Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00511

Experiment: 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00510 and MPMX20_00511 overlap by 14 nucleotidesMPMX20_00511 and MPMX20_00512 are separated by 93 nucleotides MPMX20_00510: MPMX20_00510 - Inner membrane ABC transporter permease protein YtfT, at 527,637 to 528,659 _00510 MPMX20_00511: MPMX20_00511 - Inner membrane ABC transporter permease protein YjfF, at 528,646 to 529,647 _00511 MPMX20_00512: MPMX20_00512 - hypothetical protein, at 529,741 to 531,312 _00512 Position (kb) 528 529 530Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 527.647 kb on - strandat 527.757 kb on - strand, within MPMX20_00510at 527.882 kb on + strand, within MPMX20_00510at 527.973 kb on + strand, within MPMX20_00510at 528.060 kb on - strand, within MPMX20_00510at 528.060 kb on - strand, within MPMX20_00510at 528.108 kb on + strand, within MPMX20_00510at 528.196 kb on + strand, within MPMX20_00510at 528.196 kb on + strand, within MPMX20_00510at 528.196 kb on + strand, within MPMX20_00510at 528.196 kb on + strand, within MPMX20_00510at 528.199 kb on - strand, within MPMX20_00510at 528.199 kb on - strand, within MPMX20_00510at 528.201 kb on + strand, within MPMX20_00510at 528.204 kb on - strand, within MPMX20_00510at 528.204 kb on - strand, within MPMX20_00510at 528.239 kb on - strand, within MPMX20_00510at 528.239 kb on - strand, within MPMX20_00510at 528.276 kb on - strand, within MPMX20_00510at 528.320 kb on - strand, within MPMX20_00510at 528.327 kb on - strand, within MPMX20_00510at 528.455 kb on + strand, within MPMX20_00510at 528.579 kb on + strandat 528.587 kb on - strandat 528.677 kb on + strandat 528.689 kb on - strandat 528.704 kb on - strandat 528.796 kb on + strand, within MPMX20_00511at 528.814 kb on - strand, within MPMX20_00511at 528.862 kb on + strand, within MPMX20_00511at 528.862 kb on + strand, within MPMX20_00511at 528.862 kb on + strand, within MPMX20_00511at 528.870 kb on - strand, within MPMX20_00511at 528.870 kb on - strand, within MPMX20_00511at 528.870 kb on - strand, within MPMX20_00511at 528.961 kb on - strand, within MPMX20_00511at 529.043 kb on - strand, within MPMX20_00511at 529.090 kb on + strand, within MPMX20_00511at 529.092 kb on + strand, within MPMX20_00511at 529.098 kb on - strand, within MPMX20_00511at 529.160 kb on + strand, within MPMX20_00511at 529.186 kb on - strand, within MPMX20_00511at 529.195 kb on - strand, within MPMX20_00511at 529.209 kb on + strand, within MPMX20_00511at 529.209 kb on + strand, within MPMX20_00511at 529.348 kb on + strand, within MPMX20_00511at 529.348 kb on + strand, within MPMX20_00511at 529.349 kb on + strand, within MPMX20_00511at 529.399 kb on - strand, within MPMX20_00511at 529.404 kb on - strand, within MPMX20_00511at 529.438 kb on + strand, within MPMX20_00511at 529.438 kb on + strand, within MPMX20_00511at 529.446 kb on - strand, within MPMX20_00511at 529.446 kb on - strand, within MPMX20_00511at 529.446 kb on - strand, within MPMX20_00511at 529.472 kb on + strand, within MPMX20_00511at 529.477 kb on + strand, within MPMX20_00511at 529.480 kb on - strand, within MPMX20_00511at 529.485 kb on - strand, within MPMX20_00511at 529.485 kb on - strand, within MPMX20_00511at 529.509 kb on + strand, within MPMX20_00511at 529.511 kb on + strand, within MPMX20_00511at 529.574 kb on + strandat 529.582 kb on - strandat 529.582 kb on - strandat 529.582 kb on - strandat 529.582 kb on - strandat 529.584 kb on + strandat 529.609 kb on + strandat 529.609 kb on + strandat 529.609 kb on + strandat 529.617 kb on - strandat 529.617 kb on - strandat 529.628 kb on + strandat 529.786 kb on - strandat 529.790 kb on + strandat 529.798 kb on - strandat 529.865 kb on + strandat 529.868 kb on + strandat 529.875 kb on + strandat 529.875 kb on + strandat 529.875 kb on + strandat 529.875 kb on + strandat 529.875 kb on + strandat 529.875 kb on + strandat 529.875 kb on + strandat 529.875 kb on + strandat 529.883 kb on - strandat 529.883 kb on - strandat 529.883 kb on - strandat 529.883 kb on - strandat 529.883 kb on - strandat 529.899 kb on + strand, within MPMX20_00512at 529.907 kb on - strand, within MPMX20_00512at 529.907 kb on - strand, within MPMX20_00512at 529.907 kb on - strand, within MPMX20_00512at 529.910 kb on + strand, within MPMX20_00512at 529.924 kb on - strand, within MPMX20_00512at 529.980 kb on + strand, within MPMX20_00512at 530.020 kb on - strand, within MPMX20_00512at 530.023 kb on + strand, within MPMX20_00512at 530.023 kb on + strand, within MPMX20_00512at 530.031 kb on - strand, within MPMX20_00512at 530.136 kb on + strand, within MPMX20_00512at 530.138 kb on - strand, within MPMX20_00512at 530.155 kb on + strand, within MPMX20_00512at 530.189 kb on - strand, within MPMX20_00512at 530.281 kb on + strand, within MPMX20_00512at 530.291 kb on - strand, within MPMX20_00512at 530.343 kb on + strand, within MPMX20_00512at 530.354 kb on + strand, within MPMX20_00512at 530.362 kb on + strand, within MPMX20_00512at 530.367 kb on + strand, within MPMX20_00512at 530.372 kb on + strand, within MPMX20_00512at 530.372 kb on + strand, within MPMX20_00512at 530.380 kb on - strand, within MPMX20_00512at 530.380 kb on - strand, within MPMX20_00512at 530.380 kb on - strand, within MPMX20_00512at 530.432 kb on - strand, within MPMX20_00512at 530.476 kb on + strand, within MPMX20_00512at 530.603 kb on + strand, within MPMX20_00512at 530.603 kb on + strand, within MPMX20_00512

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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527,647 - -1.3
527,757 - MPMX20_00510 0.12 +1.2
527,882 + MPMX20_00510 0.24 -0.5
527,973 + MPMX20_00510 0.33 -0.7
528,060 - MPMX20_00510 0.41 +0.2
528,060 - MPMX20_00510 0.41 -0.6
528,108 + MPMX20_00510 0.46 +1.2
528,196 + MPMX20_00510 0.55 -0.2
528,196 + MPMX20_00510 0.55 -2.3
528,196 + MPMX20_00510 0.55 -1.7
528,196 + MPMX20_00510 0.55 +0.9
528,199 - MPMX20_00510 0.55 -1.2
528,199 - MPMX20_00510 0.55 +0.6
528,201 + MPMX20_00510 0.55 -0.1
528,204 - MPMX20_00510 0.55 +1.0
528,204 - MPMX20_00510 0.55 -0.5
528,239 - MPMX20_00510 0.59 -0.4
528,239 - MPMX20_00510 0.59 +0.9
528,276 - MPMX20_00510 0.62 -2.1
528,320 - MPMX20_00510 0.67 -1.5
528,327 - MPMX20_00510 0.67 -1.1
528,455 + MPMX20_00510 0.80 +0.9
528,579 + -1.2
528,587 - -0.4
528,677 + +0.9
528,689 - -1.4
528,704 - -1.1
528,796 + MPMX20_00511 0.15 +0.8
528,814 - MPMX20_00511 0.17 -1.0
528,862 + MPMX20_00511 0.22 -0.4
528,862 + MPMX20_00511 0.22 -0.1
528,862 + MPMX20_00511 0.22 +8.7
528,870 - MPMX20_00511 0.22 +1.2
528,870 - MPMX20_00511 0.22 -0.5
528,870 - MPMX20_00511 0.22 -0.8
528,961 - MPMX20_00511 0.31 +0.6
529,043 - MPMX20_00511 0.40 +0.5
529,090 + MPMX20_00511 0.44 -0.2
529,092 + MPMX20_00511 0.45 +0.2
529,098 - MPMX20_00511 0.45 +0.6
529,160 + MPMX20_00511 0.51 -0.6
529,186 - MPMX20_00511 0.54 -0.1
529,195 - MPMX20_00511 0.55 -0.6
529,209 + MPMX20_00511 0.56 -2.9
529,209 + MPMX20_00511 0.56 -0.1
529,348 + MPMX20_00511 0.70 +0.6
529,348 + MPMX20_00511 0.70 +1.6
529,349 + MPMX20_00511 0.70 +0.7
529,399 - MPMX20_00511 0.75 -0.5
529,404 - MPMX20_00511 0.76 -0.6
529,438 + MPMX20_00511 0.79 +1.6
529,438 + MPMX20_00511 0.79 -1.2
529,446 - MPMX20_00511 0.80 +0.7
529,446 - MPMX20_00511 0.80 -1.2
529,446 - MPMX20_00511 0.80 +0.4
529,472 + MPMX20_00511 0.82 -1.1
529,477 + MPMX20_00511 0.83 +0.2
529,480 - MPMX20_00511 0.83 -1.0
529,485 - MPMX20_00511 0.84 -0.4
529,485 - MPMX20_00511 0.84 -0.5
529,509 + MPMX20_00511 0.86 +0.3
529,511 + MPMX20_00511 0.86 +1.2
529,574 + +0.5
529,582 - -0.6
529,582 - -1.0
529,582 - +2.2
529,582 - -1.3
529,584 + -0.4
529,609 + -1.1
529,609 + -1.1
529,609 + -0.2
529,617 - -0.1
529,617 - -1.1
529,628 + -0.9
529,786 - +1.2
529,790 + +0.6
529,798 - +0.1
529,865 + -0.5
529,868 + -0.2
529,875 + +1.2
529,875 + -1.0
529,875 + -1.4
529,875 + -0.4
529,875 + -1.1
529,875 + +0.4
529,875 + +0.5
529,875 + -0.2
529,883 - -2.0
529,883 - -2.4
529,883 - -1.2
529,883 - -1.5
529,883 - -1.2
529,899 + MPMX20_00512 0.10 -0.8
529,907 - MPMX20_00512 0.11 +0.4
529,907 - MPMX20_00512 0.11 -1.0
529,907 - MPMX20_00512 0.11 +1.6
529,910 + MPMX20_00512 0.11 -0.1
529,924 - MPMX20_00512 0.12 +0.6
529,980 + MPMX20_00512 0.15 +1.6
530,020 - MPMX20_00512 0.18 +1.4
530,023 + MPMX20_00512 0.18 -0.5
530,023 + MPMX20_00512 0.18 +3.7
530,031 - MPMX20_00512 0.18 -0.2
530,136 + MPMX20_00512 0.25 +0.3
530,138 - MPMX20_00512 0.25 -0.6
530,155 + MPMX20_00512 0.26 -1.2
530,189 - MPMX20_00512 0.28 +0.3
530,281 + MPMX20_00512 0.34 +1.9
530,291 - MPMX20_00512 0.35 -1.4
530,343 + MPMX20_00512 0.38 -0.8
530,354 + MPMX20_00512 0.39 +1.2
530,362 + MPMX20_00512 0.40 -0.4
530,367 + MPMX20_00512 0.40 +0.6
530,372 + MPMX20_00512 0.40 -0.4
530,372 + MPMX20_00512 0.40 -0.3
530,380 - MPMX20_00512 0.41 -1.0
530,380 - MPMX20_00512 0.41 +0.3
530,380 - MPMX20_00512 0.41 -0.5
530,432 - MPMX20_00512 0.44 +0.3
530,476 + MPMX20_00512 0.47 -2.6
530,603 + MPMX20_00512 0.55 +0.0
530,603 + MPMX20_00512 0.55 +0.6

Or see this region's nucleotide sequence