand, within MPMX20_03638 at 3825.898 kb on + strand, within MPMX20_03638 at 3825.898 kb on + strand, within MPMX20_03638 at 3825.898 kb on + strand, within MPMX20_03638 at 3825.909 kb on + strand, within MPMX20_03638 at 3826.003 kb on + strand at 3826.065 kb on + strand at 3826.066 kb on + strand at 3826.082 kb on - strand at 3826.085 kb on + strand at 3826.257 kb on + strand, within MPMX20_03639 at 3826.265 kb on - strand, within MPMX20_03639 at 3826.278 kb on + strand, within MPMX20_03639 at 3826.378 kb on - strand, within MPMX20_03639 at 3826.455 kb on - strand, within MPMX20_03639 at 3826.484 kb on + strand, within MPMX20_03639 at 3826.492 kb on - strand, within MPMX20_03639 at 3826.524 kb on + strand, within MPMX20_03639 at 3826.559 kb on + strand, within MPMX20_03639 at 3826.559 kb on + strand, within MPMX20_03639 at 3826.567 kb on - strand, within MPMX20_03639 at 3826.567 kb on - strand, within MPMX20_03639 at 3826.567 kb on - strand, within MPMX20_03639 at 3826.636 kb on + strand, within MPMX20_03639 at 3826.636 kb on + strand, within MPMX20_03639 at 3826.663 kb on + strand, within MPMX20_03639 at 3826.698 kb on + strand, within MPMX20_03639 at 3826.778 kb on + strand, within MPMX20_03639 at 3826.781 kb on - strand, within MPMX20_03639 at 3826.788 kb on + strand, within MPMX20_03639 at 3826.796 kb on - strand, within MPMX20_03639 at 3826.829 kb on + strand, within MPMX20_03639 at 3826.837 kb on - strand, within MPMX20_03639 at 3826.948 kb on + strand, within MPMX20_03639 at 3826.956 kb on - strand, within MPMX20_03639 at 3826.956 kb on - strand, within MPMX20_03639
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,824,194 + MPMX20_03637 0.35 -1.2 3,824,277 - MPMX20_03637 0.41 -0.3 3,824,394 - MPMX20_03637 0.49 +0.1 3,824,431 - MPMX20_03637 0.52 -3.3 3,824,441 - MPMX20_03637 0.53 +0.3 3,824,441 - MPMX20_03637 0.53 +0.6 3,824,631 - MPMX20_03637 0.66 +0.3 3,824,670 - MPMX20_03637 0.69 +0.3 3,824,753 - MPMX20_03637 0.75 -1.2 3,824,760 + MPMX20_03637 0.75 -0.6 3,824,797 + MPMX20_03637 0.78 -3.2 3,824,920 - MPMX20_03637 0.86 -0.7 3,824,933 + MPMX20_03637 0.87 +0.9 3,824,941 - MPMX20_03637 0.88 -0.3 3,825,014 + -1.9 3,825,014 + -0.1 3,825,027 - -1.4 3,825,027 - -1.9 3,825,161 - +1.9 3,825,258 + MPMX20_03638 0.15 -2.6 3,825,266 - MPMX20_03638 0.16 -0.3 3,825,276 - MPMX20_03638 0.17 -0.5 3,825,295 + MPMX20_03638 0.19 -1.3 3,825,379 + MPMX20_03638 0.28 -2.6 3,825,387 - MPMX20_03638 0.29 -2.1 3,825,387 - MPMX20_03638 0.29 -2.3 3,825,387 - MPMX20_03638 0.29 +0.6 3,825,387 - MPMX20_03638 0.29 -1.7 3,825,534 + MPMX20_03638 0.45 -0.6 3,825,542 - MPMX20_03638 0.46 +2.9 3,825,592 - MPMX20_03638 0.51 -1.4 3,825,642 - MPMX20_03638 0.57 -1.2 3,825,642 - MPMX20_03638 0.57 -2.3 3,825,642 - MPMX20_03638 0.57 -1.4 3,825,642 - MPMX20_03638 0.57 +0.6 3,825,673 + MPMX20_03638 0.60 -1.7 3,825,686 - MPMX20_03638 0.62 +0.3 3,825,686 - MPMX20_03638 0.62 -0.9 3,825,715 + MPMX20_03638 0.65 -2.6 3,825,715 + MPMX20_03638 0.65 -2.1 3,825,729 + MPMX20_03638 0.67 -0.3 3,825,729 + MPMX20_03638 0.67 +0.9 3,825,737 - MPMX20_03638 0.67 -1.2 3,825,737 - MPMX20_03638 0.67 -1.9 3,825,741 + MPMX20_03638 0.68 +0.2 3,825,741 + MPMX20_03638 0.68 +0.3 3,825,741 + MPMX20_03638 0.68 -3.1 3,825,781 + MPMX20_03638 0.72 -1.9 3,825,789 - MPMX20_03638 0.73 -1.5 3,825,847 - MPMX20_03638 0.80 -0.3 3,825,898 + MPMX20_03638 0.85 -0.7 3,825,898 + MPMX20_03638 0.85 -1.6 3,825,898 + MPMX20_03638 0.85 +0.3 3,825,909 + MPMX20_03638 0.86 -0.3 3,826,003 + -1.6 3,826,065 + -1.7 3,826,066 + +0.9 3,826,082 - +0.1 3,826,085 + +1.9 3,826,257 + MPMX20_03639 0.16 +0.7 3,826,265 - MPMX20_03639 0.16 -2.2 3,826,278 + MPMX20_03639 0.17 -1.1 3,826,378 - MPMX20_03639 0.25 +0.9 3,826,455 - MPMX20_03639 0.30 -1.4 3,826,484 + MPMX20_03639 0.33 -2.1 3,826,492 - MPMX20_03639 0.33 +0.6 3,826,524 + MPMX20_03639 0.35 +0.9 3,826,559 + MPMX20_03639 0.38 +0.6 3,826,559 + MPMX20_03639 0.38 +0.7 3,826,567 - MPMX20_03639 0.39 +0.5 3,826,567 - MPMX20_03639 0.39 -0.3 3,826,567 - MPMX20_03639 0.39 -0.5 3,826,636 + MPMX20_03639 0.44 -0.6 3,826,636 + MPMX20_03639 0.44 -0.4 3,826,663 + MPMX20_03639 0.46 +0.1 3,826,698 + MPMX20_03639 0.48 -0.3 3,826,778 + MPMX20_03639 0.54 -0.5 3,826,781 - MPMX20_03639 0.54 -0.9 3,826,788 + MPMX20_03639 0.55 -2.4 3,826,796 - MPMX20_03639 0.55 +0.3 3,826,829 + MPMX20_03639 0.58 +0.3 3,826,837 - MPMX20_03639 0.58 -0.5 3,826,948 + MPMX20_03639 0.67 -0.1 3,826,956 - MPMX20_03639 0.67 -0.7 3,826,956 - MPMX20_03639 0.67 -1.1
Or see this region's nucleotide sequence