Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03327

Experiment: 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03326 and MPMX20_03327 overlap by 4 nucleotidesMPMX20_03327 and MPMX20_03328 are separated by 108 nucleotidesMPMX20_03328 and MPMX20_03329 are separated by 67 nucleotides MPMX20_03326: MPMX20_03326 - Transketolase 2, at 3,494,962 to 3,496,950 _03326 MPMX20_03327: MPMX20_03327 - hypothetical protein, at 3,496,947 to 3,497,990 _03327 MPMX20_03328: MPMX20_03328 - GDP-mannose pyrophosphatase NudK, at 3,498,099 to 3,498,689 _03328 MPMX20_03329: MPMX20_03329 - Ferredoxin--NADP reductase, at 3,498,757 to 3,500,733 _03329 Position (kb) 3496 3497 3498Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3495.980 kb on + strand, within MPMX20_03326at 3495.980 kb on + strand, within MPMX20_03326at 3496.005 kb on + strand, within MPMX20_03326at 3496.029 kb on + strand, within MPMX20_03326at 3496.072 kb on - strand, within MPMX20_03326at 3496.073 kb on + strand, within MPMX20_03326at 3496.130 kb on - strand, within MPMX20_03326at 3496.159 kb on + strand, within MPMX20_03326at 3496.181 kb on + strand, within MPMX20_03326at 3496.189 kb on - strand, within MPMX20_03326at 3496.242 kb on + strand, within MPMX20_03326at 3496.242 kb on + strand, within MPMX20_03326at 3496.242 kb on + strand, within MPMX20_03326at 3496.316 kb on - strand, within MPMX20_03326at 3496.357 kb on + strand, within MPMX20_03326at 3496.365 kb on - strand, within MPMX20_03326at 3496.374 kb on + strand, within MPMX20_03326at 3496.375 kb on - strand, within MPMX20_03326at 3496.384 kb on + strand, within MPMX20_03326at 3496.419 kb on + strand, within MPMX20_03326at 3496.427 kb on - strand, within MPMX20_03326at 3496.435 kb on - strand, within MPMX20_03326at 3496.446 kb on + strand, within MPMX20_03326at 3496.451 kb on + strand, within MPMX20_03326at 3496.516 kb on + strand, within MPMX20_03326at 3496.523 kb on + strand, within MPMX20_03326at 3496.544 kb on + strand, within MPMX20_03326at 3496.730 kb on + strand, within MPMX20_03326at 3496.742 kb on - strand, within MPMX20_03326at 3496.748 kb on - strand, within MPMX20_03326at 3496.957 kb on + strandat 3496.958 kb on + strandat 3497.017 kb on - strandat 3497.110 kb on - strand, within MPMX20_03327at 3497.189 kb on + strand, within MPMX20_03327at 3497.189 kb on + strand, within MPMX20_03327at 3497.189 kb on + strand, within MPMX20_03327at 3497.189 kb on + strand, within MPMX20_03327at 3497.189 kb on + strand, within MPMX20_03327at 3497.189 kb on + strand, within MPMX20_03327at 3497.189 kb on + strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.197 kb on - strand, within MPMX20_03327at 3497.248 kb on + strand, within MPMX20_03327at 3497.338 kb on + strand, within MPMX20_03327at 3497.370 kb on + strand, within MPMX20_03327at 3497.388 kb on + strand, within MPMX20_03327at 3497.425 kb on - strand, within MPMX20_03327at 3497.503 kb on + strand, within MPMX20_03327at 3497.526 kb on - strand, within MPMX20_03327at 3497.569 kb on + strand, within MPMX20_03327at 3497.595 kb on + strand, within MPMX20_03327at 3497.595 kb on + strand, within MPMX20_03327at 3497.595 kb on + strand, within MPMX20_03327at 3497.603 kb on - strand, within MPMX20_03327at 3497.703 kb on + strand, within MPMX20_03327at 3497.797 kb on - strand, within MPMX20_03327at 3497.923 kb on + strandat 3497.929 kb on + strandat 3497.929 kb on + strandat 3497.937 kb on - strandat 3497.937 kb on - strandat 3497.937 kb on - strandat 3497.937 kb on - strandat 3497.937 kb on - strandat 3497.937 kb on - strandat 3497.937 kb on - strandat 3498.025 kb on + strandat 3498.112 kb on - strandat 3498.168 kb on - strand, within MPMX20_03328at 3498.174 kb on + strand, within MPMX20_03328at 3498.328 kb on + strand, within MPMX20_03328at 3498.328 kb on + strand, within MPMX20_03328at 3498.328 kb on + strand, within MPMX20_03328at 3498.336 kb on - strand, within MPMX20_03328at 3498.336 kb on - strand, within MPMX20_03328at 3498.365 kb on + strand, within MPMX20_03328at 3498.399 kb on + strand, within MPMX20_03328at 3498.469 kb on + strand, within MPMX20_03328at 3498.487 kb on + strand, within MPMX20_03328at 3498.495 kb on - strand, within MPMX20_03328at 3498.495 kb on - strand, within MPMX20_03328at 3498.495 kb on - strand, within MPMX20_03328at 3498.495 kb on - strand, within MPMX20_03328at 3498.506 kb on + strand, within MPMX20_03328at 3498.506 kb on + strand, within MPMX20_03328at 3498.514 kb on - strand, within MPMX20_03328at 3498.534 kb on - strand, within MPMX20_03328at 3498.561 kb on + strand, within MPMX20_03328at 3498.561 kb on + strand, within MPMX20_03328at 3498.561 kb on + strand, within MPMX20_03328at 3498.561 kb on + strand, within MPMX20_03328at 3498.561 kb on + strand, within MPMX20_03328at 3498.561 kb on + strand, within MPMX20_03328at 3498.569 kb on - strand, within MPMX20_03328at 3498.569 kb on - strand, within MPMX20_03328at 3498.569 kb on - strand, within MPMX20_03328at 3498.569 kb on - strand, within MPMX20_03328at 3498.569 kb on - strand, within MPMX20_03328at 3498.587 kb on + strand, within MPMX20_03328at 3498.632 kb on + strandat 3498.727 kb on - strandat 3498.780 kb on + strandat 3498.788 kb on - strandat 3498.843 kb on + strandat 3498.851 kb on - strandat 3498.866 kb on - strandat 3498.897 kb on + strandat 3498.981 kb on - strand, within MPMX20_03329

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,495,980 + MPMX20_03326 0.51 +2.1
3,495,980 + MPMX20_03326 0.51 -0.4
3,496,005 + MPMX20_03326 0.52 -0.8
3,496,029 + MPMX20_03326 0.54 -0.6
3,496,072 - MPMX20_03326 0.56 -0.2
3,496,073 + MPMX20_03326 0.56 -0.8
3,496,130 - MPMX20_03326 0.59 -0.1
3,496,159 + MPMX20_03326 0.60 -1.9
3,496,181 + MPMX20_03326 0.61 -0.1
3,496,189 - MPMX20_03326 0.62 +0.4
3,496,242 + MPMX20_03326 0.64 -1.7
3,496,242 + MPMX20_03326 0.64 +3.7
3,496,242 + MPMX20_03326 0.64 -0.6
3,496,316 - MPMX20_03326 0.68 -0.6
3,496,357 + MPMX20_03326 0.70 -0.1
3,496,365 - MPMX20_03326 0.71 -0.2
3,496,374 + MPMX20_03326 0.71 -0.9
3,496,375 - MPMX20_03326 0.71 -0.9
3,496,384 + MPMX20_03326 0.71 -1.0
3,496,419 + MPMX20_03326 0.73 +0.7
3,496,427 - MPMX20_03326 0.74 -0.3
3,496,435 - MPMX20_03326 0.74 +0.9
3,496,446 + MPMX20_03326 0.75 -1.4
3,496,451 + MPMX20_03326 0.75 -0.8
3,496,516 + MPMX20_03326 0.78 +1.7
3,496,523 + MPMX20_03326 0.78 -0.1
3,496,544 + MPMX20_03326 0.80 -2.2
3,496,730 + MPMX20_03326 0.89 -0.3
3,496,742 - MPMX20_03326 0.89 +0.8
3,496,748 - MPMX20_03326 0.90 +0.4
3,496,957 + -0.4
3,496,958 + +0.8
3,497,017 - -0.9
3,497,110 - MPMX20_03327 0.16 +0.1
3,497,189 + MPMX20_03327 0.23 +0.4
3,497,189 + MPMX20_03327 0.23 -0.4
3,497,189 + MPMX20_03327 0.23 +1.7
3,497,189 + MPMX20_03327 0.23 +1.6
3,497,189 + MPMX20_03327 0.23 +0.5
3,497,189 + MPMX20_03327 0.23 +0.4
3,497,189 + MPMX20_03327 0.23 +0.4
3,497,197 - MPMX20_03327 0.24 +1.4
3,497,197 - MPMX20_03327 0.24 +2.1
3,497,197 - MPMX20_03327 0.24 -0.0
3,497,197 - MPMX20_03327 0.24 +0.5
3,497,197 - MPMX20_03327 0.24 -0.9
3,497,197 - MPMX20_03327 0.24 +0.7
3,497,197 - MPMX20_03327 0.24 +0.1
3,497,197 - MPMX20_03327 0.24 -0.3
3,497,197 - MPMX20_03327 0.24 -0.1
3,497,248 + MPMX20_03327 0.29 -0.2
3,497,338 + MPMX20_03327 0.37 -0.7
3,497,370 + MPMX20_03327 0.41 +4.6
3,497,388 + MPMX20_03327 0.42 +1.8
3,497,425 - MPMX20_03327 0.46 -0.6
3,497,503 + MPMX20_03327 0.53 -0.4
3,497,526 - MPMX20_03327 0.55 -0.1
3,497,569 + MPMX20_03327 0.60 -0.4
3,497,595 + MPMX20_03327 0.62 -0.2
3,497,595 + MPMX20_03327 0.62 +0.4
3,497,595 + MPMX20_03327 0.62 +0.4
3,497,603 - MPMX20_03327 0.63 +1.1
3,497,703 + MPMX20_03327 0.72 +0.7
3,497,797 - MPMX20_03327 0.81 -1.4
3,497,923 + +0.5
3,497,929 + -0.9
3,497,929 + -0.2
3,497,937 - +0.8
3,497,937 - -0.5
3,497,937 - -0.1
3,497,937 - -1.7
3,497,937 - -2.6
3,497,937 - +0.4
3,497,937 - -1.9
3,498,025 + -0.3
3,498,112 - +0.7
3,498,168 - MPMX20_03328 0.12 -0.9
3,498,174 + MPMX20_03328 0.13 -0.9
3,498,328 + MPMX20_03328 0.39 -0.2
3,498,328 + MPMX20_03328 0.39 +1.1
3,498,328 + MPMX20_03328 0.39 +0.1
3,498,336 - MPMX20_03328 0.40 +1.7
3,498,336 - MPMX20_03328 0.40 +1.7
3,498,365 + MPMX20_03328 0.45 +0.3
3,498,399 + MPMX20_03328 0.51 +0.3
3,498,469 + MPMX20_03328 0.63 -2.0
3,498,487 + MPMX20_03328 0.66 +0.1
3,498,495 - MPMX20_03328 0.67 -1.1
3,498,495 - MPMX20_03328 0.67 +0.4
3,498,495 - MPMX20_03328 0.67 -1.2
3,498,495 - MPMX20_03328 0.67 -0.6
3,498,506 + MPMX20_03328 0.69 +0.6
3,498,506 + MPMX20_03328 0.69 +1.3
3,498,514 - MPMX20_03328 0.70 +0.4
3,498,534 - MPMX20_03328 0.74 +0.7
3,498,561 + MPMX20_03328 0.78 -1.5
3,498,561 + MPMX20_03328 0.78 +0.8
3,498,561 + MPMX20_03328 0.78 +1.1
3,498,561 + MPMX20_03328 0.78 -1.1
3,498,561 + MPMX20_03328 0.78 +1.6
3,498,561 + MPMX20_03328 0.78 +0.1
3,498,569 - MPMX20_03328 0.80 +0.3
3,498,569 - MPMX20_03328 0.80 +0.5
3,498,569 - MPMX20_03328 0.80 +0.1
3,498,569 - MPMX20_03328 0.80 -1.0
3,498,569 - MPMX20_03328 0.80 -0.5
3,498,587 + MPMX20_03328 0.83 +1.7
3,498,632 + +0.3
3,498,727 - -0.1
3,498,780 + +1.1
3,498,788 - +0.5
3,498,843 + +0.7
3,498,851 - +1.4
3,498,866 - -0.4
3,498,897 + -0.3
3,498,981 - MPMX20_03329 0.11 -0.4

Or see this region's nucleotide sequence