Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01252

Experiment: M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01250 and MPMX20_01251 are separated by 0 nucleotidesMPMX20_01251 and MPMX20_01252 are separated by 47 nucleotidesMPMX20_01252 and MPMX20_01253 are separated by 13 nucleotidesMPMX20_01253 and MPMX20_01254 overlap by 4 nucleotides MPMX20_01250: MPMX20_01250 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 1,314,664 to 1,315,419 _01250 MPMX20_01251: MPMX20_01251 - Proofreading thioesterase EntH, at 1,315,420 to 1,315,833 _01251 MPMX20_01252: MPMX20_01252 - Carboxypeptidase G2, at 1,315,881 to 1,316,993 _01252 MPMX20_01253: MPMX20_01253 - Inner membrane protein YjiG, at 1,317,007 to 1,317,471 _01253 MPMX20_01254: MPMX20_01254 - hypothetical protein, at 1,317,468 to 1,318,190 _01254 Position (kb) 1315 1316 1317Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1314.969 kb on - strand, within MPMX20_01250at 1315.000 kb on - strand, within MPMX20_01250at 1315.106 kb on - strand, within MPMX20_01250at 1315.148 kb on + strand, within MPMX20_01250at 1315.188 kb on - strand, within MPMX20_01250at 1315.199 kb on - strand, within MPMX20_01250at 1315.204 kb on - strand, within MPMX20_01250at 1315.246 kb on + strand, within MPMX20_01250at 1315.249 kb on - strand, within MPMX20_01250at 1315.278 kb on + strand, within MPMX20_01250at 1315.278 kb on + strand, within MPMX20_01250at 1315.278 kb on + strand, within MPMX20_01250at 1315.278 kb on + strand, within MPMX20_01250at 1315.286 kb on - strand, within MPMX20_01250at 1315.286 kb on - strand, within MPMX20_01250at 1315.297 kb on - strand, within MPMX20_01250at 1315.344 kb on - strandat 1315.344 kb on - strandat 1315.380 kb on + strandat 1315.408 kb on - strandat 1315.465 kb on + strand, within MPMX20_01251at 1315.473 kb on - strand, within MPMX20_01251at 1315.486 kb on + strand, within MPMX20_01251at 1315.486 kb on + strand, within MPMX20_01251at 1315.556 kb on + strand, within MPMX20_01251at 1315.556 kb on + strand, within MPMX20_01251at 1315.556 kb on + strand, within MPMX20_01251at 1315.564 kb on - strand, within MPMX20_01251at 1315.564 kb on - strand, within MPMX20_01251at 1315.672 kb on - strand, within MPMX20_01251at 1315.703 kb on + strand, within MPMX20_01251at 1315.720 kb on + strand, within MPMX20_01251at 1315.750 kb on + strand, within MPMX20_01251at 1315.758 kb on - strand, within MPMX20_01251at 1315.764 kb on + strand, within MPMX20_01251at 1315.789 kb on + strand, within MPMX20_01251at 1315.794 kb on + strandat 1315.797 kb on - strandat 1315.833 kb on + strandat 1315.841 kb on - strandat 1315.842 kb on + strandat 1315.843 kb on + strandat 1315.851 kb on - strandat 1315.851 kb on - strandat 1315.851 kb on - strandat 1315.867 kb on - strandat 1315.872 kb on + strandat 1315.886 kb on - strandat 1315.886 kb on - strandat 1315.918 kb on - strandat 1315.949 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1316.014 kb on + strand, within MPMX20_01252at 1316.017 kb on - strand, within MPMX20_01252at 1316.164 kb on + strand, within MPMX20_01252at 1316.312 kb on + strand, within MPMX20_01252at 1316.312 kb on + strand, within MPMX20_01252at 1316.320 kb on - strand, within MPMX20_01252at 1316.320 kb on - strand, within MPMX20_01252at 1316.320 kb on - strand, within MPMX20_01252at 1316.385 kb on + strand, within MPMX20_01252at 1316.442 kb on + strand, within MPMX20_01252at 1316.484 kb on - strand, within MPMX20_01252at 1316.499 kb on - strand, within MPMX20_01252at 1316.541 kb on - strand, within MPMX20_01252at 1316.572 kb on + strand, within MPMX20_01252at 1316.610 kb on + strand, within MPMX20_01252at 1316.610 kb on + strand, within MPMX20_01252at 1316.617 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.690 kb on + strand, within MPMX20_01252at 1316.713 kb on - strand, within MPMX20_01252at 1316.786 kb on + strand, within MPMX20_01252at 1316.831 kb on + strand, within MPMX20_01252at 1316.856 kb on - strand, within MPMX20_01252at 1316.929 kb on + strandat 1316.932 kb on - strandat 1316.959 kb on + strandat 1316.960 kb on - strandat 1317.020 kb on - strandat 1317.034 kb on + strandat 1317.070 kb on - strand, within MPMX20_01253at 1317.129 kb on + strand, within MPMX20_01253at 1317.129 kb on + strand, within MPMX20_01253at 1317.134 kb on - strand, within MPMX20_01253at 1317.137 kb on - strand, within MPMX20_01253at 1317.301 kb on + strand, within MPMX20_01253at 1317.320 kb on + strand, within MPMX20_01253at 1317.347 kb on + strand, within MPMX20_01253at 1317.387 kb on - strand, within MPMX20_01253at 1317.403 kb on + strand, within MPMX20_01253at 1317.457 kb on - strandat 1317.475 kb on - strandat 1317.569 kb on + strand, within MPMX20_01254at 1317.595 kb on - strand, within MPMX20_01254at 1317.632 kb on + strand, within MPMX20_01254at 1317.632 kb on + strand, within MPMX20_01254at 1317.632 kb on + strand, within MPMX20_01254at 1317.632 kb on + strand, within MPMX20_01254at 1317.632 kb on + strand, within MPMX20_01254at 1317.640 kb on - strand, within MPMX20_01254at 1317.640 kb on - strand, within MPMX20_01254at 1317.641 kb on + strand, within MPMX20_01254at 1317.642 kb on + strand, within MPMX20_01254at 1317.697 kb on - strand, within MPMX20_01254at 1317.746 kb on + strand, within MPMX20_01254at 1317.754 kb on - strand, within MPMX20_01254at 1317.754 kb on - strand, within MPMX20_01254at 1317.777 kb on + strand, within MPMX20_01254at 1317.872 kb on + strand, within MPMX20_01254at 1317.873 kb on - strand, within MPMX20_01254at 1317.885 kb on - strand, within MPMX20_01254at 1317.902 kb on + strand, within MPMX20_01254at 1317.915 kb on + strand, within MPMX20_01254

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,314,969 - MPMX20_01250 0.40 +1.4
1,315,000 - MPMX20_01250 0.44 -0.3
1,315,106 - MPMX20_01250 0.58 -0.9
1,315,148 + MPMX20_01250 0.64 -2.5
1,315,188 - MPMX20_01250 0.69 +0.2
1,315,199 - MPMX20_01250 0.71 +0.5
1,315,204 - MPMX20_01250 0.71 -0.1
1,315,246 + MPMX20_01250 0.77 -0.3
1,315,249 - MPMX20_01250 0.77 +0.2
1,315,278 + MPMX20_01250 0.81 -1.2
1,315,278 + MPMX20_01250 0.81 -0.2
1,315,278 + MPMX20_01250 0.81 -0.7
1,315,278 + MPMX20_01250 0.81 -0.2
1,315,286 - MPMX20_01250 0.82 -0.3
1,315,286 - MPMX20_01250 0.82 -2.3
1,315,297 - MPMX20_01250 0.84 -0.4
1,315,344 - +0.5
1,315,344 - -0.3
1,315,380 + -0.2
1,315,408 - +0.8
1,315,465 + MPMX20_01251 0.11 -0.4
1,315,473 - MPMX20_01251 0.13 -1.0
1,315,486 + MPMX20_01251 0.16 -0.8
1,315,486 + MPMX20_01251 0.16 -1.4
1,315,556 + MPMX20_01251 0.33 -0.3
1,315,556 + MPMX20_01251 0.33 -0.3
1,315,556 + MPMX20_01251 0.33 -2.3
1,315,564 - MPMX20_01251 0.35 +1.2
1,315,564 - MPMX20_01251 0.35 -0.6
1,315,672 - MPMX20_01251 0.61 +1.2
1,315,703 + MPMX20_01251 0.68 -1.3
1,315,720 + MPMX20_01251 0.72 -0.8
1,315,750 + MPMX20_01251 0.80 -1.7
1,315,758 - MPMX20_01251 0.82 -1.6
1,315,764 + MPMX20_01251 0.83 -0.3
1,315,789 + MPMX20_01251 0.89 -0.2
1,315,794 + -0.1
1,315,797 - +0.8
1,315,833 + -0.9
1,315,841 - +0.8
1,315,842 + -0.4
1,315,843 + -1.2
1,315,851 - -0.6
1,315,851 - -1.3
1,315,851 - -0.6
1,315,867 - -0.6
1,315,872 + +1.8
1,315,886 - +0.1
1,315,886 - +0.7
1,315,918 - -0.3
1,315,949 + -1.0
1,315,979 + -0.5
1,315,979 + +2.5
1,315,979 + -1.4
1,315,979 + -0.9
1,315,979 + -1.4
1,315,979 + -1.0
1,315,979 + -0.2
1,315,979 + -0.5
1,315,979 + -0.6
1,315,979 + -0.5
1,315,987 - +0.4
1,315,987 - -0.1
1,315,987 - -1.1
1,315,987 - -0.2
1,315,987 - +0.2
1,315,987 - +1.2
1,315,987 - -0.1
1,315,987 - -1.8
1,316,014 + MPMX20_01252 0.12 -1.0
1,316,017 - MPMX20_01252 0.12 -0.8
1,316,164 + MPMX20_01252 0.25 -0.6
1,316,312 + MPMX20_01252 0.39 -0.3
1,316,312 + MPMX20_01252 0.39 +0.5
1,316,320 - MPMX20_01252 0.39 -1.9
1,316,320 - MPMX20_01252 0.39 -0.7
1,316,320 - MPMX20_01252 0.39 +0.2
1,316,385 + MPMX20_01252 0.45 -0.6
1,316,442 + MPMX20_01252 0.50 +0.2
1,316,484 - MPMX20_01252 0.54 +1.8
1,316,499 - MPMX20_01252 0.56 -0.9
1,316,541 - MPMX20_01252 0.59 +0.8
1,316,572 + MPMX20_01252 0.62 -1.3
1,316,610 + MPMX20_01252 0.65 +0.2
1,316,610 + MPMX20_01252 0.65 +1.8
1,316,617 + MPMX20_01252 0.66 -0.5
1,316,676 + MPMX20_01252 0.71 -2.8
1,316,676 + MPMX20_01252 0.71 -0.1
1,316,676 + MPMX20_01252 0.71 -1.8
1,316,676 + MPMX20_01252 0.71 +1.0
1,316,676 + MPMX20_01252 0.71 -2.2
1,316,690 + MPMX20_01252 0.73 +2.8
1,316,713 - MPMX20_01252 0.75 -1.5
1,316,786 + MPMX20_01252 0.81 -0.9
1,316,831 + MPMX20_01252 0.85 -1.3
1,316,856 - MPMX20_01252 0.88 -0.6
1,316,929 + -1.5
1,316,932 - +2.8
1,316,959 + +1.3
1,316,960 - -0.8
1,317,020 - -0.2
1,317,034 + -2.2
1,317,070 - MPMX20_01253 0.14 +0.7
1,317,129 + MPMX20_01253 0.26 -1.1
1,317,129 + MPMX20_01253 0.26 +0.0
1,317,134 - MPMX20_01253 0.27 +1.8
1,317,137 - MPMX20_01253 0.28 +2.8
1,317,301 + MPMX20_01253 0.63 +0.5
1,317,320 + MPMX20_01253 0.67 -0.2
1,317,347 + MPMX20_01253 0.73 +0.0
1,317,387 - MPMX20_01253 0.82 -0.9
1,317,403 + MPMX20_01253 0.85 +1.4
1,317,457 - +1.3
1,317,475 - -1.0
1,317,569 + MPMX20_01254 0.14 -1.6
1,317,595 - MPMX20_01254 0.18 +0.0
1,317,632 + MPMX20_01254 0.23 -1.1
1,317,632 + MPMX20_01254 0.23 -0.7
1,317,632 + MPMX20_01254 0.23 +1.2
1,317,632 + MPMX20_01254 0.23 +0.5
1,317,632 + MPMX20_01254 0.23 -0.0
1,317,640 - MPMX20_01254 0.24 +0.9
1,317,640 - MPMX20_01254 0.24 +0.5
1,317,641 + MPMX20_01254 0.24 +0.2
1,317,642 + MPMX20_01254 0.24 +0.9
1,317,697 - MPMX20_01254 0.32 -1.6
1,317,746 + MPMX20_01254 0.38 -1.3
1,317,754 - MPMX20_01254 0.40 -0.1
1,317,754 - MPMX20_01254 0.40 -0.2
1,317,777 + MPMX20_01254 0.43 -1.5
1,317,872 + MPMX20_01254 0.56 +0.5
1,317,873 - MPMX20_01254 0.56 -0.3
1,317,885 - MPMX20_01254 0.58 +1.8
1,317,902 + MPMX20_01254 0.60 +0.4
1,317,915 + MPMX20_01254 0.62 +0.3

Or see this region's nucleotide sequence