Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01068

Experiment: M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01067 and MPMX20_01068 are separated by 1 nucleotidesMPMX20_01068 and MPMX20_01069 are separated by 12 nucleotidesMPMX20_01069 and MPMX20_01070 are separated by 50 nucleotides MPMX20_01067: MPMX20_01067 - Mechanosensitive channel MscK, at 1,123,529 to 1,126,876 _01067 MPMX20_01068: MPMX20_01068 - hypothetical protein, at 1,126,878 to 1,127,063 _01068 MPMX20_01069: MPMX20_01069 - Primosomal replication protein N'', at 1,127,076 to 1,127,603 _01069 MPMX20_01070: MPMX20_01070 - Inner membrane protein YbaN, at 1,127,654 to 1,128,031 _01070 Position (kb) 1126 1127 1128Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1125.882 kb on + strand, within MPMX20_01067at 1125.900 kb on - strand, within MPMX20_01067at 1125.907 kb on + strand, within MPMX20_01067at 1125.929 kb on + strand, within MPMX20_01067at 1125.961 kb on - strand, within MPMX20_01067at 1126.016 kb on - strand, within MPMX20_01067at 1126.016 kb on - strand, within MPMX20_01067at 1126.074 kb on + strand, within MPMX20_01067at 1126.079 kb on + strand, within MPMX20_01067at 1126.087 kb on - strand, within MPMX20_01067at 1126.087 kb on - strand, within MPMX20_01067at 1126.107 kb on + strand, within MPMX20_01067at 1126.115 kb on - strand, within MPMX20_01067at 1126.116 kb on + strand, within MPMX20_01067at 1126.124 kb on - strand, within MPMX20_01067at 1126.150 kb on + strand, within MPMX20_01067at 1126.205 kb on - strand, within MPMX20_01067at 1126.515 kb on + strand, within MPMX20_01067at 1126.541 kb on + strand, within MPMX20_01067at 1126.547 kb on + strandat 1126.559 kb on + strandat 1126.618 kb on + strandat 1126.629 kb on + strandat 1126.629 kb on + strandat 1126.634 kb on + strandat 1126.637 kb on - strandat 1126.637 kb on - strandat 1126.651 kb on - strandat 1126.658 kb on - strandat 1126.700 kb on - strandat 1126.711 kb on + strandat 1126.713 kb on + strandat 1126.719 kb on - strandat 1126.727 kb on + strandat 1126.787 kb on - strandat 1126.789 kb on + strandat 1126.909 kb on + strand, within MPMX20_01068at 1126.909 kb on + strand, within MPMX20_01068at 1126.917 kb on - strand, within MPMX20_01068at 1126.932 kb on - strand, within MPMX20_01068at 1126.932 kb on - strand, within MPMX20_01068at 1127.007 kb on - strand, within MPMX20_01068at 1127.029 kb on + strand, within MPMX20_01068at 1127.082 kb on + strandat 1127.082 kb on + strandat 1127.082 kb on + strandat 1127.142 kb on + strand, within MPMX20_01069at 1127.142 kb on + strand, within MPMX20_01069at 1127.150 kb on - strand, within MPMX20_01069at 1127.150 kb on - strand, within MPMX20_01069at 1127.351 kb on - strand, within MPMX20_01069at 1127.358 kb on - strand, within MPMX20_01069at 1127.380 kb on + strand, within MPMX20_01069at 1127.437 kb on - strand, within MPMX20_01069at 1127.555 kb on + strandat 1127.696 kb on + strand, within MPMX20_01070at 1127.696 kb on + strand, within MPMX20_01070at 1127.717 kb on + strand, within MPMX20_01070at 1127.759 kb on + strand, within MPMX20_01070at 1127.760 kb on - strand, within MPMX20_01070at 1127.794 kb on + strand, within MPMX20_01070at 1127.868 kb on + strand, within MPMX20_01070at 1127.876 kb on - strand, within MPMX20_01070at 1127.876 kb on - strand, within MPMX20_01070at 1127.971 kb on - strand, within MPMX20_01070at 1128.035 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,125,882 + MPMX20_01067 0.70 -0.8
1,125,900 - MPMX20_01067 0.71 -1.0
1,125,907 + MPMX20_01067 0.71 -1.3
1,125,929 + MPMX20_01067 0.72 -0.5
1,125,961 - MPMX20_01067 0.73 +0.6
1,126,016 - MPMX20_01067 0.74 -1.5
1,126,016 - MPMX20_01067 0.74 -0.0
1,126,074 + MPMX20_01067 0.76 +1.0
1,126,079 + MPMX20_01067 0.76 -1.7
1,126,087 - MPMX20_01067 0.76 +0.8
1,126,087 - MPMX20_01067 0.76 +3.8
1,126,107 + MPMX20_01067 0.77 -1.3
1,126,115 - MPMX20_01067 0.77 -0.4
1,126,116 + MPMX20_01067 0.77 -0.7
1,126,124 - MPMX20_01067 0.78 +2.0
1,126,150 + MPMX20_01067 0.78 -0.8
1,126,205 - MPMX20_01067 0.80 -1.4
1,126,515 + MPMX20_01067 0.89 -1.0
1,126,541 + MPMX20_01067 0.90 +0.8
1,126,547 + -2.3
1,126,559 + -1.5
1,126,618 + +0.3
1,126,629 + -2.5
1,126,629 + -0.7
1,126,634 + +0.9
1,126,637 - +0.2
1,126,637 - +1.8
1,126,651 - +0.1
1,126,658 - -2.1
1,126,700 - -0.5
1,126,711 + -2.1
1,126,713 + +0.5
1,126,719 - -1.3
1,126,727 + +0.5
1,126,787 - +1.2
1,126,789 + +0.2
1,126,909 + MPMX20_01068 0.17 +1.0
1,126,909 + MPMX20_01068 0.17 -1.6
1,126,917 - MPMX20_01068 0.21 -1.7
1,126,932 - MPMX20_01068 0.29 -1.0
1,126,932 - MPMX20_01068 0.29 -1.0
1,127,007 - MPMX20_01068 0.69 -2.1
1,127,029 + MPMX20_01068 0.81 +1.2
1,127,082 + -0.7
1,127,082 + -0.7
1,127,082 + +0.8
1,127,142 + MPMX20_01069 0.12 -1.8
1,127,142 + MPMX20_01069 0.12 -0.9
1,127,150 - MPMX20_01069 0.14 -0.6
1,127,150 - MPMX20_01069 0.14 +1.2
1,127,351 - MPMX20_01069 0.52 -2.2
1,127,358 - MPMX20_01069 0.53 -0.8
1,127,380 + MPMX20_01069 0.58 +0.1
1,127,437 - MPMX20_01069 0.68 -1.2
1,127,555 + -0.2
1,127,696 + MPMX20_01070 0.11 +2.8
1,127,696 + MPMX20_01070 0.11 -2.0
1,127,717 + MPMX20_01070 0.17 -1.0
1,127,759 + MPMX20_01070 0.28 -0.1
1,127,760 - MPMX20_01070 0.28 +0.7
1,127,794 + MPMX20_01070 0.37 -2.1
1,127,868 + MPMX20_01070 0.57 +1.8
1,127,876 - MPMX20_01070 0.59 -0.9
1,127,876 - MPMX20_01070 0.59 -2.9
1,127,971 - MPMX20_01070 0.84 -1.7
1,128,035 - +0.2

Or see this region's nucleotide sequence