Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01243

Experiment: M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01241 and MPMX20_01242 are separated by 47 nucleotidesMPMX20_01242 and MPMX20_01243 overlap by 4 nucleotidesMPMX20_01243 and MPMX20_01244 overlap by 4 nucleotides MPMX20_01241: MPMX20_01241 - Enterobactin synthase component F, at 1,301,761 to 1,305,618 _01241 MPMX20_01242: MPMX20_01242 - Ferric enterobactin transport ATP-binding protein FepC, at 1,305,666 to 1,306,466 _01242 MPMX20_01243: MPMX20_01243 - Ferric enterobactin transport system permease protein FepG, at 1,306,463 to 1,307,455 _01243 MPMX20_01244: MPMX20_01244 - Ferric enterobactin transport system permease protein FepD, at 1,307,452 to 1,308,456 _01244 Position (kb) 1306 1307 1308Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1305.498 kb on + strandat 1305.506 kb on - strandat 1305.592 kb on - strandat 1305.593 kb on - strandat 1305.631 kb on + strandat 1305.639 kb on - strandat 1305.640 kb on - strandat 1305.645 kb on + strandat 1305.655 kb on + strandat 1305.727 kb on + strandat 1305.742 kb on + strandat 1305.742 kb on + strandat 1305.750 kb on - strand, within MPMX20_01242at 1305.750 kb on - strand, within MPMX20_01242at 1305.750 kb on - strand, within MPMX20_01242at 1305.750 kb on - strand, within MPMX20_01242at 1305.835 kb on + strand, within MPMX20_01242at 1305.843 kb on - strand, within MPMX20_01242at 1305.878 kb on + strand, within MPMX20_01242at 1305.880 kb on + strand, within MPMX20_01242at 1305.886 kb on - strand, within MPMX20_01242at 1305.897 kb on + strand, within MPMX20_01242at 1306.033 kb on - strand, within MPMX20_01242at 1306.037 kb on + strand, within MPMX20_01242at 1306.120 kb on - strand, within MPMX20_01242at 1306.248 kb on + strand, within MPMX20_01242at 1306.281 kb on + strand, within MPMX20_01242at 1306.289 kb on - strand, within MPMX20_01242at 1306.322 kb on + strand, within MPMX20_01242at 1306.333 kb on + strand, within MPMX20_01242at 1306.431 kb on - strandat 1306.433 kb on - strandat 1306.569 kb on + strand, within MPMX20_01243at 1306.569 kb on + strand, within MPMX20_01243at 1306.576 kb on + strand, within MPMX20_01243at 1306.584 kb on - strand, within MPMX20_01243at 1306.589 kb on + strand, within MPMX20_01243at 1306.729 kb on - strand, within MPMX20_01243at 1306.877 kb on + strand, within MPMX20_01243at 1306.878 kb on + strand, within MPMX20_01243at 1306.897 kb on - strand, within MPMX20_01243at 1306.911 kb on + strand, within MPMX20_01243at 1307.025 kb on - strand, within MPMX20_01243at 1307.121 kb on - strand, within MPMX20_01243at 1307.158 kb on - strand, within MPMX20_01243at 1307.187 kb on - strand, within MPMX20_01243at 1307.187 kb on - strand, within MPMX20_01243at 1307.299 kb on + strand, within MPMX20_01243at 1307.299 kb on + strand, within MPMX20_01243at 1307.307 kb on - strand, within MPMX20_01243at 1307.307 kb on - strand, within MPMX20_01243at 1307.307 kb on - strand, within MPMX20_01243at 1307.317 kb on - strand, within MPMX20_01243at 1307.319 kb on + strand, within MPMX20_01243at 1307.321 kb on + strand, within MPMX20_01243at 1307.321 kb on + strand, within MPMX20_01243at 1307.327 kb on - strand, within MPMX20_01243at 1307.327 kb on - strand, within MPMX20_01243at 1307.372 kb on + strandat 1307.380 kb on - strandat 1307.436 kb on + strandat 1307.483 kb on + strandat 1307.520 kb on + strandat 1307.591 kb on - strand, within MPMX20_01244at 1307.630 kb on + strand, within MPMX20_01244at 1307.794 kb on + strand, within MPMX20_01244at 1307.802 kb on - strand, within MPMX20_01244at 1307.815 kb on + strand, within MPMX20_01244at 1307.824 kb on - strand, within MPMX20_01244at 1307.873 kb on + strand, within MPMX20_01244at 1307.873 kb on - strand, within MPMX20_01244at 1307.907 kb on + strand, within MPMX20_01244at 1307.939 kb on - strand, within MPMX20_01244at 1308.014 kb on + strand, within MPMX20_01244at 1308.141 kb on - strand, within MPMX20_01244at 1308.168 kb on - strand, within MPMX20_01244at 1308.195 kb on + strand, within MPMX20_01244at 1308.203 kb on - strand, within MPMX20_01244at 1308.203 kb on - strand, within MPMX20_01244at 1308.284 kb on - strand, within MPMX20_01244at 1308.362 kb on + strandat 1308.377 kb on - strandat 1308.394 kb on + strandat 1308.428 kb on - strandat 1308.435 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,305,498 + +0.7
1,305,506 - -0.6
1,305,592 - -0.9
1,305,593 - -0.8
1,305,631 + +0.8
1,305,639 - -1.6
1,305,640 - +0.1
1,305,645 + -1.0
1,305,655 + -1.6
1,305,727 + -0.2
1,305,742 + -1.7
1,305,742 + +0.6
1,305,750 - MPMX20_01242 0.10 -0.5
1,305,750 - MPMX20_01242 0.10 -0.4
1,305,750 - MPMX20_01242 0.10 +0.5
1,305,750 - MPMX20_01242 0.10 -0.4
1,305,835 + MPMX20_01242 0.21 +1.4
1,305,843 - MPMX20_01242 0.22 +0.8
1,305,878 + MPMX20_01242 0.26 +0.2
1,305,880 + MPMX20_01242 0.27 -2.5
1,305,886 - MPMX20_01242 0.27 -0.4
1,305,897 + MPMX20_01242 0.29 -1.1
1,306,033 - MPMX20_01242 0.46 -0.1
1,306,037 + MPMX20_01242 0.46 -2.1
1,306,120 - MPMX20_01242 0.57 -0.5
1,306,248 + MPMX20_01242 0.73 +0.0
1,306,281 + MPMX20_01242 0.77 -2.1
1,306,289 - MPMX20_01242 0.78 -1.0
1,306,322 + MPMX20_01242 0.82 -1.3
1,306,333 + MPMX20_01242 0.83 -0.9
1,306,431 - +1.2
1,306,433 - +0.5
1,306,569 + MPMX20_01243 0.11 -1.2
1,306,569 + MPMX20_01243 0.11 +0.0
1,306,576 + MPMX20_01243 0.11 -2.0
1,306,584 - MPMX20_01243 0.12 +0.0
1,306,589 + MPMX20_01243 0.13 -1.8
1,306,729 - MPMX20_01243 0.27 -0.6
1,306,877 + MPMX20_01243 0.42 -0.2
1,306,878 + MPMX20_01243 0.42 +0.5
1,306,897 - MPMX20_01243 0.44 -1.1
1,306,911 + MPMX20_01243 0.45 -2.7
1,307,025 - MPMX20_01243 0.57 -2.4
1,307,121 - MPMX20_01243 0.66 -1.8
1,307,158 - MPMX20_01243 0.70 +2.8
1,307,187 - MPMX20_01243 0.73 -1.4
1,307,187 - MPMX20_01243 0.73 -1.4
1,307,299 + MPMX20_01243 0.84 -3.1
1,307,299 + MPMX20_01243 0.84 -2.2
1,307,307 - MPMX20_01243 0.85 +1.2
1,307,307 - MPMX20_01243 0.85 -1.1
1,307,307 - MPMX20_01243 0.85 -1.7
1,307,317 - MPMX20_01243 0.86 -1.2
1,307,319 + MPMX20_01243 0.86 -2.5
1,307,321 + MPMX20_01243 0.86 -1.9
1,307,321 + MPMX20_01243 0.86 -2.0
1,307,327 - MPMX20_01243 0.87 -1.0
1,307,327 - MPMX20_01243 0.87 -2.8
1,307,372 + -0.5
1,307,380 - -1.1
1,307,436 + +0.6
1,307,483 + -0.7
1,307,520 + -2.6
1,307,591 - MPMX20_01244 0.14 -2.3
1,307,630 + MPMX20_01244 0.18 -1.5
1,307,794 + MPMX20_01244 0.34 -1.0
1,307,802 - MPMX20_01244 0.35 -0.2
1,307,815 + MPMX20_01244 0.36 -1.3
1,307,824 - MPMX20_01244 0.37 -2.0
1,307,873 + MPMX20_01244 0.42 -1.9
1,307,873 - MPMX20_01244 0.42 -0.2
1,307,907 + MPMX20_01244 0.45 +0.2
1,307,939 - MPMX20_01244 0.48 -1.7
1,308,014 + MPMX20_01244 0.56 -1.0
1,308,141 - MPMX20_01244 0.69 -2.6
1,308,168 - MPMX20_01244 0.71 -0.2
1,308,195 + MPMX20_01244 0.74 -0.9
1,308,203 - MPMX20_01244 0.75 -2.2
1,308,203 - MPMX20_01244 0.75 -1.4
1,308,284 - MPMX20_01244 0.83 -1.2
1,308,362 + -1.6
1,308,377 - +1.8
1,308,394 + -1.1
1,308,428 - -3.1
1,308,435 + +1.2

Or see this region's nucleotide sequence