Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03371 and MPMX20_03372 are separated by 54 nucleotides MPMX20_03372 and MPMX20_03373 are separated by 31 nucleotides
MPMX20_03371: MPMX20_03371 - Ribose import ATP-binding protein RbsA, at 3,547,935 to 3,549,482
_03371
MPMX20_03372: MPMX20_03372 - Ribose import binding protein RbsB, at 3,549,537 to 3,550,466
_03372
MPMX20_03373: MPMX20_03373 - Myo-inositol 2-dehydrogenase, at 3,550,498 to 3,551,484
_03373
Position (kb)
3549
3550
3551 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3548.571 kb on + strand, within MPMX20_03371 at 3548.575 kb on + strand, within MPMX20_03371 at 3548.585 kb on + strand, within MPMX20_03371 at 3548.595 kb on + strand, within MPMX20_03371 at 3548.595 kb on + strand, within MPMX20_03371 at 3548.603 kb on + strand, within MPMX20_03371 at 3548.603 kb on - strand, within MPMX20_03371 at 3548.603 kb on - strand, within MPMX20_03371 at 3548.618 kb on + strand, within MPMX20_03371 at 3548.626 kb on - strand, within MPMX20_03371 at 3548.639 kb on + strand, within MPMX20_03371 at 3548.639 kb on + strand, within MPMX20_03371 at 3548.639 kb on + strand, within MPMX20_03371 at 3548.639 kb on + strand, within MPMX20_03371 at 3548.647 kb on - strand, within MPMX20_03371 at 3548.647 kb on - strand, within MPMX20_03371 at 3548.647 kb on - strand, within MPMX20_03371 at 3548.647 kb on - strand, within MPMX20_03371 at 3548.647 kb on - strand, within MPMX20_03371 at 3548.647 kb on - strand, within MPMX20_03371 at 3548.647 kb on - strand, within MPMX20_03371 at 3548.647 kb on - strand, within MPMX20_03371 at 3548.948 kb on + strand, within MPMX20_03371 at 3548.948 kb on - strand, within MPMX20_03371 at 3548.974 kb on + strand, within MPMX20_03371 at 3548.993 kb on + strand, within MPMX20_03371 at 3549.030 kb on - strand, within MPMX20_03371 at 3549.064 kb on + strand, within MPMX20_03371 at 3549.065 kb on - strand, within MPMX20_03371 at 3549.087 kb on - strand, within MPMX20_03371 at 3549.105 kb on + strand, within MPMX20_03371 at 3549.159 kb on - strand, within MPMX20_03371 at 3549.161 kb on + strand, within MPMX20_03371 at 3549.161 kb on + strand, within MPMX20_03371 at 3549.169 kb on - strand, within MPMX20_03371 at 3549.169 kb on - strand, within MPMX20_03371 at 3549.174 kb on - strand, within MPMX20_03371 at 3549.334 kb on + strand at 3549.334 kb on + strand at 3549.342 kb on - strand at 3549.379 kb on + strand at 3549.407 kb on + strand at 3549.407 kb on + strand at 3549.407 kb on + strand at 3549.407 kb on + strand at 3549.425 kb on - strand at 3549.425 kb on - strand at 3549.471 kb on + strand at 3549.471 kb on + strand at 3549.479 kb on - strand at 3549.479 kb on - strand at 3549.479 kb on - strand at 3549.480 kb on - strand at 3549.487 kb on - strand at 3549.495 kb on + strand at 3549.495 kb on + strand at 3549.503 kb on - strand at 3549.507 kb on + strand at 3549.508 kb on - strand at 3549.598 kb on + strand at 3549.644 kb on - strand, within MPMX20_03372 at 3549.784 kb on + strand, within MPMX20_03372 at 3549.839 kb on + strand, within MPMX20_03372 at 3549.840 kb on + strand, within MPMX20_03372 at 3549.847 kb on - strand, within MPMX20_03372 at 3549.896 kb on + strand, within MPMX20_03372 at 3549.934 kb on + strand, within MPMX20_03372 at 3549.956 kb on + strand, within MPMX20_03372 at 3549.956 kb on + strand, within MPMX20_03372 at 3549.984 kb on - strand, within MPMX20_03372 at 3550.084 kb on + strand, within MPMX20_03372 at 3550.139 kb on + strand, within MPMX20_03372 at 3550.147 kb on - strand, within MPMX20_03372 at 3550.211 kb on - strand, within MPMX20_03372 at 3550.235 kb on - strand, within MPMX20_03372 at 3550.284 kb on + strand, within MPMX20_03372 at 3550.284 kb on + strand, within MPMX20_03372 at 3550.287 kb on - strand, within MPMX20_03372 at 3550.307 kb on + strand, within MPMX20_03372 at 3550.307 kb on + strand, within MPMX20_03372 at 3550.376 kb on + strand at 3550.481 kb on + strand at 3550.481 kb on + strand at 3550.481 kb on + strand at 3550.489 kb on - strand at 3550.489 kb on - strand at 3550.489 kb on - strand at 3550.489 kb on - strand at 3550.499 kb on - strand at 3550.654 kb on - strand, within MPMX20_03373 at 3550.752 kb on + strand, within MPMX20_03373 at 3550.752 kb on + strand, within MPMX20_03373 at 3550.760 kb on - strand, within MPMX20_03373 at 3550.760 kb on - strand, within MPMX20_03373 at 3550.760 kb on - strand, within MPMX20_03373 at 3550.767 kb on + strand, within MPMX20_03373 at 3550.914 kb on - strand, within MPMX20_03373 at 3551.039 kb on - strand, within MPMX20_03373 at 3551.039 kb on - strand, within MPMX20_03373 at 3551.086 kb on - strand, within MPMX20_03373 at 3551.200 kb on - strand, within MPMX20_03373 at 3551.201 kb on - strand, within MPMX20_03373 at 3551.269 kb on + strand, within MPMX20_03373 at 3551.287 kb on - strand, within MPMX20_03373 at 3551.322 kb on + strand, within MPMX20_03373 at 3551.322 kb on + strand, within MPMX20_03373 at 3551.323 kb on + strand, within MPMX20_03373 at 3551.330 kb on - strand, within MPMX20_03373 at 3551.331 kb on - strand, within MPMX20_03373 at 3551.332 kb on + strand, within MPMX20_03373 at 3551.340 kb on - strand, within MPMX20_03373 at 3551.391 kb on + strand at 3551.399 kb on - strand at 3551.399 kb on - strand at 3551.408 kb on + strand at 3551.408 kb on + strand at 3551.416 kb on - strand at 3551.459 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,548,571 + MPMX20_03371 0.41 -0.7 3,548,575 + MPMX20_03371 0.41 +0.8 3,548,585 + MPMX20_03371 0.42 -2.4 3,548,595 + MPMX20_03371 0.43 +0.6 3,548,595 + MPMX20_03371 0.43 +1.3 3,548,603 + MPMX20_03371 0.43 +0.2 3,548,603 - MPMX20_03371 0.43 -0.4 3,548,603 - MPMX20_03371 0.43 -1.9 3,548,618 + MPMX20_03371 0.44 -1.2 3,548,626 - MPMX20_03371 0.45 -0.1 3,548,639 + MPMX20_03371 0.45 +0.1 3,548,639 + MPMX20_03371 0.45 +0.0 3,548,639 + MPMX20_03371 0.45 +0.3 3,548,639 + MPMX20_03371 0.45 +0.4 3,548,647 - MPMX20_03371 0.46 +1.3 3,548,647 - MPMX20_03371 0.46 -0.1 3,548,647 - MPMX20_03371 0.46 -1.0 3,548,647 - MPMX20_03371 0.46 -0.2 3,548,647 - MPMX20_03371 0.46 -1.8 3,548,647 - MPMX20_03371 0.46 -1.3 3,548,647 - MPMX20_03371 0.46 -1.1 3,548,647 - MPMX20_03371 0.46 -0.3 3,548,948 + MPMX20_03371 0.65 -0.2 3,548,948 - MPMX20_03371 0.65 -0.6 3,548,974 + MPMX20_03371 0.67 -0.7 3,548,993 + MPMX20_03371 0.68 -0.5 3,549,030 - MPMX20_03371 0.71 -1.4 3,549,064 + MPMX20_03371 0.73 +0.2 3,549,065 - MPMX20_03371 0.73 -0.4 3,549,087 - MPMX20_03371 0.74 +0.5 3,549,105 + MPMX20_03371 0.76 +0.8 3,549,159 - MPMX20_03371 0.79 -1.5 3,549,161 + MPMX20_03371 0.79 -2.3 3,549,161 + MPMX20_03371 0.79 -0.0 3,549,169 - MPMX20_03371 0.80 -1.4 3,549,169 - MPMX20_03371 0.80 -0.2 3,549,174 - MPMX20_03371 0.80 -0.3 3,549,334 + +0.8 3,549,334 + -0.8 3,549,342 - -0.1 3,549,379 + -1.1 3,549,407 + -0.8 3,549,407 + -1.5 3,549,407 + +0.2 3,549,407 + -0.6 3,549,425 - +0.5 3,549,425 - -1.0 3,549,471 + -0.1 3,549,471 + +0.1 3,549,479 - +1.0 3,549,479 - -1.4 3,549,479 - +1.1 3,549,480 - -0.0 3,549,487 - -0.3 3,549,495 + -1.4 3,549,495 + -0.3 3,549,503 - +0.6 3,549,507 + -0.4 3,549,508 - -1.3 3,549,598 + -0.3 3,549,644 - MPMX20_03372 0.12 -1.8 3,549,784 + MPMX20_03372 0.27 +1.3 3,549,839 + MPMX20_03372 0.32 +0.1 3,549,840 + MPMX20_03372 0.33 -0.8 3,549,847 - MPMX20_03372 0.33 -0.1 3,549,896 + MPMX20_03372 0.39 -1.6 3,549,934 + MPMX20_03372 0.43 -0.3 3,549,956 + MPMX20_03372 0.45 -0.8 3,549,956 + MPMX20_03372 0.45 -0.5 3,549,984 - MPMX20_03372 0.48 -1.3 3,550,084 + MPMX20_03372 0.59 +0.7 3,550,139 + MPMX20_03372 0.65 -1.3 3,550,147 - MPMX20_03372 0.66 -0.6 3,550,211 - MPMX20_03372 0.72 -0.2 3,550,235 - MPMX20_03372 0.75 +1.1 3,550,284 + MPMX20_03372 0.80 -0.2 3,550,284 + MPMX20_03372 0.80 -0.6 3,550,287 - MPMX20_03372 0.81 +0.9 3,550,307 + MPMX20_03372 0.83 -0.4 3,550,307 + MPMX20_03372 0.83 -2.0 3,550,376 + +2.9 3,550,481 + -0.5 3,550,481 + -1.5 3,550,481 + -1.6 3,550,489 - -1.1 3,550,489 - +1.3 3,550,489 - +1.3 3,550,489 - -0.6 3,550,499 - -0.4 3,550,654 - MPMX20_03373 0.16 -0.9 3,550,752 + MPMX20_03373 0.26 -1.1 3,550,752 + MPMX20_03373 0.26 -0.6 3,550,760 - MPMX20_03373 0.27 -1.1 3,550,760 - MPMX20_03373 0.27 +0.6 3,550,760 - MPMX20_03373 0.27 -0.5 3,550,767 + MPMX20_03373 0.27 -0.1 3,550,914 - MPMX20_03373 0.42 -2.2 3,551,039 - MPMX20_03373 0.55 +1.3 3,551,039 - MPMX20_03373 0.55 -1.6 3,551,086 - MPMX20_03373 0.60 +0.9 3,551,200 - MPMX20_03373 0.71 -1.3 3,551,201 - MPMX20_03373 0.71 -1.7 3,551,269 + MPMX20_03373 0.78 +1.9 3,551,287 - MPMX20_03373 0.80 +0.0 3,551,322 + MPMX20_03373 0.83 -1.3 3,551,322 + MPMX20_03373 0.83 -0.9 3,551,323 + MPMX20_03373 0.84 -2.0 3,551,330 - MPMX20_03373 0.84 -0.7 3,551,331 - MPMX20_03373 0.84 +0.2 3,551,332 + MPMX20_03373 0.84 +0.3 3,551,340 - MPMX20_03373 0.85 -0.9 3,551,391 + -2.1 3,551,399 - -1.4 3,551,399 - +0.8 3,551,408 + +0.1 3,551,408 + +0.6 3,551,416 - -0.6 3,551,459 + -0.4
Or see this region's nucleotide sequence