Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04539

Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04538 and MPMX20_04539 are separated by 68 nucleotidesMPMX20_04539 and MPMX20_04540 are separated by 92 nucleotidesMPMX20_04540 and MPMX20_04541 are separated by 59 nucleotides MPMX20_04538: MPMX20_04538 - ATP-dependent protease ATPase subunit HslU, at 4,751,583 to 4,752,914 _04538 MPMX20_04539: MPMX20_04539 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase, at 4,752,983 to 4,753,903 _04539 MPMX20_04540: MPMX20_04540 - Regulator of ribonuclease activity A, at 4,753,996 to 4,754,481 _04540 MPMX20_04541: MPMX20_04541 - Cell division protein ZapB, at 4,754,541 to 4,754,780 _04541 Position (kb) 4752 4753 4754Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4752.016 kb on + strand, within MPMX20_04538at 4752.021 kb on + strand, within MPMX20_04538at 4752.024 kb on - strand, within MPMX20_04538at 4752.120 kb on + strand, within MPMX20_04538at 4752.122 kb on + strand, within MPMX20_04538at 4752.130 kb on - strand, within MPMX20_04538at 4752.162 kb on - strand, within MPMX20_04538at 4752.303 kb on - strand, within MPMX20_04538at 4752.411 kb on + strand, within MPMX20_04538at 4752.440 kb on + strand, within MPMX20_04538at 4752.470 kb on + strand, within MPMX20_04538at 4752.470 kb on + strand, within MPMX20_04538at 4752.526 kb on + strand, within MPMX20_04538at 4752.608 kb on + strand, within MPMX20_04538at 4752.629 kb on + strand, within MPMX20_04538at 4752.652 kb on - strand, within MPMX20_04538at 4752.652 kb on - strand, within MPMX20_04538at 4752.652 kb on - strand, within MPMX20_04538at 4752.656 kb on + strand, within MPMX20_04538at 4752.677 kb on - strand, within MPMX20_04538at 4752.719 kb on - strand, within MPMX20_04538at 4752.782 kb on - strandat 4752.891 kb on + strandat 4752.938 kb on + strandat 4752.939 kb on + strandat 4753.004 kb on - strandat 4753.006 kb on + strandat 4753.009 kb on - strandat 4753.014 kb on - strandat 4753.068 kb on + strandat 4753.081 kb on - strand, within MPMX20_04539at 4753.081 kb on - strand, within MPMX20_04539at 4753.090 kb on + strand, within MPMX20_04539at 4753.134 kb on - strand, within MPMX20_04539at 4753.184 kb on + strand, within MPMX20_04539at 4753.184 kb on + strand, within MPMX20_04539at 4753.192 kb on - strand, within MPMX20_04539at 4753.192 kb on - strand, within MPMX20_04539at 4753.192 kb on - strand, within MPMX20_04539at 4753.192 kb on - strand, within MPMX20_04539at 4753.192 kb on - strand, within MPMX20_04539at 4753.238 kb on + strand, within MPMX20_04539at 4753.258 kb on + strand, within MPMX20_04539at 4753.258 kb on + strand, within MPMX20_04539at 4753.271 kb on + strand, within MPMX20_04539at 4753.279 kb on - strand, within MPMX20_04539at 4753.281 kb on - strand, within MPMX20_04539at 4753.281 kb on - strand, within MPMX20_04539at 4753.315 kb on + strand, within MPMX20_04539at 4753.425 kb on + strand, within MPMX20_04539at 4753.425 kb on + strand, within MPMX20_04539at 4753.456 kb on - strand, within MPMX20_04539at 4753.492 kb on + strand, within MPMX20_04539at 4753.506 kb on - strand, within MPMX20_04539at 4753.508 kb on - strand, within MPMX20_04539at 4753.508 kb on - strand, within MPMX20_04539at 4753.514 kb on - strand, within MPMX20_04539at 4753.514 kb on - strand, within MPMX20_04539at 4753.530 kb on - strand, within MPMX20_04539at 4753.665 kb on + strand, within MPMX20_04539at 4753.668 kb on + strand, within MPMX20_04539at 4753.687 kb on + strand, within MPMX20_04539at 4753.687 kb on + strand, within MPMX20_04539at 4753.702 kb on + strand, within MPMX20_04539at 4753.702 kb on + strand, within MPMX20_04539at 4753.702 kb on + strand, within MPMX20_04539at 4753.702 kb on + strand, within MPMX20_04539at 4753.702 kb on + strand, within MPMX20_04539at 4753.702 kb on + strand, within MPMX20_04539at 4753.702 kb on + strand, within MPMX20_04539at 4753.710 kb on - strand, within MPMX20_04539at 4753.723 kb on + strand, within MPMX20_04539at 4753.725 kb on + strand, within MPMX20_04539at 4753.725 kb on + strand, within MPMX20_04539at 4753.725 kb on + strand, within MPMX20_04539at 4753.733 kb on - strand, within MPMX20_04539at 4753.735 kb on - strand, within MPMX20_04539at 4753.765 kb on + strand, within MPMX20_04539at 4753.795 kb on + strand, within MPMX20_04539at 4753.803 kb on - strand, within MPMX20_04539at 4753.842 kb on - strandat 4753.880 kb on + strandat 4753.880 kb on + strandat 4753.905 kb on - strandat 4753.972 kb on - strandat 4753.993 kb on - strandat 4754.017 kb on - strandat 4754.017 kb on - strandat 4754.017 kb on - strandat 4754.017 kb on - strandat 4754.136 kb on + strand, within MPMX20_04540at 4754.144 kb on - strand, within MPMX20_04540at 4754.204 kb on + strand, within MPMX20_04540at 4754.214 kb on + strand, within MPMX20_04540at 4754.242 kb on + strand, within MPMX20_04540at 4754.253 kb on + strand, within MPMX20_04540at 4754.271 kb on + strand, within MPMX20_04540at 4754.277 kb on - strand, within MPMX20_04540at 4754.281 kb on + strand, within MPMX20_04540at 4754.364 kb on - strand, within MPMX20_04540at 4754.404 kb on + strand, within MPMX20_04540at 4754.444 kb on + strandat 4754.522 kb on - strandat 4754.557 kb on + strandat 4754.559 kb on + strandat 4754.565 kb on - strand, within MPMX20_04541at 4754.565 kb on - strand, within MPMX20_04541at 4754.567 kb on - strand, within MPMX20_04541at 4754.592 kb on + strand, within MPMX20_04541at 4754.660 kb on - strand, within MPMX20_04541at 4754.717 kb on + strand, within MPMX20_04541at 4754.717 kb on + strand, within MPMX20_04541at 4754.768 kb on + strandat 4754.799 kb on - strandat 4754.812 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,752,016 + MPMX20_04538 0.33 -0.2
4,752,021 + MPMX20_04538 0.33 -1.5
4,752,024 - MPMX20_04538 0.33 +0.0
4,752,120 + MPMX20_04538 0.40 +0.8
4,752,122 + MPMX20_04538 0.40 -0.2
4,752,130 - MPMX20_04538 0.41 -0.4
4,752,162 - MPMX20_04538 0.43 +0.2
4,752,303 - MPMX20_04538 0.54 -0.4
4,752,411 + MPMX20_04538 0.62 -0.8
4,752,440 + MPMX20_04538 0.64 +0.8
4,752,470 + MPMX20_04538 0.67 +0.4
4,752,470 + MPMX20_04538 0.67 -0.5
4,752,526 + MPMX20_04538 0.71 -0.5
4,752,608 + MPMX20_04538 0.77 -1.2
4,752,629 + MPMX20_04538 0.79 -0.9
4,752,652 - MPMX20_04538 0.80 -2.0
4,752,652 - MPMX20_04538 0.80 -0.0
4,752,652 - MPMX20_04538 0.80 -0.4
4,752,656 + MPMX20_04538 0.81 +1.0
4,752,677 - MPMX20_04538 0.82 -0.8
4,752,719 - MPMX20_04538 0.85 -1.9
4,752,782 - +0.7
4,752,891 + -0.3
4,752,938 + -0.4
4,752,939 + -1.6
4,753,004 - -1.1
4,753,006 + -3.0
4,753,009 - -0.3
4,753,014 - -2.0
4,753,068 + +0.0
4,753,081 - MPMX20_04539 0.11 -0.3
4,753,081 - MPMX20_04539 0.11 +2.0
4,753,090 + MPMX20_04539 0.12 -0.2
4,753,134 - MPMX20_04539 0.16 -0.4
4,753,184 + MPMX20_04539 0.22 -1.6
4,753,184 + MPMX20_04539 0.22 +1.4
4,753,192 - MPMX20_04539 0.23 -1.3
4,753,192 - MPMX20_04539 0.23 +0.4
4,753,192 - MPMX20_04539 0.23 -2.2
4,753,192 - MPMX20_04539 0.23 +1.4
4,753,192 - MPMX20_04539 0.23 +1.0
4,753,238 + MPMX20_04539 0.28 +1.4
4,753,258 + MPMX20_04539 0.30 -0.2
4,753,258 + MPMX20_04539 0.30 -0.9
4,753,271 + MPMX20_04539 0.31 +0.4
4,753,279 - MPMX20_04539 0.32 -1.6
4,753,281 - MPMX20_04539 0.32 +0.2
4,753,281 - MPMX20_04539 0.32 -0.3
4,753,315 + MPMX20_04539 0.36 -2.1
4,753,425 + MPMX20_04539 0.48 -0.4
4,753,425 + MPMX20_04539 0.48 +2.0
4,753,456 - MPMX20_04539 0.51 -1.4
4,753,492 + MPMX20_04539 0.55 -1.9
4,753,506 - MPMX20_04539 0.57 +1.4
4,753,508 - MPMX20_04539 0.57 +1.4
4,753,508 - MPMX20_04539 0.57 +0.4
4,753,514 - MPMX20_04539 0.58 +1.0
4,753,514 - MPMX20_04539 0.58 -1.2
4,753,530 - MPMX20_04539 0.59 -1.4
4,753,665 + MPMX20_04539 0.74 +0.7
4,753,668 + MPMX20_04539 0.74 -1.3
4,753,687 + MPMX20_04539 0.76 +1.4
4,753,687 + MPMX20_04539 0.76 -1.8
4,753,702 + MPMX20_04539 0.78 -0.3
4,753,702 + MPMX20_04539 0.78 +1.4
4,753,702 + MPMX20_04539 0.78 -0.5
4,753,702 + MPMX20_04539 0.78 +1.6
4,753,702 + MPMX20_04539 0.78 -0.4
4,753,702 + MPMX20_04539 0.78 -0.2
4,753,702 + MPMX20_04539 0.78 +0.6
4,753,710 - MPMX20_04539 0.79 -1.0
4,753,723 + MPMX20_04539 0.80 -1.6
4,753,725 + MPMX20_04539 0.81 +2.0
4,753,725 + MPMX20_04539 0.81 -1.0
4,753,725 + MPMX20_04539 0.81 +0.4
4,753,733 - MPMX20_04539 0.81 +0.7
4,753,735 - MPMX20_04539 0.82 -1.0
4,753,765 + MPMX20_04539 0.85 -0.6
4,753,795 + MPMX20_04539 0.88 -0.9
4,753,803 - MPMX20_04539 0.89 -2.0
4,753,842 - -0.3
4,753,880 + -0.7
4,753,880 + -0.2
4,753,905 - +3.2
4,753,972 - -0.3
4,753,993 - -0.3
4,754,017 - -1.3
4,754,017 - -1.3
4,754,017 - -0.5
4,754,017 - +0.0
4,754,136 + MPMX20_04540 0.29 -1.6
4,754,144 - MPMX20_04540 0.30 -0.4
4,754,204 + MPMX20_04540 0.43 +3.0
4,754,214 + MPMX20_04540 0.45 +0.1
4,754,242 + MPMX20_04540 0.51 -0.8
4,754,253 + MPMX20_04540 0.53 -0.6
4,754,271 + MPMX20_04540 0.57 +0.4
4,754,277 - MPMX20_04540 0.58 -0.9
4,754,281 + MPMX20_04540 0.59 +0.7
4,754,364 - MPMX20_04540 0.76 -0.6
4,754,404 + MPMX20_04540 0.84 +3.0
4,754,444 + -1.3
4,754,522 - -0.6
4,754,557 + +0.4
4,754,559 + +0.1
4,754,565 - MPMX20_04541 0.10 +2.9
4,754,565 - MPMX20_04541 0.10 -0.4
4,754,567 - MPMX20_04541 0.11 -0.4
4,754,592 + MPMX20_04541 0.21 +1.0
4,754,660 - MPMX20_04541 0.50 -1.6
4,754,717 + MPMX20_04541 0.73 +1.0
4,754,717 + MPMX20_04541 0.73 -0.4
4,754,768 + -0.4
4,754,799 - +1.4
4,754,812 - +0.0

Or see this region's nucleotide sequence