Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02426

Experiment: M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02425 and MPMX20_02426 are separated by 82 nucleotidesMPMX20_02426 and MPMX20_02427 are separated by 394 nucleotides MPMX20_02425: MPMX20_02425 - HTH-type transcriptional regulator NorG, at 2,562,989 to 2,564,398 _02425 MPMX20_02426: MPMX20_02426 - Protein YnfQ, at 2,564,481 to 2,564,669 _02426 MPMX20_02427: MPMX20_02427 - hypothetical protein, at 2,565,064 to 2,566,464 _02427 Position (kb) 2564 2565Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 2563.481 kb on - strand, within MPMX20_02425at 2563.489 kb on - strand, within MPMX20_02425at 2563.516 kb on - strand, within MPMX20_02425at 2563.526 kb on - strand, within MPMX20_02425at 2563.571 kb on - strand, within MPMX20_02425at 2563.573 kb on + strand, within MPMX20_02425at 2563.573 kb on + strand, within MPMX20_02425at 2563.573 kb on + strand, within MPMX20_02425at 2563.581 kb on - strand, within MPMX20_02425at 2563.581 kb on - strand, within MPMX20_02425at 2563.581 kb on - strand, within MPMX20_02425at 2563.630 kb on + strand, within MPMX20_02425at 2563.637 kb on + strand, within MPMX20_02425at 2563.638 kb on - strand, within MPMX20_02425at 2563.653 kb on - strand, within MPMX20_02425at 2563.702 kb on + strand, within MPMX20_02425at 2563.797 kb on + strand, within MPMX20_02425at 2563.834 kb on + strand, within MPMX20_02425at 2563.873 kb on + strand, within MPMX20_02425at 2563.929 kb on - strand, within MPMX20_02425at 2563.951 kb on + strand, within MPMX20_02425at 2563.951 kb on + strand, within MPMX20_02425at 2563.956 kb on + strand, within MPMX20_02425at 2563.959 kb on - strand, within MPMX20_02425at 2564.033 kb on - strand, within MPMX20_02425at 2564.071 kb on + strand, within MPMX20_02425at 2564.178 kb on - strand, within MPMX20_02425at 2564.197 kb on + strand, within MPMX20_02425at 2564.204 kb on + strand, within MPMX20_02425at 2564.205 kb on - strand, within MPMX20_02425at 2564.244 kb on - strand, within MPMX20_02425at 2564.316 kb on - strandat 2564.331 kb on - strandat 2564.344 kb on + strandat 2564.421 kb on + strandat 2564.421 kb on + strandat 2564.421 kb on + strandat 2564.432 kb on - strandat 2564.459 kb on + strandat 2564.467 kb on - strandat 2564.467 kb on - strandat 2564.500 kb on - strand, within MPMX20_02426at 2564.508 kb on - strand, within MPMX20_02426at 2564.518 kb on - strand, within MPMX20_02426at 2564.534 kb on - strand, within MPMX20_02426at 2564.600 kb on + strand, within MPMX20_02426at 2564.600 kb on + strand, within MPMX20_02426at 2564.608 kb on - strand, within MPMX20_02426at 2564.609 kb on - strand, within MPMX20_02426at 2564.614 kb on + strand, within MPMX20_02426at 2564.627 kb on + strand, within MPMX20_02426at 2564.629 kb on + strand, within MPMX20_02426at 2564.629 kb on + strand, within MPMX20_02426at 2564.637 kb on - strand, within MPMX20_02426at 2564.637 kb on - strand, within MPMX20_02426at 2564.641 kb on + strand, within MPMX20_02426at 2564.727 kb on - strandat 2564.729 kb on - strandat 2564.781 kb on + strandat 2564.783 kb on - strandat 2564.844 kb on - strandat 2564.951 kb on - strandat 2565.035 kb on - strandat 2565.049 kb on + strandat 2565.058 kb on - strandat 2565.058 kb on - strandat 2565.058 kb on - strandat 2565.066 kb on + strandat 2565.080 kb on + strandat 2565.112 kb on + strandat 2565.164 kb on + strandat 2565.172 kb on + strandat 2565.172 kb on - strandat 2565.174 kb on + strandat 2565.282 kb on + strand, within MPMX20_02427at 2565.282 kb on + strand, within MPMX20_02427at 2565.282 kb on + strand, within MPMX20_02427at 2565.282 kb on + strand, within MPMX20_02427at 2565.282 kb on + strand, within MPMX20_02427at 2565.290 kb on - strand, within MPMX20_02427at 2565.290 kb on - strand, within MPMX20_02427at 2565.290 kb on - strand, within MPMX20_02427at 2565.290 kb on - strand, within MPMX20_02427at 2565.297 kb on + strand, within MPMX20_02427at 2565.297 kb on - strand, within MPMX20_02427at 2565.346 kb on - strand, within MPMX20_02427at 2565.352 kb on + strand, within MPMX20_02427at 2565.360 kb on - strand, within MPMX20_02427at 2565.367 kb on - strand, within MPMX20_02427at 2565.404 kb on + strand, within MPMX20_02427at 2565.404 kb on + strand, within MPMX20_02427at 2565.404 kb on + strand, within MPMX20_02427at 2565.404 kb on + strand, within MPMX20_02427at 2565.404 kb on + strand, within MPMX20_02427at 2565.412 kb on - strand, within MPMX20_02427at 2565.447 kb on - strand, within MPMX20_02427at 2565.447 kb on - strand, within MPMX20_02427at 2565.466 kb on - strand, within MPMX20_02427at 2565.466 kb on - strand, within MPMX20_02427at 2565.487 kb on - strand, within MPMX20_02427at 2565.523 kb on - strand, within MPMX20_02427at 2565.523 kb on - strand, within MPMX20_02427at 2565.529 kb on + strand, within MPMX20_02427at 2565.529 kb on + strand, within MPMX20_02427at 2565.537 kb on - strand, within MPMX20_02427at 2565.583 kb on - strand, within MPMX20_02427at 2565.588 kb on + strand, within MPMX20_02427at 2565.594 kb on - strand, within MPMX20_02427

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,563,481 - MPMX20_02425 0.35 -0.8
2,563,489 - MPMX20_02425 0.35 -0.0
2,563,516 - MPMX20_02425 0.37 -0.9
2,563,526 - MPMX20_02425 0.38 +1.6
2,563,571 - MPMX20_02425 0.41 -0.5
2,563,573 + MPMX20_02425 0.41 -0.2
2,563,573 + MPMX20_02425 0.41 +0.4
2,563,573 + MPMX20_02425 0.41 -0.8
2,563,581 - MPMX20_02425 0.42 -1.5
2,563,581 - MPMX20_02425 0.42 -0.5
2,563,581 - MPMX20_02425 0.42 -0.6
2,563,630 + MPMX20_02425 0.45 -0.9
2,563,637 + MPMX20_02425 0.46 -0.1
2,563,638 - MPMX20_02425 0.46 -0.8
2,563,653 - MPMX20_02425 0.47 -0.9
2,563,702 + MPMX20_02425 0.51 +1.1
2,563,797 + MPMX20_02425 0.57 +0.8
2,563,834 + MPMX20_02425 0.60 -0.1
2,563,873 + MPMX20_02425 0.63 -1.0
2,563,929 - MPMX20_02425 0.67 -1.1
2,563,951 + MPMX20_02425 0.68 -0.7
2,563,951 + MPMX20_02425 0.68 +0.2
2,563,956 + MPMX20_02425 0.69 -1.2
2,563,959 - MPMX20_02425 0.69 -0.4
2,564,033 - MPMX20_02425 0.74 -0.0
2,564,071 + MPMX20_02425 0.77 -0.7
2,564,178 - MPMX20_02425 0.84 +0.5
2,564,197 + MPMX20_02425 0.86 +0.1
2,564,204 + MPMX20_02425 0.86 -0.4
2,564,205 - MPMX20_02425 0.86 +0.1
2,564,244 - MPMX20_02425 0.89 +0.0
2,564,316 - -1.0
2,564,331 - -0.5
2,564,344 + +0.6
2,564,421 + -1.7
2,564,421 + +1.6
2,564,421 + -0.7
2,564,432 - +1.2
2,564,459 + -0.9
2,564,467 - +0.2
2,564,467 - +0.5
2,564,500 - MPMX20_02426 0.10 -1.9
2,564,508 - MPMX20_02426 0.14 -1.2
2,564,518 - MPMX20_02426 0.20 -0.5
2,564,534 - MPMX20_02426 0.28 -1.2
2,564,600 + MPMX20_02426 0.63 -1.1
2,564,600 + MPMX20_02426 0.63 +1.2
2,564,608 - MPMX20_02426 0.67 -0.1
2,564,609 - MPMX20_02426 0.68 +1.2
2,564,614 + MPMX20_02426 0.70 -2.7
2,564,627 + MPMX20_02426 0.77 -1.4
2,564,629 + MPMX20_02426 0.78 -1.6
2,564,629 + MPMX20_02426 0.78 -1.1
2,564,637 - MPMX20_02426 0.83 +0.8
2,564,637 - MPMX20_02426 0.83 -1.4
2,564,641 + MPMX20_02426 0.85 +0.3
2,564,727 - -0.4
2,564,729 - +0.2
2,564,781 + -0.9
2,564,783 - +0.2
2,564,844 - +0.8
2,564,951 - +0.2
2,565,035 - +1.5
2,565,049 + +0.2
2,565,058 - +0.0
2,565,058 - -1.9
2,565,058 - +1.0
2,565,066 + -1.1
2,565,080 + +2.3
2,565,112 + +5.3
2,565,164 + -0.0
2,565,172 + -1.9
2,565,172 - -0.5
2,565,174 + -0.3
2,565,282 + MPMX20_02427 0.16 +0.0
2,565,282 + MPMX20_02427 0.16 -0.5
2,565,282 + MPMX20_02427 0.16 -0.4
2,565,282 + MPMX20_02427 0.16 +0.5
2,565,282 + MPMX20_02427 0.16 -2.0
2,565,290 - MPMX20_02427 0.16 +0.2
2,565,290 - MPMX20_02427 0.16 -0.9
2,565,290 - MPMX20_02427 0.16 -1.7
2,565,290 - MPMX20_02427 0.16 +0.8
2,565,297 + MPMX20_02427 0.17 -1.0
2,565,297 - MPMX20_02427 0.17 -0.7
2,565,346 - MPMX20_02427 0.20 -1.4
2,565,352 + MPMX20_02427 0.21 -1.0
2,565,360 - MPMX20_02427 0.21 -1.8
2,565,367 - MPMX20_02427 0.22 -1.0
2,565,404 + MPMX20_02427 0.24 -2.5
2,565,404 + MPMX20_02427 0.24 -1.2
2,565,404 + MPMX20_02427 0.24 -0.5
2,565,404 + MPMX20_02427 0.24 -0.5
2,565,404 + MPMX20_02427 0.24 -2.7
2,565,412 - MPMX20_02427 0.25 -2.0
2,565,447 - MPMX20_02427 0.27 -0.9
2,565,447 - MPMX20_02427 0.27 -0.8
2,565,466 - MPMX20_02427 0.29 +0.3
2,565,466 - MPMX20_02427 0.29 +0.1
2,565,487 - MPMX20_02427 0.30 +0.5
2,565,523 - MPMX20_02427 0.33 -0.5
2,565,523 - MPMX20_02427 0.33 +1.1
2,565,529 + MPMX20_02427 0.33 +0.1
2,565,529 + MPMX20_02427 0.33 +1.2
2,565,537 - MPMX20_02427 0.34 -0.4
2,565,583 - MPMX20_02427 0.37 -2.1
2,565,588 + MPMX20_02427 0.37 -0.2
2,565,594 - MPMX20_02427 0.38 -0.7

Or see this region's nucleotide sequence