Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02780

Experiment: 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02779 and MPMX20_02780 are separated by 34 nucleotidesMPMX20_02780 and MPMX20_02781 are separated by 4 nucleotides MPMX20_02779: MPMX20_02779 - Arginine--tRNA ligase, at 2,932,603 to 2,934,336 _02779 MPMX20_02780: MPMX20_02780 - Unsaturated rhamnogalacturonyl hydrolase YesR, at 2,934,371 to 2,935,510 _02780 MPMX20_02781: MPMX20_02781 - Putative glycoside/cation symporter YagG, at 2,935,515 to 2,937,098 _02781 Position (kb) 2934 2935 2936Strain fitness (log2 ratio) -2 -1 0 1 2at 2934.404 kb on - strandat 2934.411 kb on + strandat 2934.419 kb on - strandat 2934.419 kb on - strandat 2934.419 kb on - strandat 2934.421 kb on + strandat 2934.429 kb on - strandat 2934.429 kb on - strandat 2934.429 kb on - strandat 2934.478 kb on + strandat 2934.486 kb on - strand, within MPMX20_02780at 2934.559 kb on + strand, within MPMX20_02780at 2934.578 kb on + strand, within MPMX20_02780at 2934.586 kb on - strand, within MPMX20_02780at 2934.642 kb on + strand, within MPMX20_02780at 2934.650 kb on - strand, within MPMX20_02780at 2934.667 kb on + strand, within MPMX20_02780at 2934.667 kb on + strand, within MPMX20_02780at 2934.741 kb on - strand, within MPMX20_02780at 2934.820 kb on - strand, within MPMX20_02780at 2934.926 kb on + strand, within MPMX20_02780at 2934.940 kb on + strand, within MPMX20_02780at 2935.045 kb on + strand, within MPMX20_02780at 2935.097 kb on - strand, within MPMX20_02780at 2935.155 kb on + strand, within MPMX20_02780at 2935.177 kb on + strand, within MPMX20_02780at 2935.215 kb on - strand, within MPMX20_02780at 2935.273 kb on + strand, within MPMX20_02780at 2935.283 kb on - strand, within MPMX20_02780at 2935.293 kb on + strand, within MPMX20_02780at 2935.301 kb on - strand, within MPMX20_02780at 2935.301 kb on - strand, within MPMX20_02780at 2935.301 kb on - strand, within MPMX20_02780at 2935.303 kb on - strand, within MPMX20_02780at 2935.303 kb on - strand, within MPMX20_02780at 2935.319 kb on + strand, within MPMX20_02780at 2935.327 kb on - strand, within MPMX20_02780at 2935.343 kb on - strand, within MPMX20_02780at 2935.391 kb on + strand, within MPMX20_02780at 2935.394 kb on - strand, within MPMX20_02780at 2935.485 kb on - strandat 2935.485 kb on - strandat 2935.487 kb on + strandat 2935.487 kb on + strandat 2935.487 kb on + strandat 2935.495 kb on - strandat 2935.495 kb on - strandat 2935.495 kb on - strandat 2935.520 kb on - strandat 2935.520 kb on - strandat 2935.557 kb on - strandat 2935.567 kb on + strandat 2935.609 kb on + strandat 2935.652 kb on - strandat 2935.659 kb on + strandat 2935.667 kb on - strandat 2935.667 kb on - strandat 2935.731 kb on + strand, within MPMX20_02781at 2935.751 kb on + strand, within MPMX20_02781at 2935.817 kb on + strand, within MPMX20_02781at 2935.833 kb on + strand, within MPMX20_02781at 2935.965 kb on + strand, within MPMX20_02781at 2936.012 kb on - strand, within MPMX20_02781at 2936.012 kb on - strand, within MPMX20_02781at 2936.099 kb on - strand, within MPMX20_02781at 2936.101 kb on + strand, within MPMX20_02781at 2936.101 kb on + strand, within MPMX20_02781at 2936.101 kb on + strand, within MPMX20_02781at 2936.109 kb on - strand, within MPMX20_02781at 2936.114 kb on - strand, within MPMX20_02781at 2936.116 kb on + strand, within MPMX20_02781at 2936.134 kb on + strand, within MPMX20_02781at 2936.246 kb on + strand, within MPMX20_02781at 2936.246 kb on + strand, within MPMX20_02781at 2936.378 kb on + strand, within MPMX20_02781at 2936.380 kb on + strand, within MPMX20_02781at 2936.391 kb on - strand, within MPMX20_02781at 2936.464 kb on - strand, within MPMX20_02781at 2936.500 kb on + strand, within MPMX20_02781

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,934,404 - -0.4
2,934,411 + -1.3
2,934,419 - -0.6
2,934,419 - +0.2
2,934,419 - -0.3
2,934,421 + -0.7
2,934,429 - +1.8
2,934,429 - -0.3
2,934,429 - +0.1
2,934,478 + +0.1
2,934,486 - MPMX20_02780 0.10 -0.5
2,934,559 + MPMX20_02780 0.16 -1.6
2,934,578 + MPMX20_02780 0.18 +1.1
2,934,586 - MPMX20_02780 0.19 -0.0
2,934,642 + MPMX20_02780 0.24 -0.2
2,934,650 - MPMX20_02780 0.24 +1.3
2,934,667 + MPMX20_02780 0.26 -0.6
2,934,667 + MPMX20_02780 0.26 -0.3
2,934,741 - MPMX20_02780 0.32 -2.4
2,934,820 - MPMX20_02780 0.39 +0.1
2,934,926 + MPMX20_02780 0.49 +2.3
2,934,940 + MPMX20_02780 0.50 +0.3
2,935,045 + MPMX20_02780 0.59 +0.3
2,935,097 - MPMX20_02780 0.64 -1.2
2,935,155 + MPMX20_02780 0.69 +1.2
2,935,177 + MPMX20_02780 0.71 -2.2
2,935,215 - MPMX20_02780 0.74 -1.1
2,935,273 + MPMX20_02780 0.79 -0.9
2,935,283 - MPMX20_02780 0.80 +1.3
2,935,293 + MPMX20_02780 0.81 +0.1
2,935,301 - MPMX20_02780 0.82 -1.5
2,935,301 - MPMX20_02780 0.82 +1.0
2,935,301 - MPMX20_02780 0.82 +0.9
2,935,303 - MPMX20_02780 0.82 +1.7
2,935,303 - MPMX20_02780 0.82 -0.9
2,935,319 + MPMX20_02780 0.83 -0.6
2,935,327 - MPMX20_02780 0.84 +0.6
2,935,343 - MPMX20_02780 0.85 -0.7
2,935,391 + MPMX20_02780 0.89 -0.8
2,935,394 - MPMX20_02780 0.90 +0.6
2,935,485 - -1.0
2,935,485 - +1.3
2,935,487 + -0.7
2,935,487 + -1.4
2,935,487 + +1.6
2,935,495 - -1.2
2,935,495 - -0.3
2,935,495 - +0.4
2,935,520 - +0.1
2,935,520 - -0.5
2,935,557 - +1.3
2,935,567 + -1.5
2,935,609 + +0.3
2,935,652 - -0.3
2,935,659 + +0.1
2,935,667 - -0.3
2,935,667 - -0.4
2,935,731 + MPMX20_02781 0.14 -1.4
2,935,751 + MPMX20_02781 0.15 -1.4
2,935,817 + MPMX20_02781 0.19 -0.7
2,935,833 + MPMX20_02781 0.20 -0.6
2,935,965 + MPMX20_02781 0.28 -0.8
2,936,012 - MPMX20_02781 0.31 -1.7
2,936,012 - MPMX20_02781 0.31 -0.3
2,936,099 - MPMX20_02781 0.37 +0.3
2,936,101 + MPMX20_02781 0.37 -0.7
2,936,101 + MPMX20_02781 0.37 +0.5
2,936,101 + MPMX20_02781 0.37 -0.2
2,936,109 - MPMX20_02781 0.38 -0.4
2,936,114 - MPMX20_02781 0.38 -1.1
2,936,116 + MPMX20_02781 0.38 +0.7
2,936,134 + MPMX20_02781 0.39 -0.9
2,936,246 + MPMX20_02781 0.46 -0.0
2,936,246 + MPMX20_02781 0.46 -0.0
2,936,378 + MPMX20_02781 0.54 +0.2
2,936,380 + MPMX20_02781 0.55 +0.2
2,936,391 - MPMX20_02781 0.55 -0.5
2,936,464 - MPMX20_02781 0.60 -0.4
2,936,500 + MPMX20_02781 0.62 -0.3

Or see this region's nucleotide sequence