Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03821

Experiment: 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03820 and MPMX20_03821 are separated by 244 nucleotidesMPMX20_03821 and MPMX20_03822 are separated by 18 nucleotidesMPMX20_03822 and MPMX20_03823 overlap by 23 nucleotides MPMX20_03820: MPMX20_03820 - Membrane-bound lytic murein transglycosylase C, at 4,021,670 to 4,022,749 _03820 MPMX20_03821: MPMX20_03821 - Nucleoside permease NupG, at 4,022,994 to 4,024,250 _03821 MPMX20_03822: MPMX20_03822 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 4,024,269 to 4,025,078 _03822 MPMX20_03823: MPMX20_03823 - Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase, at 4,025,056 to 4,025,595 _03823 Position (kb) 4022 4023 4024 4025Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 4022.207 kb on - strand, within MPMX20_03820at 4022.224 kb on + strand, within MPMX20_03820at 4022.232 kb on - strand, within MPMX20_03820at 4022.280 kb on + strand, within MPMX20_03820at 4022.288 kb on - strand, within MPMX20_03820at 4022.366 kb on - strand, within MPMX20_03820at 4022.366 kb on - strand, within MPMX20_03820at 4022.375 kb on + strand, within MPMX20_03820at 4022.383 kb on + strand, within MPMX20_03820at 4022.383 kb on + strand, within MPMX20_03820at 4022.391 kb on - strand, within MPMX20_03820at 4022.391 kb on - strand, within MPMX20_03820at 4022.393 kb on + strand, within MPMX20_03820at 4022.393 kb on + strand, within MPMX20_03820at 4022.393 kb on + strand, within MPMX20_03820at 4022.416 kb on + strand, within MPMX20_03820at 4022.416 kb on + strand, within MPMX20_03820at 4022.416 kb on + strand, within MPMX20_03820at 4022.416 kb on + strand, within MPMX20_03820at 4022.416 kb on + strand, within MPMX20_03820at 4022.424 kb on - strand, within MPMX20_03820at 4022.495 kb on - strand, within MPMX20_03820at 4022.552 kb on - strand, within MPMX20_03820at 4022.586 kb on - strand, within MPMX20_03820at 4022.653 kb on + strandat 4022.751 kb on - strandat 4022.752 kb on + strandat 4022.753 kb on - strandat 4022.757 kb on + strandat 4022.762 kb on + strandat 4022.770 kb on - strandat 4022.770 kb on - strandat 4022.795 kb on - strandat 4022.899 kb on + strandat 4023.071 kb on - strandat 4023.103 kb on - strandat 4023.157 kb on - strand, within MPMX20_03821at 4023.164 kb on + strand, within MPMX20_03821at 4023.232 kb on + strand, within MPMX20_03821at 4023.242 kb on + strand, within MPMX20_03821at 4023.242 kb on + strand, within MPMX20_03821at 4023.242 kb on + strand, within MPMX20_03821at 4023.242 kb on + strand, within MPMX20_03821at 4023.250 kb on - strand, within MPMX20_03821at 4023.250 kb on - strand, within MPMX20_03821at 4023.250 kb on - strand, within MPMX20_03821at 4023.250 kb on - strand, within MPMX20_03821at 4023.250 kb on - strand, within MPMX20_03821at 4023.250 kb on - strand, within MPMX20_03821at 4023.252 kb on + strand, within MPMX20_03821at 4023.278 kb on + strand, within MPMX20_03821at 4023.319 kb on + strand, within MPMX20_03821at 4023.319 kb on + strand, within MPMX20_03821at 4023.327 kb on - strand, within MPMX20_03821at 4023.329 kb on + strand, within MPMX20_03821at 4023.329 kb on + strand, within MPMX20_03821at 4023.329 kb on + strand, within MPMX20_03821at 4023.337 kb on - strand, within MPMX20_03821at 4023.438 kb on + strand, within MPMX20_03821at 4023.438 kb on + strand, within MPMX20_03821at 4023.466 kb on + strand, within MPMX20_03821at 4023.476 kb on + strand, within MPMX20_03821at 4023.487 kb on + strand, within MPMX20_03821at 4023.495 kb on - strand, within MPMX20_03821at 4023.495 kb on - strand, within MPMX20_03821at 4023.527 kb on - strand, within MPMX20_03821at 4023.603 kb on - strand, within MPMX20_03821at 4023.603 kb on - strand, within MPMX20_03821at 4023.663 kb on - strand, within MPMX20_03821at 4023.696 kb on + strand, within MPMX20_03821at 4023.833 kb on + strand, within MPMX20_03821at 4023.851 kb on + strand, within MPMX20_03821at 4024.026 kb on + strand, within MPMX20_03821at 4024.031 kb on + strand, within MPMX20_03821at 4024.063 kb on + strand, within MPMX20_03821at 4024.068 kb on + strand, within MPMX20_03821at 4024.071 kb on - strand, within MPMX20_03821at 4024.085 kb on - strand, within MPMX20_03821at 4024.103 kb on + strand, within MPMX20_03821at 4024.103 kb on + strand, within MPMX20_03821at 4024.170 kb on + strandat 4024.178 kb on - strandat 4024.196 kb on + strandat 4024.204 kb on - strandat 4024.204 kb on - strandat 4024.204 kb on - strandat 4024.265 kb on + strandat 4024.273 kb on - strandat 4024.339 kb on - strandat 4024.367 kb on + strand, within MPMX20_03822at 4024.375 kb on - strand, within MPMX20_03822at 4024.416 kb on + strand, within MPMX20_03822at 4024.416 kb on + strand, within MPMX20_03822at 4024.419 kb on - strand, within MPMX20_03822at 4024.429 kb on - strand, within MPMX20_03822at 4024.459 kb on + strand, within MPMX20_03822at 4024.459 kb on + strand, within MPMX20_03822at 4024.467 kb on + strand, within MPMX20_03822at 4024.493 kb on + strand, within MPMX20_03822at 4024.550 kb on - strand, within MPMX20_03822at 4024.581 kb on + strand, within MPMX20_03822at 4024.615 kb on + strand, within MPMX20_03822at 4024.627 kb on + strand, within MPMX20_03822at 4024.630 kb on - strand, within MPMX20_03822at 4024.660 kb on - strand, within MPMX20_03822at 4024.669 kb on + strand, within MPMX20_03822at 4024.671 kb on - strand, within MPMX20_03822at 4024.671 kb on - strand, within MPMX20_03822at 4024.684 kb on + strand, within MPMX20_03822at 4024.800 kb on - strand, within MPMX20_03822at 4024.859 kb on - strand, within MPMX20_03822at 4024.866 kb on + strand, within MPMX20_03822at 4024.873 kb on - strand, within MPMX20_03822at 4024.874 kb on - strand, within MPMX20_03822at 4024.874 kb on - strand, within MPMX20_03822at 4024.875 kb on - strand, within MPMX20_03822at 4024.877 kb on + strand, within MPMX20_03822at 4024.877 kb on + strand, within MPMX20_03822at 4024.918 kb on - strand, within MPMX20_03822at 4024.968 kb on - strand, within MPMX20_03822at 4024.968 kb on - strand, within MPMX20_03822at 4024.973 kb on - strand, within MPMX20_03822at 4024.982 kb on - strand, within MPMX20_03822at 4025.135 kb on + strand, within MPMX20_03823at 4025.148 kb on - strand, within MPMX20_03823at 4025.148 kb on - strand, within MPMX20_03823at 4025.179 kb on - strand, within MPMX20_03823at 4025.209 kb on + strand, within MPMX20_03823at 4025.214 kb on + strand, within MPMX20_03823at 4025.217 kb on - strand, within MPMX20_03823at 4025.217 kb on - strand, within MPMX20_03823at 4025.222 kb on - strand, within MPMX20_03823

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,022,207 - MPMX20_03820 0.50 -0.4
4,022,224 + MPMX20_03820 0.51 -0.1
4,022,232 - MPMX20_03820 0.52 -0.3
4,022,280 + MPMX20_03820 0.56 +0.2
4,022,288 - MPMX20_03820 0.57 -0.2
4,022,366 - MPMX20_03820 0.64 +0.7
4,022,366 - MPMX20_03820 0.64 -0.3
4,022,375 + MPMX20_03820 0.65 -1.7
4,022,383 + MPMX20_03820 0.66 -1.5
4,022,383 + MPMX20_03820 0.66 +1.3
4,022,391 - MPMX20_03820 0.67 -1.6
4,022,391 - MPMX20_03820 0.67 -0.7
4,022,393 + MPMX20_03820 0.67 +0.7
4,022,393 + MPMX20_03820 0.67 -0.3
4,022,393 + MPMX20_03820 0.67 +0.3
4,022,416 + MPMX20_03820 0.69 -0.3
4,022,416 + MPMX20_03820 0.69 +1.0
4,022,416 + MPMX20_03820 0.69 +1.0
4,022,416 + MPMX20_03820 0.69 -0.5
4,022,416 + MPMX20_03820 0.69 +2.3
4,022,424 - MPMX20_03820 0.70 +0.7
4,022,495 - MPMX20_03820 0.76 +0.4
4,022,552 - MPMX20_03820 0.82 -1.4
4,022,586 - MPMX20_03820 0.85 -0.0
4,022,653 + +0.9
4,022,751 - +0.3
4,022,752 + -0.5
4,022,753 - +0.9
4,022,757 + -0.7
4,022,762 + -1.3
4,022,770 - -0.2
4,022,770 - -0.3
4,022,795 - +0.3
4,022,899 + -1.0
4,023,071 - +1.0
4,023,103 - -0.7
4,023,157 - MPMX20_03821 0.13 -1.0
4,023,164 + MPMX20_03821 0.14 +0.3
4,023,232 + MPMX20_03821 0.19 +0.7
4,023,242 + MPMX20_03821 0.20 +1.3
4,023,242 + MPMX20_03821 0.20 +1.2
4,023,242 + MPMX20_03821 0.20 +0.4
4,023,242 + MPMX20_03821 0.20 -1.0
4,023,250 - MPMX20_03821 0.20 -0.8
4,023,250 - MPMX20_03821 0.20 -0.7
4,023,250 - MPMX20_03821 0.20 +0.1
4,023,250 - MPMX20_03821 0.20 -0.0
4,023,250 - MPMX20_03821 0.20 -1.2
4,023,250 - MPMX20_03821 0.20 +0.4
4,023,252 + MPMX20_03821 0.21 +0.7
4,023,278 + MPMX20_03821 0.23 -1.3
4,023,319 + MPMX20_03821 0.26 -1.7
4,023,319 + MPMX20_03821 0.26 -0.3
4,023,327 - MPMX20_03821 0.26 +0.3
4,023,329 + MPMX20_03821 0.27 -0.2
4,023,329 + MPMX20_03821 0.27 -0.6
4,023,329 + MPMX20_03821 0.27 -0.0
4,023,337 - MPMX20_03821 0.27 -1.1
4,023,438 + MPMX20_03821 0.35 -0.5
4,023,438 + MPMX20_03821 0.35 +0.7
4,023,466 + MPMX20_03821 0.38 -1.6
4,023,476 + MPMX20_03821 0.38 +0.6
4,023,487 + MPMX20_03821 0.39 +1.1
4,023,495 - MPMX20_03821 0.40 -0.5
4,023,495 - MPMX20_03821 0.40 +5.0
4,023,527 - MPMX20_03821 0.42 -1.0
4,023,603 - MPMX20_03821 0.48 -0.5
4,023,603 - MPMX20_03821 0.48 -0.3
4,023,663 - MPMX20_03821 0.53 -0.2
4,023,696 + MPMX20_03821 0.56 -0.7
4,023,833 + MPMX20_03821 0.67 +0.5
4,023,851 + MPMX20_03821 0.68 -2.6
4,024,026 + MPMX20_03821 0.82 +0.7
4,024,031 + MPMX20_03821 0.82 -1.2
4,024,063 + MPMX20_03821 0.85 +0.3
4,024,068 + MPMX20_03821 0.85 -0.3
4,024,071 - MPMX20_03821 0.86 -0.9
4,024,085 - MPMX20_03821 0.87 -0.7
4,024,103 + MPMX20_03821 0.88 -1.2
4,024,103 + MPMX20_03821 0.88 -0.0
4,024,170 + -0.1
4,024,178 - -1.2
4,024,196 + +1.0
4,024,204 - +0.2
4,024,204 - +0.0
4,024,204 - -1.0
4,024,265 + +2.3
4,024,273 - +0.4
4,024,339 - -0.4
4,024,367 + MPMX20_03822 0.12 -2.0
4,024,375 - MPMX20_03822 0.13 +0.3
4,024,416 + MPMX20_03822 0.18 +0.3
4,024,416 + MPMX20_03822 0.18 -0.6
4,024,419 - MPMX20_03822 0.19 -0.9
4,024,429 - MPMX20_03822 0.20 -0.6
4,024,459 + MPMX20_03822 0.23 -0.4
4,024,459 + MPMX20_03822 0.23 -2.7
4,024,467 + MPMX20_03822 0.24 +0.4
4,024,493 + MPMX20_03822 0.28 -0.5
4,024,550 - MPMX20_03822 0.35 +1.9
4,024,581 + MPMX20_03822 0.39 -0.3
4,024,615 + MPMX20_03822 0.43 -0.7
4,024,627 + MPMX20_03822 0.44 +1.5
4,024,630 - MPMX20_03822 0.45 +0.5
4,024,660 - MPMX20_03822 0.48 +1.0
4,024,669 + MPMX20_03822 0.49 +1.9
4,024,671 - MPMX20_03822 0.50 +0.7
4,024,671 - MPMX20_03822 0.50 +0.8
4,024,684 + MPMX20_03822 0.51 +0.9
4,024,800 - MPMX20_03822 0.66 -0.0
4,024,859 - MPMX20_03822 0.73 -1.0
4,024,866 + MPMX20_03822 0.74 +0.8
4,024,873 - MPMX20_03822 0.75 -1.8
4,024,874 - MPMX20_03822 0.75 +0.4
4,024,874 - MPMX20_03822 0.75 -0.4
4,024,875 - MPMX20_03822 0.75 -1.4
4,024,877 + MPMX20_03822 0.75 -0.4
4,024,877 + MPMX20_03822 0.75 +1.5
4,024,918 - MPMX20_03822 0.80 -0.0
4,024,968 - MPMX20_03822 0.86 -0.2
4,024,968 - MPMX20_03822 0.86 -1.0
4,024,973 - MPMX20_03822 0.87 -0.8
4,024,982 - MPMX20_03822 0.88 +0.5
4,025,135 + MPMX20_03823 0.15 +0.3
4,025,148 - MPMX20_03823 0.17 -0.2
4,025,148 - MPMX20_03823 0.17 +2.6
4,025,179 - MPMX20_03823 0.23 +1.5
4,025,209 + MPMX20_03823 0.28 -2.2
4,025,214 + MPMX20_03823 0.29 -0.3
4,025,217 - MPMX20_03823 0.30 -1.2
4,025,217 - MPMX20_03823 0.30 -0.5
4,025,222 - MPMX20_03823 0.31 -0.6

Or see this region's nucleotide sequence