Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02696

Experiment: 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_02694 and MPMX20_02695 are separated by 37 nucleotidesMPMX20_02695 and MPMX20_02696 are separated by 107 nucleotidesMPMX20_02696 and MPMX20_02697 are separated by 96 nucleotides MPMX20_02694: MPMX20_02694 - Flagellar brake protein YcgR, at 2,847,628 to 2,848,359 _02694 MPMX20_02695: MPMX20_02695 - Endo-type membrane-bound lytic murein transglycosylase A, at 2,848,397 to 2,849,008 _02695 MPMX20_02696: MPMX20_02696 - Murein tetrapeptide carboxypeptidase, at 2,849,116 to 2,850,030 _02696 MPMX20_02697: MPMX20_02697 - K(+)/H(+) antiporter NhaP2, at 2,850,127 to 2,851,860 _02697 Position (kb) 2849 2850 2851Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2848.116 kb on + strand, within MPMX20_02694at 2848.116 kb on + strand, within MPMX20_02694at 2848.116 kb on + strand, within MPMX20_02694at 2848.149 kb on + strand, within MPMX20_02694at 2848.157 kb on - strand, within MPMX20_02694at 2848.157 kb on - strand, within MPMX20_02694at 2848.157 kb on - strand, within MPMX20_02694at 2848.157 kb on - strand, within MPMX20_02694at 2848.196 kb on - strand, within MPMX20_02694at 2848.206 kb on + strand, within MPMX20_02694at 2848.213 kb on - strand, within MPMX20_02694at 2848.297 kb on - strandat 2848.336 kb on - strandat 2848.338 kb on - strandat 2848.338 kb on - strandat 2848.339 kb on - strandat 2848.389 kb on - strandat 2848.500 kb on + strand, within MPMX20_02695at 2848.542 kb on + strand, within MPMX20_02695at 2848.550 kb on - strand, within MPMX20_02695at 2848.600 kb on + strand, within MPMX20_02695at 2848.608 kb on - strand, within MPMX20_02695at 2848.730 kb on - strand, within MPMX20_02695at 2848.763 kb on - strand, within MPMX20_02695at 2848.765 kb on + strand, within MPMX20_02695at 2848.779 kb on - strand, within MPMX20_02695at 2848.865 kb on - strand, within MPMX20_02695at 2848.903 kb on - strand, within MPMX20_02695at 2848.958 kb on + strandat 2849.035 kb on + strandat 2849.070 kb on - strandat 2849.116 kb on - strandat 2849.145 kb on + strandat 2849.171 kb on - strandat 2849.301 kb on + strand, within MPMX20_02696at 2849.340 kb on + strand, within MPMX20_02696at 2849.357 kb on + strand, within MPMX20_02696at 2849.365 kb on - strand, within MPMX20_02696at 2849.377 kb on - strand, within MPMX20_02696at 2849.384 kb on + strand, within MPMX20_02696at 2849.384 kb on + strand, within MPMX20_02696at 2849.392 kb on - strand, within MPMX20_02696at 2849.458 kb on - strand, within MPMX20_02696at 2849.492 kb on + strand, within MPMX20_02696at 2849.500 kb on - strand, within MPMX20_02696at 2849.500 kb on - strand, within MPMX20_02696at 2849.500 kb on - strand, within MPMX20_02696at 2849.666 kb on + strand, within MPMX20_02696at 2849.688 kb on + strand, within MPMX20_02696at 2849.728 kb on + strand, within MPMX20_02696at 2849.741 kb on - strand, within MPMX20_02696at 2849.768 kb on - strand, within MPMX20_02696at 2849.936 kb on + strand, within MPMX20_02696at 2849.942 kb on + strandat 2849.954 kb on + strandat 2850.005 kb on + strandat 2850.059 kb on + strandat 2850.114 kb on + strandat 2850.114 kb on + strandat 2850.116 kb on - strandat 2850.122 kb on - strandat 2850.122 kb on - strandat 2850.122 kb on - strandat 2850.122 kb on - strandat 2850.122 kb on - strandat 2850.139 kb on + strandat 2850.147 kb on - strandat 2850.164 kb on + strandat 2850.164 kb on + strandat 2850.164 kb on + strandat 2850.180 kb on - strandat 2850.316 kb on + strand, within MPMX20_02697at 2850.318 kb on + strand, within MPMX20_02697at 2850.326 kb on - strand, within MPMX20_02697at 2850.326 kb on - strand, within MPMX20_02697at 2850.373 kb on + strand, within MPMX20_02697at 2850.373 kb on + strand, within MPMX20_02697at 2850.377 kb on - strand, within MPMX20_02697at 2850.388 kb on + strand, within MPMX20_02697at 2850.434 kb on + strand, within MPMX20_02697at 2850.434 kb on + strand, within MPMX20_02697at 2850.506 kb on - strand, within MPMX20_02697at 2850.567 kb on - strand, within MPMX20_02697at 2850.650 kb on - strand, within MPMX20_02697at 2850.668 kb on - strand, within MPMX20_02697at 2850.668 kb on - strand, within MPMX20_02697at 2850.678 kb on - strand, within MPMX20_02697at 2850.789 kb on + strand, within MPMX20_02697at 2850.797 kb on - strand, within MPMX20_02697at 2850.797 kb on - strand, within MPMX20_02697at 2850.797 kb on - strand, within MPMX20_02697at 2850.797 kb on - strand, within MPMX20_02697at 2850.869 kb on + strand, within MPMX20_02697at 2850.916 kb on + strand, within MPMX20_02697at 2850.948 kb on + strand, within MPMX20_02697at 2850.948 kb on + strand, within MPMX20_02697at 2850.948 kb on + strand, within MPMX20_02697at 2850.948 kb on + strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.974 kb on + strand, within MPMX20_02697at 2850.974 kb on + strand, within MPMX20_02697at 2851.001 kb on + strand, within MPMX20_02697at 2851.014 kb on + strand, within MPMX20_02697at 2851.030 kb on + strand, within MPMX20_02697

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
remove
2,848,116 + MPMX20_02694 0.67 +0.2
2,848,116 + MPMX20_02694 0.67 +0.4
2,848,116 + MPMX20_02694 0.67 -0.7
2,848,149 + MPMX20_02694 0.71 -1.5
2,848,157 - MPMX20_02694 0.72 +0.6
2,848,157 - MPMX20_02694 0.72 +0.0
2,848,157 - MPMX20_02694 0.72 -0.8
2,848,157 - MPMX20_02694 0.72 +2.8
2,848,196 - MPMX20_02694 0.78 -1.4
2,848,206 + MPMX20_02694 0.79 -0.6
2,848,213 - MPMX20_02694 0.80 +0.1
2,848,297 - +1.1
2,848,336 - +0.2
2,848,338 - -0.3
2,848,338 - +0.4
2,848,339 - -0.2
2,848,389 - -0.4
2,848,500 + MPMX20_02695 0.17 +0.2
2,848,542 + MPMX20_02695 0.24 -0.8
2,848,550 - MPMX20_02695 0.25 +1.1
2,848,600 + MPMX20_02695 0.33 -0.9
2,848,608 - MPMX20_02695 0.34 -1.0
2,848,730 - MPMX20_02695 0.54 +0.8
2,848,763 - MPMX20_02695 0.60 +0.4
2,848,765 + MPMX20_02695 0.60 +0.4
2,848,779 - MPMX20_02695 0.62 -1.1
2,848,865 - MPMX20_02695 0.76 -0.7
2,848,903 - MPMX20_02695 0.83 -0.4
2,848,958 + +0.4
2,849,035 + +0.2
2,849,070 - +1.2
2,849,116 - -1.8
2,849,145 + -4.0
2,849,171 - -3.9
2,849,301 + MPMX20_02696 0.20 -2.7
2,849,340 + MPMX20_02696 0.24 -2.1
2,849,357 + MPMX20_02696 0.26 -2.4
2,849,365 - MPMX20_02696 0.27 -2.9
2,849,377 - MPMX20_02696 0.29 -4.3
2,849,384 + MPMX20_02696 0.29 -3.2
2,849,384 + MPMX20_02696 0.29 -3.7
2,849,392 - MPMX20_02696 0.30 -4.3
2,849,458 - MPMX20_02696 0.37 -2.3
2,849,492 + MPMX20_02696 0.41 -3.3
2,849,500 - MPMX20_02696 0.42 -2.8
2,849,500 - MPMX20_02696 0.42 -3.2
2,849,500 - MPMX20_02696 0.42 -3.4
2,849,666 + MPMX20_02696 0.60 -3.1
2,849,688 + MPMX20_02696 0.63 +0.2
2,849,728 + MPMX20_02696 0.67 -2.4
2,849,741 - MPMX20_02696 0.68 -3.3
2,849,768 - MPMX20_02696 0.71 -0.8
2,849,936 + MPMX20_02696 0.90 -2.5
2,849,942 + -3.3
2,849,954 + -2.1
2,850,005 + +0.5
2,850,059 + -0.6
2,850,114 + -1.8
2,850,114 + -1.7
2,850,116 - -0.7
2,850,122 - -0.9
2,850,122 - -1.3
2,850,122 - -0.6
2,850,122 - +0.1
2,850,122 - -1.6
2,850,139 + +0.7
2,850,147 - -0.8
2,850,164 + -2.2
2,850,164 + -0.8
2,850,164 + -0.0
2,850,180 - -1.7
2,850,316 + MPMX20_02697 0.11 -0.8
2,850,318 + MPMX20_02697 0.11 -0.6
2,850,326 - MPMX20_02697 0.11 +1.2
2,850,326 - MPMX20_02697 0.11 +0.9
2,850,373 + MPMX20_02697 0.14 -0.9
2,850,373 + MPMX20_02697 0.14 +0.3
2,850,377 - MPMX20_02697 0.14 -1.4
2,850,388 + MPMX20_02697 0.15 -0.4
2,850,434 + MPMX20_02697 0.18 -1.1
2,850,434 + MPMX20_02697 0.18 -0.1
2,850,506 - MPMX20_02697 0.22 +1.0
2,850,567 - MPMX20_02697 0.25 +1.5
2,850,650 - MPMX20_02697 0.30 -0.5
2,850,668 - MPMX20_02697 0.31 +1.2
2,850,668 - MPMX20_02697 0.31 +1.0
2,850,678 - MPMX20_02697 0.32 +2.5
2,850,789 + MPMX20_02697 0.38 -0.2
2,850,797 - MPMX20_02697 0.39 -0.1
2,850,797 - MPMX20_02697 0.39 +0.1
2,850,797 - MPMX20_02697 0.39 -1.2
2,850,797 - MPMX20_02697 0.39 -0.1
2,850,869 + MPMX20_02697 0.43 +0.5
2,850,916 + MPMX20_02697 0.46 -0.8
2,850,948 + MPMX20_02697 0.47 +0.4
2,850,948 + MPMX20_02697 0.47 +0.7
2,850,948 + MPMX20_02697 0.47 -0.1
2,850,948 + MPMX20_02697 0.47 -0.3
2,850,956 - MPMX20_02697 0.48 +0.6
2,850,956 - MPMX20_02697 0.48 -0.8
2,850,956 - MPMX20_02697 0.48 -1.1
2,850,956 - MPMX20_02697 0.48 +1.5
2,850,956 - MPMX20_02697 0.48 -0.2
2,850,974 + MPMX20_02697 0.49 +0.5
2,850,974 + MPMX20_02697 0.49 -1.3
2,851,001 + MPMX20_02697 0.50 +0.1
2,851,014 + MPMX20_02697 0.51 -0.2
2,851,030 + MPMX20_02697 0.52 -0.7

Or see this region's nucleotide sequence