Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04538 and MPMX20_04539 are separated by 68 nucleotides MPMX20_04539 and MPMX20_04540 are separated by 92 nucleotides MPMX20_04540 and MPMX20_04541 are separated by 59 nucleotides
MPMX20_04538: MPMX20_04538 - ATP-dependent protease ATPase subunit HslU, at 4,751,583 to 4,752,914
_04538
MPMX20_04539: MPMX20_04539 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase, at 4,752,983 to 4,753,903
_04539
MPMX20_04540: MPMX20_04540 - Regulator of ribonuclease activity A, at 4,753,996 to 4,754,481
_04540
MPMX20_04541: MPMX20_04541 - Cell division protein ZapB, at 4,754,541 to 4,754,780
_04541
Position (kb)
4752
4753
4754 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4752.016 kb on + strand, within MPMX20_04538 at 4752.021 kb on + strand, within MPMX20_04538 at 4752.024 kb on - strand, within MPMX20_04538 at 4752.120 kb on + strand, within MPMX20_04538 at 4752.122 kb on + strand, within MPMX20_04538 at 4752.130 kb on - strand, within MPMX20_04538 at 4752.162 kb on - strand, within MPMX20_04538 at 4752.303 kb on - strand, within MPMX20_04538 at 4752.411 kb on + strand, within MPMX20_04538 at 4752.440 kb on + strand, within MPMX20_04538 at 4752.470 kb on + strand, within MPMX20_04538 at 4752.470 kb on + strand, within MPMX20_04538 at 4752.526 kb on + strand, within MPMX20_04538 at 4752.608 kb on + strand, within MPMX20_04538 at 4752.629 kb on + strand, within MPMX20_04538 at 4752.652 kb on - strand, within MPMX20_04538 at 4752.652 kb on - strand, within MPMX20_04538 at 4752.652 kb on - strand, within MPMX20_04538 at 4752.656 kb on + strand, within MPMX20_04538 at 4752.677 kb on - strand, within MPMX20_04538 at 4752.719 kb on - strand, within MPMX20_04538 at 4752.782 kb on - strand at 4752.891 kb on + strand at 4752.938 kb on + strand at 4752.939 kb on + strand at 4753.004 kb on - strand at 4753.006 kb on + strand at 4753.009 kb on - strand at 4753.014 kb on - strand at 4753.068 kb on + strand at 4753.081 kb on - strand, within MPMX20_04539 at 4753.081 kb on - strand, within MPMX20_04539 at 4753.090 kb on + strand, within MPMX20_04539 at 4753.134 kb on - strand, within MPMX20_04539 at 4753.184 kb on + strand, within MPMX20_04539 at 4753.184 kb on + strand, within MPMX20_04539 at 4753.192 kb on - strand, within MPMX20_04539 at 4753.192 kb on - strand, within MPMX20_04539 at 4753.192 kb on - strand, within MPMX20_04539 at 4753.192 kb on - strand, within MPMX20_04539 at 4753.192 kb on - strand, within MPMX20_04539 at 4753.238 kb on + strand, within MPMX20_04539 at 4753.258 kb on + strand, within MPMX20_04539 at 4753.258 kb on + strand, within MPMX20_04539 at 4753.271 kb on + strand, within MPMX20_04539 at 4753.279 kb on - strand, within MPMX20_04539 at 4753.281 kb on - strand, within MPMX20_04539 at 4753.281 kb on - strand, within MPMX20_04539 at 4753.315 kb on + strand, within MPMX20_04539 at 4753.425 kb on + strand, within MPMX20_04539 at 4753.425 kb on + strand, within MPMX20_04539 at 4753.456 kb on - strand, within MPMX20_04539 at 4753.492 kb on + strand, within MPMX20_04539 at 4753.506 kb on - strand, within MPMX20_04539 at 4753.508 kb on - strand, within MPMX20_04539 at 4753.508 kb on - strand, within MPMX20_04539 at 4753.514 kb on - strand, within MPMX20_04539 at 4753.514 kb on - strand, within MPMX20_04539 at 4753.530 kb on - strand, within MPMX20_04539 at 4753.665 kb on + strand, within MPMX20_04539 at 4753.668 kb on + strand, within MPMX20_04539 at 4753.687 kb on + strand, within MPMX20_04539 at 4753.687 kb on + strand, within MPMX20_04539 at 4753.702 kb on + strand, within MPMX20_04539 at 4753.702 kb on + strand, within MPMX20_04539 at 4753.702 kb on + strand, within MPMX20_04539 at 4753.702 kb on + strand, within MPMX20_04539 at 4753.702 kb on + strand, within MPMX20_04539 at 4753.702 kb on + strand, within MPMX20_04539 at 4753.702 kb on + strand, within MPMX20_04539 at 4753.710 kb on - strand, within MPMX20_04539 at 4753.723 kb on + strand, within MPMX20_04539 at 4753.725 kb on + strand, within MPMX20_04539 at 4753.725 kb on + strand, within MPMX20_04539 at 4753.725 kb on + strand, within MPMX20_04539 at 4753.733 kb on - strand, within MPMX20_04539 at 4753.735 kb on - strand, within MPMX20_04539 at 4753.765 kb on + strand, within MPMX20_04539 at 4753.795 kb on + strand, within MPMX20_04539 at 4753.803 kb on - strand, within MPMX20_04539 at 4753.842 kb on - strand at 4753.880 kb on + strand at 4753.880 kb on + strand at 4753.905 kb on - strand at 4753.972 kb on - strand at 4753.993 kb on - strand at 4754.017 kb on - strand at 4754.017 kb on - strand at 4754.017 kb on - strand at 4754.017 kb on - strand at 4754.136 kb on + strand, within MPMX20_04540 at 4754.144 kb on - strand, within MPMX20_04540 at 4754.204 kb on + strand, within MPMX20_04540 at 4754.214 kb on + strand, within MPMX20_04540 at 4754.242 kb on + strand, within MPMX20_04540 at 4754.253 kb on + strand, within MPMX20_04540 at 4754.271 kb on + strand, within MPMX20_04540 at 4754.277 kb on - strand, within MPMX20_04540 at 4754.281 kb on + strand, within MPMX20_04540 at 4754.364 kb on - strand, within MPMX20_04540 at 4754.404 kb on + strand, within MPMX20_04540 at 4754.444 kb on + strand at 4754.522 kb on - strand at 4754.557 kb on + strand at 4754.559 kb on + strand at 4754.565 kb on - strand, within MPMX20_04541 at 4754.565 kb on - strand, within MPMX20_04541 at 4754.567 kb on - strand, within MPMX20_04541 at 4754.592 kb on + strand, within MPMX20_04541 at 4754.660 kb on - strand, within MPMX20_04541 at 4754.717 kb on + strand, within MPMX20_04541 at 4754.717 kb on + strand, within MPMX20_04541 at 4754.768 kb on + strand at 4754.799 kb on - strand at 4754.812 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,752,016 + MPMX20_04538 0.33 -0.2 4,752,021 + MPMX20_04538 0.33 -1.5 4,752,024 - MPMX20_04538 0.33 +0.0 4,752,120 + MPMX20_04538 0.40 +0.8 4,752,122 + MPMX20_04538 0.40 -0.2 4,752,130 - MPMX20_04538 0.41 -0.4 4,752,162 - MPMX20_04538 0.43 +0.2 4,752,303 - MPMX20_04538 0.54 -0.4 4,752,411 + MPMX20_04538 0.62 -0.8 4,752,440 + MPMX20_04538 0.64 +0.8 4,752,470 + MPMX20_04538 0.67 +0.4 4,752,470 + MPMX20_04538 0.67 -0.5 4,752,526 + MPMX20_04538 0.71 -0.5 4,752,608 + MPMX20_04538 0.77 -1.2 4,752,629 + MPMX20_04538 0.79 -0.9 4,752,652 - MPMX20_04538 0.80 -2.0 4,752,652 - MPMX20_04538 0.80 -0.0 4,752,652 - MPMX20_04538 0.80 -0.4 4,752,656 + MPMX20_04538 0.81 +1.0 4,752,677 - MPMX20_04538 0.82 -0.8 4,752,719 - MPMX20_04538 0.85 -1.9 4,752,782 - +0.7 4,752,891 + -0.3 4,752,938 + -0.4 4,752,939 + -1.6 4,753,004 - -1.1 4,753,006 + -3.0 4,753,009 - -0.3 4,753,014 - -2.0 4,753,068 + +0.0 4,753,081 - MPMX20_04539 0.11 -0.3 4,753,081 - MPMX20_04539 0.11 +2.0 4,753,090 + MPMX20_04539 0.12 -0.2 4,753,134 - MPMX20_04539 0.16 -0.4 4,753,184 + MPMX20_04539 0.22 -1.6 4,753,184 + MPMX20_04539 0.22 +1.4 4,753,192 - MPMX20_04539 0.23 -1.3 4,753,192 - MPMX20_04539 0.23 +0.4 4,753,192 - MPMX20_04539 0.23 -2.2 4,753,192 - MPMX20_04539 0.23 +1.4 4,753,192 - MPMX20_04539 0.23 +1.0 4,753,238 + MPMX20_04539 0.28 +1.4 4,753,258 + MPMX20_04539 0.30 -0.2 4,753,258 + MPMX20_04539 0.30 -0.9 4,753,271 + MPMX20_04539 0.31 +0.4 4,753,279 - MPMX20_04539 0.32 -1.6 4,753,281 - MPMX20_04539 0.32 +0.2 4,753,281 - MPMX20_04539 0.32 -0.3 4,753,315 + MPMX20_04539 0.36 -2.1 4,753,425 + MPMX20_04539 0.48 -0.4 4,753,425 + MPMX20_04539 0.48 +2.0 4,753,456 - MPMX20_04539 0.51 -1.4 4,753,492 + MPMX20_04539 0.55 -1.9 4,753,506 - MPMX20_04539 0.57 +1.4 4,753,508 - MPMX20_04539 0.57 +1.4 4,753,508 - MPMX20_04539 0.57 +0.4 4,753,514 - MPMX20_04539 0.58 +1.0 4,753,514 - MPMX20_04539 0.58 -1.2 4,753,530 - MPMX20_04539 0.59 -1.4 4,753,665 + MPMX20_04539 0.74 +0.7 4,753,668 + MPMX20_04539 0.74 -1.3 4,753,687 + MPMX20_04539 0.76 +1.4 4,753,687 + MPMX20_04539 0.76 -1.8 4,753,702 + MPMX20_04539 0.78 -0.3 4,753,702 + MPMX20_04539 0.78 +1.4 4,753,702 + MPMX20_04539 0.78 -0.5 4,753,702 + MPMX20_04539 0.78 +1.6 4,753,702 + MPMX20_04539 0.78 -0.4 4,753,702 + MPMX20_04539 0.78 -0.2 4,753,702 + MPMX20_04539 0.78 +0.6 4,753,710 - MPMX20_04539 0.79 -1.0 4,753,723 + MPMX20_04539 0.80 -1.6 4,753,725 + MPMX20_04539 0.81 +2.0 4,753,725 + MPMX20_04539 0.81 -1.0 4,753,725 + MPMX20_04539 0.81 +0.4 4,753,733 - MPMX20_04539 0.81 +0.7 4,753,735 - MPMX20_04539 0.82 -1.0 4,753,765 + MPMX20_04539 0.85 -0.6 4,753,795 + MPMX20_04539 0.88 -0.9 4,753,803 - MPMX20_04539 0.89 -2.0 4,753,842 - -0.3 4,753,880 + -0.7 4,753,880 + -0.2 4,753,905 - +3.2 4,753,972 - -0.3 4,753,993 - -0.3 4,754,017 - -1.3 4,754,017 - -1.3 4,754,017 - -0.5 4,754,017 - +0.0 4,754,136 + MPMX20_04540 0.29 -1.6 4,754,144 - MPMX20_04540 0.30 -0.4 4,754,204 + MPMX20_04540 0.43 +3.0 4,754,214 + MPMX20_04540 0.45 +0.1 4,754,242 + MPMX20_04540 0.51 -0.8 4,754,253 + MPMX20_04540 0.53 -0.6 4,754,271 + MPMX20_04540 0.57 +0.4 4,754,277 - MPMX20_04540 0.58 -0.9 4,754,281 + MPMX20_04540 0.59 +0.7 4,754,364 - MPMX20_04540 0.76 -0.6 4,754,404 + MPMX20_04540 0.84 +3.0 4,754,444 + -1.3 4,754,522 - -0.6 4,754,557 + +0.4 4,754,559 + +0.1 4,754,565 - MPMX20_04541 0.10 +2.9 4,754,565 - MPMX20_04541 0.10 -0.4 4,754,567 - MPMX20_04541 0.11 -0.4 4,754,592 + MPMX20_04541 0.21 +1.0 4,754,660 - MPMX20_04541 0.50 -1.6 4,754,717 + MPMX20_04541 0.73 +1.0 4,754,717 + MPMX20_04541 0.73 -0.4 4,754,768 + -0.4 4,754,799 - +1.4 4,754,812 - +0.0
Or see this region's nucleotide sequence