Experiment: M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02425 and MPMX20_02426 are separated by 82 nucleotides MPMX20_02426 and MPMX20_02427 are separated by 394 nucleotides
MPMX20_02425: MPMX20_02425 - HTH-type transcriptional regulator NorG, at 2,562,989 to 2,564,398
_02425
MPMX20_02426: MPMX20_02426 - Protein YnfQ, at 2,564,481 to 2,564,669
_02426
MPMX20_02427: MPMX20_02427 - hypothetical protein, at 2,565,064 to 2,566,464
_02427
Position (kb)
2564
2565 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2563.481 kb on - strand, within MPMX20_02425 at 2563.489 kb on - strand, within MPMX20_02425 at 2563.516 kb on - strand, within MPMX20_02425 at 2563.526 kb on - strand, within MPMX20_02425 at 2563.571 kb on - strand, within MPMX20_02425 at 2563.573 kb on + strand, within MPMX20_02425 at 2563.573 kb on + strand, within MPMX20_02425 at 2563.573 kb on + strand, within MPMX20_02425 at 2563.581 kb on - strand, within MPMX20_02425 at 2563.581 kb on - strand, within MPMX20_02425 at 2563.581 kb on - strand, within MPMX20_02425 at 2563.630 kb on + strand, within MPMX20_02425 at 2563.637 kb on + strand, within MPMX20_02425 at 2563.638 kb on - strand, within MPMX20_02425 at 2563.653 kb on - strand, within MPMX20_02425 at 2563.702 kb on + strand, within MPMX20_02425 at 2563.797 kb on + strand, within MPMX20_02425 at 2563.834 kb on + strand, within MPMX20_02425 at 2563.873 kb on + strand, within MPMX20_02425 at 2563.929 kb on - strand, within MPMX20_02425 at 2563.951 kb on + strand, within MPMX20_02425 at 2563.951 kb on + strand, within MPMX20_02425 at 2563.956 kb on + strand, within MPMX20_02425 at 2563.959 kb on - strand, within MPMX20_02425 at 2564.033 kb on - strand, within MPMX20_02425 at 2564.071 kb on + strand, within MPMX20_02425 at 2564.178 kb on - strand, within MPMX20_02425 at 2564.197 kb on + strand, within MPMX20_02425 at 2564.204 kb on + strand, within MPMX20_02425 at 2564.205 kb on - strand, within MPMX20_02425 at 2564.244 kb on - strand, within MPMX20_02425 at 2564.316 kb on - strand at 2564.331 kb on - strand at 2564.344 kb on + strand at 2564.421 kb on + strand at 2564.421 kb on + strand at 2564.421 kb on + strand at 2564.432 kb on - strand at 2564.459 kb on + strand at 2564.467 kb on - strand at 2564.467 kb on - strand at 2564.500 kb on - strand, within MPMX20_02426 at 2564.508 kb on - strand, within MPMX20_02426 at 2564.518 kb on - strand, within MPMX20_02426 at 2564.534 kb on - strand, within MPMX20_02426 at 2564.600 kb on + strand, within MPMX20_02426 at 2564.600 kb on + strand, within MPMX20_02426 at 2564.608 kb on - strand, within MPMX20_02426 at 2564.609 kb on - strand, within MPMX20_02426 at 2564.614 kb on + strand, within MPMX20_02426 at 2564.627 kb on + strand, within MPMX20_02426 at 2564.629 kb on + strand, within MPMX20_02426 at 2564.629 kb on + strand, within MPMX20_02426 at 2564.637 kb on - strand, within MPMX20_02426 at 2564.637 kb on - strand, within MPMX20_02426 at 2564.641 kb on + strand, within MPMX20_02426 at 2564.727 kb on - strand at 2564.729 kb on - strand at 2564.781 kb on + strand at 2564.783 kb on - strand at 2564.844 kb on - strand at 2564.951 kb on - strand at 2565.035 kb on - strand at 2565.049 kb on + strand at 2565.058 kb on - strand at 2565.058 kb on - strand at 2565.058 kb on - strand at 2565.066 kb on + strand at 2565.080 kb on + strand at 2565.112 kb on + strand at 2565.164 kb on + strand at 2565.172 kb on + strand at 2565.172 kb on - strand at 2565.174 kb on + strand at 2565.282 kb on + strand, within MPMX20_02427 at 2565.282 kb on + strand, within MPMX20_02427 at 2565.282 kb on + strand, within MPMX20_02427 at 2565.282 kb on + strand, within MPMX20_02427 at 2565.282 kb on + strand, within MPMX20_02427 at 2565.290 kb on - strand, within MPMX20_02427 at 2565.290 kb on - strand, within MPMX20_02427 at 2565.290 kb on - strand, within MPMX20_02427 at 2565.290 kb on - strand, within MPMX20_02427 at 2565.297 kb on + strand, within MPMX20_02427 at 2565.297 kb on - strand, within MPMX20_02427 at 2565.346 kb on - strand, within MPMX20_02427 at 2565.352 kb on + strand, within MPMX20_02427 at 2565.360 kb on - strand, within MPMX20_02427 at 2565.367 kb on - strand, within MPMX20_02427 at 2565.404 kb on + strand, within MPMX20_02427 at 2565.404 kb on + strand, within MPMX20_02427 at 2565.404 kb on + strand, within MPMX20_02427 at 2565.404 kb on + strand, within MPMX20_02427 at 2565.404 kb on + strand, within MPMX20_02427 at 2565.412 kb on - strand, within MPMX20_02427 at 2565.447 kb on - strand, within MPMX20_02427 at 2565.447 kb on - strand, within MPMX20_02427 at 2565.466 kb on - strand, within MPMX20_02427 at 2565.466 kb on - strand, within MPMX20_02427 at 2565.487 kb on - strand, within MPMX20_02427 at 2565.523 kb on - strand, within MPMX20_02427 at 2565.523 kb on - strand, within MPMX20_02427 at 2565.529 kb on + strand, within MPMX20_02427 at 2565.529 kb on + strand, within MPMX20_02427 at 2565.537 kb on - strand, within MPMX20_02427 at 2565.583 kb on - strand, within MPMX20_02427 at 2565.588 kb on + strand, within MPMX20_02427 at 2565.594 kb on - strand, within MPMX20_02427
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,563,481 - MPMX20_02425 0.35 -0.8 2,563,489 - MPMX20_02425 0.35 -0.0 2,563,516 - MPMX20_02425 0.37 -0.9 2,563,526 - MPMX20_02425 0.38 +1.6 2,563,571 - MPMX20_02425 0.41 -0.5 2,563,573 + MPMX20_02425 0.41 -0.2 2,563,573 + MPMX20_02425 0.41 +0.4 2,563,573 + MPMX20_02425 0.41 -0.8 2,563,581 - MPMX20_02425 0.42 -1.5 2,563,581 - MPMX20_02425 0.42 -0.5 2,563,581 - MPMX20_02425 0.42 -0.6 2,563,630 + MPMX20_02425 0.45 -0.9 2,563,637 + MPMX20_02425 0.46 -0.1 2,563,638 - MPMX20_02425 0.46 -0.8 2,563,653 - MPMX20_02425 0.47 -0.9 2,563,702 + MPMX20_02425 0.51 +1.1 2,563,797 + MPMX20_02425 0.57 +0.8 2,563,834 + MPMX20_02425 0.60 -0.1 2,563,873 + MPMX20_02425 0.63 -1.0 2,563,929 - MPMX20_02425 0.67 -1.1 2,563,951 + MPMX20_02425 0.68 -0.7 2,563,951 + MPMX20_02425 0.68 +0.2 2,563,956 + MPMX20_02425 0.69 -1.2 2,563,959 - MPMX20_02425 0.69 -0.4 2,564,033 - MPMX20_02425 0.74 -0.0 2,564,071 + MPMX20_02425 0.77 -0.7 2,564,178 - MPMX20_02425 0.84 +0.5 2,564,197 + MPMX20_02425 0.86 +0.1 2,564,204 + MPMX20_02425 0.86 -0.4 2,564,205 - MPMX20_02425 0.86 +0.1 2,564,244 - MPMX20_02425 0.89 +0.0 2,564,316 - -1.0 2,564,331 - -0.5 2,564,344 + +0.6 2,564,421 + -1.7 2,564,421 + +1.6 2,564,421 + -0.7 2,564,432 - +1.2 2,564,459 + -0.9 2,564,467 - +0.2 2,564,467 - +0.5 2,564,500 - MPMX20_02426 0.10 -1.9 2,564,508 - MPMX20_02426 0.14 -1.2 2,564,518 - MPMX20_02426 0.20 -0.5 2,564,534 - MPMX20_02426 0.28 -1.2 2,564,600 + MPMX20_02426 0.63 -1.1 2,564,600 + MPMX20_02426 0.63 +1.2 2,564,608 - MPMX20_02426 0.67 -0.1 2,564,609 - MPMX20_02426 0.68 +1.2 2,564,614 + MPMX20_02426 0.70 -2.7 2,564,627 + MPMX20_02426 0.77 -1.4 2,564,629 + MPMX20_02426 0.78 -1.6 2,564,629 + MPMX20_02426 0.78 -1.1 2,564,637 - MPMX20_02426 0.83 +0.8 2,564,637 - MPMX20_02426 0.83 -1.4 2,564,641 + MPMX20_02426 0.85 +0.3 2,564,727 - -0.4 2,564,729 - +0.2 2,564,781 + -0.9 2,564,783 - +0.2 2,564,844 - +0.8 2,564,951 - +0.2 2,565,035 - +1.5 2,565,049 + +0.2 2,565,058 - +0.0 2,565,058 - -1.9 2,565,058 - +1.0 2,565,066 + -1.1 2,565,080 + +2.3 2,565,112 + +5.3 2,565,164 + -0.0 2,565,172 + -1.9 2,565,172 - -0.5 2,565,174 + -0.3 2,565,282 + MPMX20_02427 0.16 +0.0 2,565,282 + MPMX20_02427 0.16 -0.5 2,565,282 + MPMX20_02427 0.16 -0.4 2,565,282 + MPMX20_02427 0.16 +0.5 2,565,282 + MPMX20_02427 0.16 -2.0 2,565,290 - MPMX20_02427 0.16 +0.2 2,565,290 - MPMX20_02427 0.16 -0.9 2,565,290 - MPMX20_02427 0.16 -1.7 2,565,290 - MPMX20_02427 0.16 +0.8 2,565,297 + MPMX20_02427 0.17 -1.0 2,565,297 - MPMX20_02427 0.17 -0.7 2,565,346 - MPMX20_02427 0.20 -1.4 2,565,352 + MPMX20_02427 0.21 -1.0 2,565,360 - MPMX20_02427 0.21 -1.8 2,565,367 - MPMX20_02427 0.22 -1.0 2,565,404 + MPMX20_02427 0.24 -2.5 2,565,404 + MPMX20_02427 0.24 -1.2 2,565,404 + MPMX20_02427 0.24 -0.5 2,565,404 + MPMX20_02427 0.24 -0.5 2,565,404 + MPMX20_02427 0.24 -2.7 2,565,412 - MPMX20_02427 0.25 -2.0 2,565,447 - MPMX20_02427 0.27 -0.9 2,565,447 - MPMX20_02427 0.27 -0.8 2,565,466 - MPMX20_02427 0.29 +0.3 2,565,466 - MPMX20_02427 0.29 +0.1 2,565,487 - MPMX20_02427 0.30 +0.5 2,565,523 - MPMX20_02427 0.33 -0.5 2,565,523 - MPMX20_02427 0.33 +1.1 2,565,529 + MPMX20_02427 0.33 +0.1 2,565,529 + MPMX20_02427 0.33 +1.2 2,565,537 - MPMX20_02427 0.34 -0.4 2,565,583 - MPMX20_02427 0.37 -2.1 2,565,588 + MPMX20_02427 0.37 -0.2 2,565,594 - MPMX20_02427 0.38 -0.7
Or see this region's nucleotide sequence