Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03083

Experiment: 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03082 and MPMX20_03083 are separated by 20 nucleotidesMPMX20_03083 and MPMX20_03084 overlap by 4 nucleotides MPMX20_03082: MPMX20_03082 - Adenine deaminase 2, at 3,232,795 to 3,234,525 _03082 MPMX20_03083: MPMX20_03083 - Adenine permease AdeQ, at 3,234,546 to 3,235,889 _03083 MPMX20_03084: MPMX20_03084 - Tyrosine-protein kinase etk, at 3,235,886 to 3,238,084 _03084 Position (kb) 3234 3235 3236Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3233.645 kb on + strand, within MPMX20_03082at 3233.682 kb on + strand, within MPMX20_03082at 3233.713 kb on - strand, within MPMX20_03082at 3233.752 kb on - strand, within MPMX20_03082at 3233.790 kb on - strand, within MPMX20_03082at 3233.795 kb on - strand, within MPMX20_03082at 3233.822 kb on + strand, within MPMX20_03082at 3233.859 kb on - strand, within MPMX20_03082at 3233.881 kb on - strand, within MPMX20_03082at 3233.882 kb on + strand, within MPMX20_03082at 3233.895 kb on - strand, within MPMX20_03082at 3233.922 kb on - strand, within MPMX20_03082at 3233.955 kb on + strand, within MPMX20_03082at 3234.014 kb on - strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.040 kb on - strand, within MPMX20_03082at 3234.040 kb on - strand, within MPMX20_03082at 3234.040 kb on - strand, within MPMX20_03082at 3234.042 kb on + strand, within MPMX20_03082at 3234.104 kb on - strand, within MPMX20_03082at 3234.166 kb on - strand, within MPMX20_03082at 3234.327 kb on + strand, within MPMX20_03082at 3234.335 kb on - strand, within MPMX20_03082at 3234.335 kb on - strand, within MPMX20_03082at 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.514 kb on - strandat 3234.514 kb on - strandat 3234.586 kb on + strandat 3234.586 kb on + strandat 3234.594 kb on - strandat 3234.615 kb on + strandat 3234.699 kb on - strand, within MPMX20_03083at 3234.713 kb on - strand, within MPMX20_03083at 3234.719 kb on + strand, within MPMX20_03083at 3234.753 kb on - strand, within MPMX20_03083at 3234.824 kb on - strand, within MPMX20_03083at 3234.831 kb on + strand, within MPMX20_03083at 3234.836 kb on + strand, within MPMX20_03083at 3234.839 kb on - strand, within MPMX20_03083at 3234.887 kb on + strand, within MPMX20_03083at 3234.931 kb on + strand, within MPMX20_03083at 3234.931 kb on + strand, within MPMX20_03083at 3234.939 kb on - strand, within MPMX20_03083at 3234.948 kb on + strand, within MPMX20_03083at 3234.956 kb on - strand, within MPMX20_03083at 3234.973 kb on + strand, within MPMX20_03083at 3234.981 kb on - strand, within MPMX20_03083at 3234.997 kb on + strand, within MPMX20_03083at 3235.115 kb on + strand, within MPMX20_03083at 3235.169 kb on + strand, within MPMX20_03083at 3235.169 kb on + strand, within MPMX20_03083at 3235.174 kb on + strand, within MPMX20_03083at 3235.177 kb on - strand, within MPMX20_03083at 3235.182 kb on - strand, within MPMX20_03083at 3235.381 kb on + strand, within MPMX20_03083at 3235.586 kb on + strand, within MPMX20_03083at 3235.627 kb on + strand, within MPMX20_03083at 3235.641 kb on - strand, within MPMX20_03083at 3235.670 kb on + strand, within MPMX20_03083at 3235.767 kb on - strandat 3235.778 kb on + strandat 3235.857 kb on + strandat 3235.859 kb on - strandat 3235.865 kb on - strandat 3235.867 kb on - strandat 3235.883 kb on + strandat 3235.884 kb on + strandat 3235.891 kb on - strandat 3235.898 kb on - strandat 3235.898 kb on - strandat 3235.901 kb on + strandat 3235.934 kb on + strandat 3235.934 kb on + strandat 3235.934 kb on + strandat 3235.942 kb on - strandat 3235.942 kb on - strandat 3235.942 kb on - strandat 3235.942 kb on - strandat 3235.942 kb on - strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.947 kb on + strandat 3235.949 kb on + strandat 3235.955 kb on - strandat 3235.955 kb on - strandat 3235.955 kb on - strandat 3235.955 kb on - strandat 3235.955 kb on - strandat 3235.955 kb on - strandat 3235.955 kb on - strandat 3235.957 kb on - strandat 3236.015 kb on - strandat 3236.033 kb on + strandat 3236.118 kb on + strand, within MPMX20_03084at 3236.202 kb on + strand, within MPMX20_03084at 3236.210 kb on - strand, within MPMX20_03084at 3236.210 kb on - strand, within MPMX20_03084at 3236.210 kb on - strand, within MPMX20_03084at 3236.236 kb on - strand, within MPMX20_03084at 3236.264 kb on - strand, within MPMX20_03084at 3236.341 kb on + strand, within MPMX20_03084at 3236.365 kb on - strand, within MPMX20_03084at 3236.451 kb on + strand, within MPMX20_03084at 3236.478 kb on + strand, within MPMX20_03084at 3236.488 kb on + strand, within MPMX20_03084at 3236.488 kb on + strand, within MPMX20_03084at 3236.567 kb on + strand, within MPMX20_03084at 3236.578 kb on + strand, within MPMX20_03084at 3236.582 kb on + strand, within MPMX20_03084at 3236.718 kb on - strand, within MPMX20_03084at 3236.719 kb on + strand, within MPMX20_03084at 3236.723 kb on - strand, within MPMX20_03084at 3236.742 kb on + strand, within MPMX20_03084at 3236.747 kb on + strand, within MPMX20_03084at 3236.749 kb on + strand, within MPMX20_03084at 3236.770 kb on + strand, within MPMX20_03084at 3236.816 kb on + strand, within MPMX20_03084at 3236.863 kb on - strand, within MPMX20_03084

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,233,645 + MPMX20_03082 0.49 +0.1
3,233,682 + MPMX20_03082 0.51 +1.7
3,233,713 - MPMX20_03082 0.53 +1.1
3,233,752 - MPMX20_03082 0.55 -0.7
3,233,790 - MPMX20_03082 0.57 -1.4
3,233,795 - MPMX20_03082 0.58 -0.3
3,233,822 + MPMX20_03082 0.59 +1.7
3,233,859 - MPMX20_03082 0.61 -1.2
3,233,881 - MPMX20_03082 0.63 +1.0
3,233,882 + MPMX20_03082 0.63 +0.3
3,233,895 - MPMX20_03082 0.64 -0.5
3,233,922 - MPMX20_03082 0.65 +0.2
3,233,955 + MPMX20_03082 0.67 +1.3
3,234,014 - MPMX20_03082 0.70 -2.1
3,234,032 + MPMX20_03082 0.71 +0.0
3,234,032 + MPMX20_03082 0.71 -0.4
3,234,032 + MPMX20_03082 0.71 +1.1
3,234,032 + MPMX20_03082 0.71 -0.5
3,234,032 + MPMX20_03082 0.71 +0.2
3,234,040 - MPMX20_03082 0.72 +2.0
3,234,040 - MPMX20_03082 0.72 -0.2
3,234,040 - MPMX20_03082 0.72 +0.4
3,234,042 + MPMX20_03082 0.72 +1.9
3,234,104 - MPMX20_03082 0.76 +0.8
3,234,166 - MPMX20_03082 0.79 -0.7
3,234,327 + MPMX20_03082 0.89 -0.2
3,234,335 - MPMX20_03082 0.89 -0.3
3,234,335 - MPMX20_03082 0.89 +1.0
3,234,443 + -0.7
3,234,443 + +0.2
3,234,443 + -1.0
3,234,443 + -0.9
3,234,443 + +0.0
3,234,443 + -1.4
3,234,443 + -1.2
3,234,443 + +0.0
3,234,451 - +0.0
3,234,451 - -0.2
3,234,451 - +0.0
3,234,451 - +0.7
3,234,451 - -0.6
3,234,451 - +2.3
3,234,451 - -0.3
3,234,514 - -0.3
3,234,514 - +0.9
3,234,586 + -0.8
3,234,586 + +0.5
3,234,594 - -1.6
3,234,615 + -1.1
3,234,699 - MPMX20_03083 0.11 -0.6
3,234,713 - MPMX20_03083 0.12 +0.0
3,234,719 + MPMX20_03083 0.13 +0.0
3,234,753 - MPMX20_03083 0.15 +1.3
3,234,824 - MPMX20_03083 0.21 +0.8
3,234,831 + MPMX20_03083 0.21 -0.5
3,234,836 + MPMX20_03083 0.22 +0.1
3,234,839 - MPMX20_03083 0.22 -1.1
3,234,887 + MPMX20_03083 0.25 -0.7
3,234,931 + MPMX20_03083 0.29 +0.4
3,234,931 + MPMX20_03083 0.29 +0.3
3,234,939 - MPMX20_03083 0.29 -2.5
3,234,948 + MPMX20_03083 0.30 -1.6
3,234,956 - MPMX20_03083 0.31 -1.0
3,234,973 + MPMX20_03083 0.32 +0.3
3,234,981 - MPMX20_03083 0.32 -1.0
3,234,997 + MPMX20_03083 0.34 -0.7
3,235,115 + MPMX20_03083 0.42 -1.4
3,235,169 + MPMX20_03083 0.46 -0.6
3,235,169 + MPMX20_03083 0.46 +0.1
3,235,174 + MPMX20_03083 0.47 -1.1
3,235,177 - MPMX20_03083 0.47 +0.0
3,235,182 - MPMX20_03083 0.47 +1.3
3,235,381 + MPMX20_03083 0.62 -0.6
3,235,586 + MPMX20_03083 0.77 -0.7
3,235,627 + MPMX20_03083 0.80 -0.3
3,235,641 - MPMX20_03083 0.81 +0.7
3,235,670 + MPMX20_03083 0.84 -0.3
3,235,767 - +0.3
3,235,778 + -0.3
3,235,857 + +1.4
3,235,859 - -0.4
3,235,865 - -1.3
3,235,867 - -0.7
3,235,883 + +0.7
3,235,884 + +0.7
3,235,891 - +0.6
3,235,898 - +0.1
3,235,898 - -0.2
3,235,901 + +1.3
3,235,934 + -0.4
3,235,934 + -0.1
3,235,934 + -1.7
3,235,942 - -0.1
3,235,942 - +0.3
3,235,942 - -0.1
3,235,942 - +0.2
3,235,942 - -2.0
3,235,947 + -0.5
3,235,947 + +0.2
3,235,947 + -0.7
3,235,947 + +1.3
3,235,947 + -0.5
3,235,947 + -0.2
3,235,947 + +0.0
3,235,947 + -1.7
3,235,947 + +0.4
3,235,947 + +0.7
3,235,947 + +0.3
3,235,947 + +0.3
3,235,947 + -0.5
3,235,949 + +0.3
3,235,955 - -0.4
3,235,955 - -0.7
3,235,955 - +0.7
3,235,955 - -0.8
3,235,955 - -0.4
3,235,955 - -0.3
3,235,955 - -0.7
3,235,957 - -1.4
3,236,015 - +0.2
3,236,033 + +3.5
3,236,118 + MPMX20_03084 0.11 +1.3
3,236,202 + MPMX20_03084 0.14 -0.6
3,236,210 - MPMX20_03084 0.15 -2.1
3,236,210 - MPMX20_03084 0.15 -0.4
3,236,210 - MPMX20_03084 0.15 +0.3
3,236,236 - MPMX20_03084 0.16 +0.2
3,236,264 - MPMX20_03084 0.17 +0.9
3,236,341 + MPMX20_03084 0.21 +0.7
3,236,365 - MPMX20_03084 0.22 -0.1
3,236,451 + MPMX20_03084 0.26 +0.9
3,236,478 + MPMX20_03084 0.27 -0.3
3,236,488 + MPMX20_03084 0.27 -1.0
3,236,488 + MPMX20_03084 0.27 -1.8
3,236,567 + MPMX20_03084 0.31 -0.5
3,236,578 + MPMX20_03084 0.31 +0.2
3,236,582 + MPMX20_03084 0.32 -0.3
3,236,718 - MPMX20_03084 0.38 +1.0
3,236,719 + MPMX20_03084 0.38 -0.1
3,236,723 - MPMX20_03084 0.38 -0.8
3,236,742 + MPMX20_03084 0.39 +0.6
3,236,747 + MPMX20_03084 0.39 +1.0
3,236,749 + MPMX20_03084 0.39 -0.6
3,236,770 + MPMX20_03084 0.40 -0.8
3,236,816 + MPMX20_03084 0.42 +0.5
3,236,863 - MPMX20_03084 0.44 -0.8

Or see this region's nucleotide sequence