Experiment: M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01241 and MPMX20_01242 are separated by 47 nucleotides MPMX20_01242 and MPMX20_01243 overlap by 4 nucleotides MPMX20_01243 and MPMX20_01244 overlap by 4 nucleotides
MPMX20_01241: MPMX20_01241 - Enterobactin synthase component F, at 1,301,761 to 1,305,618
_01241
MPMX20_01242: MPMX20_01242 - Ferric enterobactin transport ATP-binding protein FepC, at 1,305,666 to 1,306,466
_01242
MPMX20_01243: MPMX20_01243 - Ferric enterobactin transport system permease protein FepG, at 1,306,463 to 1,307,455
_01243
MPMX20_01244: MPMX20_01244 - Ferric enterobactin transport system permease protein FepD, at 1,307,452 to 1,308,456
_01244
Position (kb)
1306
1307
1308 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1305.498 kb on + strand at 1305.506 kb on - strand at 1305.592 kb on - strand at 1305.593 kb on - strand at 1305.631 kb on + strand at 1305.639 kb on - strand at 1305.640 kb on - strand at 1305.645 kb on + strand at 1305.655 kb on + strand at 1305.727 kb on + strand at 1305.742 kb on + strand at 1305.742 kb on + strand at 1305.750 kb on - strand, within MPMX20_01242 at 1305.750 kb on - strand, within MPMX20_01242 at 1305.750 kb on - strand, within MPMX20_01242 at 1305.750 kb on - strand, within MPMX20_01242 at 1305.835 kb on + strand, within MPMX20_01242 at 1305.843 kb on - strand, within MPMX20_01242 at 1305.878 kb on + strand, within MPMX20_01242 at 1305.880 kb on + strand, within MPMX20_01242 at 1305.886 kb on - strand, within MPMX20_01242 at 1305.897 kb on + strand, within MPMX20_01242 at 1306.033 kb on - strand, within MPMX20_01242 at 1306.037 kb on + strand, within MPMX20_01242 at 1306.120 kb on - strand, within MPMX20_01242 at 1306.248 kb on + strand, within MPMX20_01242 at 1306.281 kb on + strand, within MPMX20_01242 at 1306.289 kb on - strand, within MPMX20_01242 at 1306.322 kb on + strand, within MPMX20_01242 at 1306.333 kb on + strand, within MPMX20_01242 at 1306.431 kb on - strand at 1306.433 kb on - strand at 1306.569 kb on + strand, within MPMX20_01243 at 1306.569 kb on + strand, within MPMX20_01243 at 1306.576 kb on + strand, within MPMX20_01243 at 1306.584 kb on - strand, within MPMX20_01243 at 1306.589 kb on + strand, within MPMX20_01243 at 1306.729 kb on - strand, within MPMX20_01243 at 1306.877 kb on + strand, within MPMX20_01243 at 1306.878 kb on + strand, within MPMX20_01243 at 1306.897 kb on - strand, within MPMX20_01243 at 1306.911 kb on + strand, within MPMX20_01243 at 1307.025 kb on - strand, within MPMX20_01243 at 1307.121 kb on - strand, within MPMX20_01243 at 1307.158 kb on - strand, within MPMX20_01243 at 1307.187 kb on - strand, within MPMX20_01243 at 1307.187 kb on - strand, within MPMX20_01243 at 1307.299 kb on + strand, within MPMX20_01243 at 1307.299 kb on + strand, within MPMX20_01243 at 1307.307 kb on - strand, within MPMX20_01243 at 1307.307 kb on - strand, within MPMX20_01243 at 1307.307 kb on - strand, within MPMX20_01243 at 1307.317 kb on - strand, within MPMX20_01243 at 1307.319 kb on + strand, within MPMX20_01243 at 1307.321 kb on + strand, within MPMX20_01243 at 1307.321 kb on + strand, within MPMX20_01243 at 1307.327 kb on - strand, within MPMX20_01243 at 1307.327 kb on - strand, within MPMX20_01243 at 1307.372 kb on + strand at 1307.380 kb on - strand at 1307.436 kb on + strand at 1307.483 kb on + strand at 1307.520 kb on + strand at 1307.591 kb on - strand, within MPMX20_01244 at 1307.630 kb on + strand, within MPMX20_01244 at 1307.794 kb on + strand, within MPMX20_01244 at 1307.802 kb on - strand, within MPMX20_01244 at 1307.815 kb on + strand, within MPMX20_01244 at 1307.824 kb on - strand, within MPMX20_01244 at 1307.873 kb on + strand, within MPMX20_01244 at 1307.873 kb on - strand, within MPMX20_01244 at 1307.907 kb on + strand, within MPMX20_01244 at 1307.939 kb on - strand, within MPMX20_01244 at 1308.014 kb on + strand, within MPMX20_01244 at 1308.141 kb on - strand, within MPMX20_01244 at 1308.168 kb on - strand, within MPMX20_01244 at 1308.195 kb on + strand, within MPMX20_01244 at 1308.203 kb on - strand, within MPMX20_01244 at 1308.203 kb on - strand, within MPMX20_01244 at 1308.284 kb on - strand, within MPMX20_01244 at 1308.362 kb on + strand at 1308.377 kb on - strand at 1308.394 kb on + strand at 1308.428 kb on - strand at 1308.435 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,305,498 + +0.7 1,305,506 - -0.6 1,305,592 - -0.9 1,305,593 - -0.8 1,305,631 + +0.8 1,305,639 - -1.6 1,305,640 - +0.1 1,305,645 + -1.0 1,305,655 + -1.6 1,305,727 + -0.2 1,305,742 + -1.7 1,305,742 + +0.6 1,305,750 - MPMX20_01242 0.10 -0.5 1,305,750 - MPMX20_01242 0.10 -0.4 1,305,750 - MPMX20_01242 0.10 +0.5 1,305,750 - MPMX20_01242 0.10 -0.4 1,305,835 + MPMX20_01242 0.21 +1.4 1,305,843 - MPMX20_01242 0.22 +0.8 1,305,878 + MPMX20_01242 0.26 +0.2 1,305,880 + MPMX20_01242 0.27 -2.5 1,305,886 - MPMX20_01242 0.27 -0.4 1,305,897 + MPMX20_01242 0.29 -1.1 1,306,033 - MPMX20_01242 0.46 -0.1 1,306,037 + MPMX20_01242 0.46 -2.1 1,306,120 - MPMX20_01242 0.57 -0.5 1,306,248 + MPMX20_01242 0.73 +0.0 1,306,281 + MPMX20_01242 0.77 -2.1 1,306,289 - MPMX20_01242 0.78 -1.0 1,306,322 + MPMX20_01242 0.82 -1.3 1,306,333 + MPMX20_01242 0.83 -0.9 1,306,431 - +1.2 1,306,433 - +0.5 1,306,569 + MPMX20_01243 0.11 -1.2 1,306,569 + MPMX20_01243 0.11 +0.0 1,306,576 + MPMX20_01243 0.11 -2.0 1,306,584 - MPMX20_01243 0.12 +0.0 1,306,589 + MPMX20_01243 0.13 -1.8 1,306,729 - MPMX20_01243 0.27 -0.6 1,306,877 + MPMX20_01243 0.42 -0.2 1,306,878 + MPMX20_01243 0.42 +0.5 1,306,897 - MPMX20_01243 0.44 -1.1 1,306,911 + MPMX20_01243 0.45 -2.7 1,307,025 - MPMX20_01243 0.57 -2.4 1,307,121 - MPMX20_01243 0.66 -1.8 1,307,158 - MPMX20_01243 0.70 +2.8 1,307,187 - MPMX20_01243 0.73 -1.4 1,307,187 - MPMX20_01243 0.73 -1.4 1,307,299 + MPMX20_01243 0.84 -3.1 1,307,299 + MPMX20_01243 0.84 -2.2 1,307,307 - MPMX20_01243 0.85 +1.2 1,307,307 - MPMX20_01243 0.85 -1.1 1,307,307 - MPMX20_01243 0.85 -1.7 1,307,317 - MPMX20_01243 0.86 -1.2 1,307,319 + MPMX20_01243 0.86 -2.5 1,307,321 + MPMX20_01243 0.86 -1.9 1,307,321 + MPMX20_01243 0.86 -2.0 1,307,327 - MPMX20_01243 0.87 -1.0 1,307,327 - MPMX20_01243 0.87 -2.8 1,307,372 + -0.5 1,307,380 - -1.1 1,307,436 + +0.6 1,307,483 + -0.7 1,307,520 + -2.6 1,307,591 - MPMX20_01244 0.14 -2.3 1,307,630 + MPMX20_01244 0.18 -1.5 1,307,794 + MPMX20_01244 0.34 -1.0 1,307,802 - MPMX20_01244 0.35 -0.2 1,307,815 + MPMX20_01244 0.36 -1.3 1,307,824 - MPMX20_01244 0.37 -2.0 1,307,873 + MPMX20_01244 0.42 -1.9 1,307,873 - MPMX20_01244 0.42 -0.2 1,307,907 + MPMX20_01244 0.45 +0.2 1,307,939 - MPMX20_01244 0.48 -1.7 1,308,014 + MPMX20_01244 0.56 -1.0 1,308,141 - MPMX20_01244 0.69 -2.6 1,308,168 - MPMX20_01244 0.71 -0.2 1,308,195 + MPMX20_01244 0.74 -0.9 1,308,203 - MPMX20_01244 0.75 -2.2 1,308,203 - MPMX20_01244 0.75 -1.4 1,308,284 - MPMX20_01244 0.83 -1.2 1,308,362 + -1.6 1,308,377 - +1.8 1,308,394 + -1.1 1,308,428 - -3.1 1,308,435 + +1.2
Or see this region's nucleotide sequence