Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04018

Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04016 and MPMX20_04017 are separated by 262 nucleotidesMPMX20_04017 and MPMX20_04018 are separated by 151 nucleotidesMPMX20_04018 and MPMX20_04019 are separated by 15 nucleotides MPMX20_04016: MPMX20_04016 - putative serine transporter, at 4,211,344 to 4,212,675 _04016 MPMX20_04017: MPMX20_04017 - hypothetical protein, at 4,212,938 to 4,213,348 _04017 MPMX20_04018: MPMX20_04018 - PFL-like enzyme TdcE, at 4,213,500 to 4,215,794 _04018 MPMX20_04019: MPMX20_04019 - Propionate kinase, at 4,215,810 to 4,217,018 _04019 Position (kb) 4213 4214 4215 4216Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4212.504 kb on - strand, within MPMX20_04016at 4212.567 kb on - strandat 4212.620 kb on - strandat 4212.620 kb on - strandat 4212.632 kb on + strandat 4212.653 kb on - strandat 4212.783 kb on - strandat 4212.939 kb on + strandat 4212.939 kb on + strandat 4212.975 kb on + strandat 4212.993 kb on - strand, within MPMX20_04017at 4213.075 kb on + strand, within MPMX20_04017at 4213.096 kb on - strand, within MPMX20_04017at 4213.115 kb on - strand, within MPMX20_04017at 4213.187 kb on - strand, within MPMX20_04017at 4213.222 kb on + strand, within MPMX20_04017at 4213.230 kb on - strand, within MPMX20_04017at 4213.230 kb on - strand, within MPMX20_04017at 4213.266 kb on + strand, within MPMX20_04017at 4213.274 kb on - strand, within MPMX20_04017at 4213.274 kb on - strand, within MPMX20_04017at 4213.296 kb on + strand, within MPMX20_04017at 4213.303 kb on + strand, within MPMX20_04017at 4213.306 kb on - strand, within MPMX20_04017at 4213.479 kb on - strandat 4213.505 kb on - strandat 4213.505 kb on - strandat 4213.606 kb on - strandat 4213.608 kb on + strandat 4213.662 kb on - strandat 4213.662 kb on - strandat 4213.673 kb on + strandat 4213.685 kb on - strandat 4213.744 kb on + strand, within MPMX20_04018at 4213.750 kb on + strand, within MPMX20_04018at 4213.751 kb on - strand, within MPMX20_04018at 4213.752 kb on - strand, within MPMX20_04018at 4213.752 kb on - strand, within MPMX20_04018at 4213.758 kb on - strand, within MPMX20_04018at 4213.776 kb on + strand, within MPMX20_04018at 4213.782 kb on + strand, within MPMX20_04018at 4213.789 kb on - strand, within MPMX20_04018at 4213.791 kb on - strand, within MPMX20_04018at 4213.817 kb on - strand, within MPMX20_04018at 4213.840 kb on - strand, within MPMX20_04018at 4213.841 kb on - strand, within MPMX20_04018at 4213.841 kb on - strand, within MPMX20_04018at 4213.898 kb on + strand, within MPMX20_04018at 4213.973 kb on - strand, within MPMX20_04018at 4213.980 kb on + strand, within MPMX20_04018at 4213.980 kb on + strand, within MPMX20_04018at 4213.988 kb on - strand, within MPMX20_04018at 4213.991 kb on + strand, within MPMX20_04018at 4214.001 kb on + strand, within MPMX20_04018at 4214.073 kb on + strand, within MPMX20_04018at 4214.164 kb on + strand, within MPMX20_04018at 4214.236 kb on - strand, within MPMX20_04018at 4214.250 kb on + strand, within MPMX20_04018at 4214.263 kb on + strand, within MPMX20_04018at 4214.273 kb on - strand, within MPMX20_04018at 4214.305 kb on + strand, within MPMX20_04018at 4214.305 kb on + strand, within MPMX20_04018at 4214.318 kb on + strand, within MPMX20_04018at 4214.318 kb on - strand, within MPMX20_04018at 4214.326 kb on - strand, within MPMX20_04018at 4214.463 kb on + strand, within MPMX20_04018at 4214.476 kb on - strand, within MPMX20_04018at 4214.565 kb on + strand, within MPMX20_04018at 4214.586 kb on + strand, within MPMX20_04018at 4214.594 kb on - strand, within MPMX20_04018at 4214.596 kb on - strand, within MPMX20_04018at 4214.615 kb on + strand, within MPMX20_04018at 4214.623 kb on - strand, within MPMX20_04018at 4214.681 kb on + strand, within MPMX20_04018at 4214.695 kb on - strand, within MPMX20_04018at 4214.738 kb on + strand, within MPMX20_04018at 4214.970 kb on - strand, within MPMX20_04018at 4215.014 kb on + strand, within MPMX20_04018at 4215.092 kb on + strand, within MPMX20_04018at 4215.160 kb on + strand, within MPMX20_04018at 4215.296 kb on + strand, within MPMX20_04018at 4215.362 kb on + strand, within MPMX20_04018at 4215.402 kb on + strand, within MPMX20_04018at 4215.402 kb on + strand, within MPMX20_04018at 4215.402 kb on + strand, within MPMX20_04018at 4215.410 kb on - strand, within MPMX20_04018at 4215.444 kb on + strand, within MPMX20_04018at 4215.463 kb on - strand, within MPMX20_04018at 4215.468 kb on - strand, within MPMX20_04018at 4215.470 kb on + strand, within MPMX20_04018at 4215.478 kb on - strand, within MPMX20_04018at 4215.522 kb on - strand, within MPMX20_04018at 4215.546 kb on + strand, within MPMX20_04018at 4215.605 kb on + strandat 4215.605 kb on + strandat 4215.611 kb on + strandat 4215.613 kb on - strandat 4215.613 kb on - strandat 4215.613 kb on - strandat 4215.613 kb on - strandat 4215.677 kb on + strandat 4215.677 kb on + strandat 4215.682 kb on + strandat 4215.682 kb on + strandat 4215.685 kb on - strandat 4215.685 kb on - strandat 4215.685 kb on - strandat 4215.815 kb on - strandat 4215.815 kb on - strandat 4215.821 kb on - strandat 4215.845 kb on + strandat 4215.935 kb on + strand, within MPMX20_04019at 4215.935 kb on + strand, within MPMX20_04019at 4215.935 kb on + strand, within MPMX20_04019at 4215.943 kb on - strand, within MPMX20_04019at 4215.943 kb on - strand, within MPMX20_04019at 4215.943 kb on - strand, within MPMX20_04019at 4215.948 kb on - strand, within MPMX20_04019at 4215.968 kb on + strand, within MPMX20_04019at 4216.017 kb on + strand, within MPMX20_04019at 4216.029 kb on + strand, within MPMX20_04019at 4216.032 kb on - strand, within MPMX20_04019at 4216.048 kb on + strand, within MPMX20_04019at 4216.055 kb on - strand, within MPMX20_04019at 4216.060 kb on - strand, within MPMX20_04019at 4216.070 kb on - strand, within MPMX20_04019at 4216.071 kb on + strand, within MPMX20_04019at 4216.071 kb on + strand, within MPMX20_04019at 4216.079 kb on - strand, within MPMX20_04019at 4216.159 kb on + strand, within MPMX20_04019at 4216.192 kb on - strand, within MPMX20_04019at 4216.192 kb on - strand, within MPMX20_04019at 4216.212 kb on - strand, within MPMX20_04019at 4216.276 kb on + strand, within MPMX20_04019at 4216.281 kb on + strand, within MPMX20_04019at 4216.284 kb on - strand, within MPMX20_04019at 4216.284 kb on - strand, within MPMX20_04019at 4216.284 kb on - strand, within MPMX20_04019at 4216.284 kb on - strand, within MPMX20_04019at 4216.284 kb on - strand, within MPMX20_04019at 4216.284 kb on - strand, within MPMX20_04019at 4216.312 kb on - strand, within MPMX20_04019at 4216.331 kb on - strand, within MPMX20_04019at 4216.349 kb on + strand, within MPMX20_04019at 4216.349 kb on + strand, within MPMX20_04019at 4216.362 kb on - strand, within MPMX20_04019at 4216.426 kb on - strand, within MPMX20_04019at 4216.431 kb on + strand, within MPMX20_04019at 4216.484 kb on + strand, within MPMX20_04019at 4216.509 kb on - strand, within MPMX20_04019at 4216.509 kb on - strand, within MPMX20_04019at 4216.588 kb on + strand, within MPMX20_04019at 4216.626 kb on + strand, within MPMX20_04019at 4216.716 kb on + strand, within MPMX20_04019at 4216.750 kb on - strand, within MPMX20_04019at 4216.775 kb on + strand, within MPMX20_04019at 4216.775 kb on + strand, within MPMX20_04019at 4216.793 kb on + strand, within MPMX20_04019

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,212,504 - MPMX20_04016 0.87 +0.7
4,212,567 - -0.7
4,212,620 - +0.5
4,212,620 - -1.3
4,212,632 + -1.3
4,212,653 - +1.8
4,212,783 - -0.1
4,212,939 + -1.7
4,212,939 + -1.5
4,212,975 + -1.1
4,212,993 - MPMX20_04017 0.13 -0.6
4,213,075 + MPMX20_04017 0.33 +1.0
4,213,096 - MPMX20_04017 0.38 -0.5
4,213,115 - MPMX20_04017 0.43 -0.5
4,213,187 - MPMX20_04017 0.61 -1.5
4,213,222 + MPMX20_04017 0.69 -1.6
4,213,230 - MPMX20_04017 0.71 -1.2
4,213,230 - MPMX20_04017 0.71 +0.5
4,213,266 + MPMX20_04017 0.80 -1.6
4,213,274 - MPMX20_04017 0.82 +0.8
4,213,274 - MPMX20_04017 0.82 +0.5
4,213,296 + MPMX20_04017 0.87 -1.5
4,213,303 + MPMX20_04017 0.89 -0.7
4,213,306 - MPMX20_04017 0.90 +1.8
4,213,479 - +0.8
4,213,505 - -0.3
4,213,505 - -0.9
4,213,606 - -1.3
4,213,608 + -1.0
4,213,662 - -0.4
4,213,662 - -0.2
4,213,673 + -0.1
4,213,685 - -0.9
4,213,744 + MPMX20_04018 0.11 +3.8
4,213,750 + MPMX20_04018 0.11 +0.4
4,213,751 - MPMX20_04018 0.11 -0.9
4,213,752 - MPMX20_04018 0.11 +0.4
4,213,752 - MPMX20_04018 0.11 -0.9
4,213,758 - MPMX20_04018 0.11 +0.1
4,213,776 + MPMX20_04018 0.12 +0.5
4,213,782 + MPMX20_04018 0.12 +0.8
4,213,789 - MPMX20_04018 0.13 -1.3
4,213,791 - MPMX20_04018 0.13 +1.8
4,213,817 - MPMX20_04018 0.14 -0.6
4,213,840 - MPMX20_04018 0.15 -1.1
4,213,841 - MPMX20_04018 0.15 +1.9
4,213,841 - MPMX20_04018 0.15 -0.3
4,213,898 + MPMX20_04018 0.17 -1.2
4,213,973 - MPMX20_04018 0.21 +2.8
4,213,980 + MPMX20_04018 0.21 +1.3
4,213,980 + MPMX20_04018 0.21 +1.8
4,213,988 - MPMX20_04018 0.21 -1.0
4,213,991 + MPMX20_04018 0.21 +0.3
4,214,001 + MPMX20_04018 0.22 -1.3
4,214,073 + MPMX20_04018 0.25 -1.1
4,214,164 + MPMX20_04018 0.29 -0.3
4,214,236 - MPMX20_04018 0.32 -1.0
4,214,250 + MPMX20_04018 0.33 -0.3
4,214,263 + MPMX20_04018 0.33 +0.8
4,214,273 - MPMX20_04018 0.34 +1.8
4,214,305 + MPMX20_04018 0.35 +1.6
4,214,305 + MPMX20_04018 0.35 -1.6
4,214,318 + MPMX20_04018 0.36 -1.5
4,214,318 - MPMX20_04018 0.36 -1.4
4,214,326 - MPMX20_04018 0.36 -0.9
4,214,463 + MPMX20_04018 0.42 -3.2
4,214,476 - MPMX20_04018 0.43 -0.3
4,214,565 + MPMX20_04018 0.46 +0.1
4,214,586 + MPMX20_04018 0.47 -0.9
4,214,594 - MPMX20_04018 0.48 -0.9
4,214,596 - MPMX20_04018 0.48 -0.9
4,214,615 + MPMX20_04018 0.49 -0.2
4,214,623 - MPMX20_04018 0.49 -1.3
4,214,681 + MPMX20_04018 0.51 +1.8
4,214,695 - MPMX20_04018 0.52 -1.2
4,214,738 + MPMX20_04018 0.54 +0.3
4,214,970 - MPMX20_04018 0.64 -1.3
4,215,014 + MPMX20_04018 0.66 -1.3
4,215,092 + MPMX20_04018 0.69 -0.8
4,215,160 + MPMX20_04018 0.72 +0.2
4,215,296 + MPMX20_04018 0.78 -0.2
4,215,362 + MPMX20_04018 0.81 +0.8
4,215,402 + MPMX20_04018 0.83 +1.4
4,215,402 + MPMX20_04018 0.83 -0.1
4,215,402 + MPMX20_04018 0.83 -0.0
4,215,410 - MPMX20_04018 0.83 -1.4
4,215,444 + MPMX20_04018 0.85 -1.7
4,215,463 - MPMX20_04018 0.86 -0.7
4,215,468 - MPMX20_04018 0.86 +0.0
4,215,470 + MPMX20_04018 0.86 +2.3
4,215,478 - MPMX20_04018 0.86 +1.3
4,215,522 - MPMX20_04018 0.88 +1.7
4,215,546 + MPMX20_04018 0.89 -0.2
4,215,605 + -0.4
4,215,605 + -0.9
4,215,611 + +0.1
4,215,613 - -1.2
4,215,613 - -0.2
4,215,613 - -1.7
4,215,613 - -0.4
4,215,677 + -0.3
4,215,677 + -1.0
4,215,682 + +1.4
4,215,682 + -1.2
4,215,685 - -0.7
4,215,685 - +0.0
4,215,685 - -0.8
4,215,815 - +1.8
4,215,815 - -0.3
4,215,821 - -0.7
4,215,845 + -2.2
4,215,935 + MPMX20_04019 0.10 -1.4
4,215,935 + MPMX20_04019 0.10 +2.4
4,215,935 + MPMX20_04019 0.10 -1.9
4,215,943 - MPMX20_04019 0.11 +0.3
4,215,943 - MPMX20_04019 0.11 +0.7
4,215,943 - MPMX20_04019 0.11 -0.1
4,215,948 - MPMX20_04019 0.11 +0.5
4,215,968 + MPMX20_04019 0.13 +0.3
4,216,017 + MPMX20_04019 0.17 -0.3
4,216,029 + MPMX20_04019 0.18 +0.8
4,216,032 - MPMX20_04019 0.18 +1.5
4,216,048 + MPMX20_04019 0.20 -0.1
4,216,055 - MPMX20_04019 0.20 -0.2
4,216,060 - MPMX20_04019 0.21 +0.5
4,216,070 - MPMX20_04019 0.22 -0.9
4,216,071 + MPMX20_04019 0.22 -2.7
4,216,071 + MPMX20_04019 0.22 -2.8
4,216,079 - MPMX20_04019 0.22 -1.6
4,216,159 + MPMX20_04019 0.29 -0.2
4,216,192 - MPMX20_04019 0.32 -0.2
4,216,192 - MPMX20_04019 0.32 -0.9
4,216,212 - MPMX20_04019 0.33 -0.0
4,216,276 + MPMX20_04019 0.39 -1.2
4,216,281 + MPMX20_04019 0.39 -1.0
4,216,284 - MPMX20_04019 0.39 -0.8
4,216,284 - MPMX20_04019 0.39 -0.6
4,216,284 - MPMX20_04019 0.39 +2.8
4,216,284 - MPMX20_04019 0.39 +1.8
4,216,284 - MPMX20_04019 0.39 -1.7
4,216,284 - MPMX20_04019 0.39 -0.5
4,216,312 - MPMX20_04019 0.42 -1.0
4,216,331 - MPMX20_04019 0.43 -0.7
4,216,349 + MPMX20_04019 0.45 -0.2
4,216,349 + MPMX20_04019 0.45 -1.2
4,216,362 - MPMX20_04019 0.46 -0.4
4,216,426 - MPMX20_04019 0.51 -0.2
4,216,431 + MPMX20_04019 0.51 -1.2
4,216,484 + MPMX20_04019 0.56 -1.9
4,216,509 - MPMX20_04019 0.58 +1.1
4,216,509 - MPMX20_04019 0.58 +0.4
4,216,588 + MPMX20_04019 0.64 +0.5
4,216,626 + MPMX20_04019 0.67 -1.0
4,216,716 + MPMX20_04019 0.75 +2.8
4,216,750 - MPMX20_04019 0.78 +0.3
4,216,775 + MPMX20_04019 0.80 -1.3
4,216,775 + MPMX20_04019 0.80 -1.2
4,216,793 + MPMX20_04019 0.81 -0.2

Or see this region's nucleotide sequence