Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03042

Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03040 and MPMX20_03041 overlap by 1 nucleotidesMPMX20_03041 and MPMX20_03042 are separated by 22 nucleotidesMPMX20_03042 and MPMX20_03043 are separated by 2 nucleotidesMPMX20_03043 and MPMX20_03044 are separated by 6 nucleotides MPMX20_03040: MPMX20_03040 - Serine acetyltransferase, at 3,177,997 to 3,178,488 _03040 MPMX20_03041: MPMX20_03041 - hypothetical protein, at 3,178,488 to 3,179,330 _03041 MPMX20_03042: MPMX20_03042 - Tyrosine-protein kinase wzc, at 3,179,353 to 3,181,515 _03042 MPMX20_03043: MPMX20_03043 - Low molecular weight protein-tyrosine-phosphatase Wzb, at 3,181,518 to 3,181,961 _03043 MPMX20_03044: MPMX20_03044 - hypothetical protein, at 3,181,968 to 3,183,107 _03044 Position (kb) 3179 3180 3181 3182Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 3178.372 kb on - strand, within MPMX20_03040at 3178.426 kb on + strand, within MPMX20_03040at 3178.446 kb on + strandat 3178.452 kb on + strandat 3178.452 kb on + strandat 3178.452 kb on + strandat 3178.452 kb on + strandat 3178.462 kb on - strandat 3178.510 kb on + strandat 3178.550 kb on + strandat 3178.578 kb on + strand, within MPMX20_03041at 3178.755 kb on + strand, within MPMX20_03041at 3178.788 kb on - strand, within MPMX20_03041at 3178.803 kb on - strand, within MPMX20_03041at 3178.803 kb on - strand, within MPMX20_03041at 3178.807 kb on + strand, within MPMX20_03041at 3178.823 kb on + strand, within MPMX20_03041at 3178.831 kb on - strand, within MPMX20_03041at 3178.843 kb on + strand, within MPMX20_03041at 3178.856 kb on - strand, within MPMX20_03041at 3178.999 kb on - strand, within MPMX20_03041at 3179.058 kb on + strand, within MPMX20_03041at 3179.059 kb on + strand, within MPMX20_03041at 3179.071 kb on + strand, within MPMX20_03041at 3179.071 kb on + strand, within MPMX20_03041at 3179.071 kb on + strand, within MPMX20_03041at 3179.079 kb on - strand, within MPMX20_03041at 3179.079 kb on - strand, within MPMX20_03041at 3179.094 kb on + strand, within MPMX20_03041at 3179.102 kb on - strand, within MPMX20_03041at 3179.102 kb on - strand, within MPMX20_03041at 3179.132 kb on - strand, within MPMX20_03041at 3179.200 kb on - strand, within MPMX20_03041at 3179.202 kb on + strand, within MPMX20_03041at 3179.202 kb on + strand, within MPMX20_03041at 3179.204 kb on + strand, within MPMX20_03041at 3179.230 kb on + strand, within MPMX20_03041at 3179.316 kb on + strandat 3179.326 kb on + strandat 3179.326 kb on + strandat 3179.326 kb on + strandat 3179.334 kb on - strandat 3179.334 kb on - strandat 3179.334 kb on - strandat 3179.334 kb on - strandat 3179.348 kb on + strandat 3179.360 kb on + strandat 3179.360 kb on - strandat 3179.433 kb on + strandat 3179.481 kb on - strandat 3179.490 kb on - strandat 3179.626 kb on + strand, within MPMX20_03042at 3179.626 kb on + strand, within MPMX20_03042at 3179.663 kb on + strand, within MPMX20_03042at 3179.688 kb on - strand, within MPMX20_03042at 3179.693 kb on - strand, within MPMX20_03042at 3179.744 kb on - strand, within MPMX20_03042at 3179.747 kb on + strand, within MPMX20_03042at 3179.789 kb on + strand, within MPMX20_03042at 3179.797 kb on - strand, within MPMX20_03042at 3179.806 kb on + strand, within MPMX20_03042at 3179.806 kb on + strand, within MPMX20_03042at 3179.807 kb on + strand, within MPMX20_03042at 3179.807 kb on + strand, within MPMX20_03042at 3179.807 kb on + strand, within MPMX20_03042at 3179.813 kb on + strand, within MPMX20_03042at 3179.815 kb on - strand, within MPMX20_03042at 3179.823 kb on + strand, within MPMX20_03042at 3179.823 kb on + strand, within MPMX20_03042at 3179.831 kb on - strand, within MPMX20_03042at 3179.875 kb on - strand, within MPMX20_03042at 3179.885 kb on - strand, within MPMX20_03042at 3179.887 kb on + strand, within MPMX20_03042at 3179.915 kb on + strand, within MPMX20_03042at 3179.934 kb on - strand, within MPMX20_03042at 3180.006 kb on - strand, within MPMX20_03042at 3180.113 kb on + strand, within MPMX20_03042at 3180.128 kb on - strand, within MPMX20_03042at 3180.164 kb on + strand, within MPMX20_03042at 3180.224 kb on - strand, within MPMX20_03042at 3180.224 kb on - strand, within MPMX20_03042at 3180.234 kb on - strand, within MPMX20_03042at 3180.243 kb on - strand, within MPMX20_03042at 3180.260 kb on + strand, within MPMX20_03042at 3180.261 kb on + strand, within MPMX20_03042at 3180.282 kb on + strand, within MPMX20_03042at 3180.282 kb on + strand, within MPMX20_03042at 3180.299 kb on + strand, within MPMX20_03042at 3180.308 kb on + strand, within MPMX20_03042at 3180.308 kb on + strand, within MPMX20_03042at 3180.308 kb on + strand, within MPMX20_03042at 3180.364 kb on - strand, within MPMX20_03042at 3180.413 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.486 kb on + strand, within MPMX20_03042at 3180.490 kb on + strand, within MPMX20_03042at 3180.494 kb on - strand, within MPMX20_03042at 3180.494 kb on - strand, within MPMX20_03042at 3180.512 kb on + strand, within MPMX20_03042at 3180.512 kb on + strand, within MPMX20_03042at 3180.512 kb on + strand, within MPMX20_03042at 3180.512 kb on + strand, within MPMX20_03042at 3180.537 kb on + strand, within MPMX20_03042at 3180.564 kb on + strand, within MPMX20_03042at 3180.572 kb on - strand, within MPMX20_03042at 3180.572 kb on - strand, within MPMX20_03042at 3180.664 kb on + strand, within MPMX20_03042at 3180.664 kb on + strand, within MPMX20_03042at 3180.673 kb on + strand, within MPMX20_03042at 3180.744 kb on + strand, within MPMX20_03042at 3180.755 kb on + strand, within MPMX20_03042at 3180.758 kb on - strand, within MPMX20_03042at 3180.798 kb on - strand, within MPMX20_03042at 3180.833 kb on + strand, within MPMX20_03042at 3180.868 kb on + strand, within MPMX20_03042at 3180.868 kb on + strand, within MPMX20_03042at 3180.896 kb on - strand, within MPMX20_03042at 3180.937 kb on - strand, within MPMX20_03042at 3180.938 kb on - strand, within MPMX20_03042at 3180.987 kb on - strand, within MPMX20_03042at 3181.056 kb on + strand, within MPMX20_03042at 3181.056 kb on + strand, within MPMX20_03042at 3181.056 kb on + strand, within MPMX20_03042at 3181.063 kb on + strand, within MPMX20_03042at 3181.064 kb on - strand, within MPMX20_03042at 3181.115 kb on + strand, within MPMX20_03042at 3181.185 kb on + strand, within MPMX20_03042at 3181.191 kb on + strand, within MPMX20_03042at 3181.208 kb on + strand, within MPMX20_03042at 3181.216 kb on - strand, within MPMX20_03042at 3181.216 kb on - strand, within MPMX20_03042at 3181.291 kb on + strand, within MPMX20_03042at 3181.299 kb on - strandat 3181.346 kb on - strandat 3181.356 kb on - strandat 3181.356 kb on - strandat 3181.356 kb on - strandat 3181.439 kb on + strandat 3181.521 kb on + strandat 3181.573 kb on - strand, within MPMX20_03043at 3181.575 kb on + strand, within MPMX20_03043at 3181.583 kb on - strand, within MPMX20_03043at 3181.583 kb on - strand, within MPMX20_03043at 3181.694 kb on + strand, within MPMX20_03043at 3181.694 kb on + strand, within MPMX20_03043at 3181.701 kb on + strand, within MPMX20_03043at 3181.853 kb on + strand, within MPMX20_03043at 3181.853 kb on + strand, within MPMX20_03043at 3181.856 kb on - strand, within MPMX20_03043at 3181.861 kb on - strand, within MPMX20_03043at 3181.879 kb on + strand, within MPMX20_03043at 3181.882 kb on - strand, within MPMX20_03043at 3181.907 kb on - strand, within MPMX20_03043at 3182.070 kb on + strandat 3182.153 kb on + strand, within MPMX20_03044at 3182.184 kb on + strand, within MPMX20_03044at 3182.184 kb on + strand, within MPMX20_03044at 3182.192 kb on - strand, within MPMX20_03044at 3182.192 kb on - strand, within MPMX20_03044at 3182.192 kb on - strand, within MPMX20_03044at 3182.225 kb on + strand, within MPMX20_03044at 3182.225 kb on + strand, within MPMX20_03044at 3182.233 kb on - strand, within MPMX20_03044at 3182.233 kb on - strand, within MPMX20_03044at 3182.240 kb on + strand, within MPMX20_03044at 3182.240 kb on + strand, within MPMX20_03044at 3182.240 kb on + strand, within MPMX20_03044at 3182.240 kb on + strand, within MPMX20_03044at 3182.248 kb on - strand, within MPMX20_03044at 3182.259 kb on + strand, within MPMX20_03044at 3182.259 kb on + strand, within MPMX20_03044at 3182.259 kb on + strand, within MPMX20_03044at 3182.262 kb on - strand, within MPMX20_03044at 3182.276 kb on + strand, within MPMX20_03044at 3182.279 kb on - strand, within MPMX20_03044at 3182.279 kb on - strand, within MPMX20_03044at 3182.279 kb on - strand, within MPMX20_03044at 3182.279 kb on - strand, within MPMX20_03044at 3182.339 kb on + strand, within MPMX20_03044at 3182.385 kb on + strand, within MPMX20_03044at 3182.394 kb on + strand, within MPMX20_03044at 3182.405 kb on + strand, within MPMX20_03044at 3182.473 kb on - strand, within MPMX20_03044at 3182.473 kb on - strand, within MPMX20_03044at 3182.478 kb on - strand, within MPMX20_03044

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,178,372 - MPMX20_03040 0.76 -1.3
3,178,426 + MPMX20_03040 0.87 +0.4
3,178,446 + -0.1
3,178,452 + -1.1
3,178,452 + -0.2
3,178,452 + +1.9
3,178,452 + +1.2
3,178,462 - +1.9
3,178,510 + +0.1
3,178,550 + -1.8
3,178,578 + MPMX20_03041 0.11 -0.6
3,178,755 + MPMX20_03041 0.32 +4.5
3,178,788 - MPMX20_03041 0.36 -0.7
3,178,803 - MPMX20_03041 0.37 -1.8
3,178,803 - MPMX20_03041 0.37 +1.1
3,178,807 + MPMX20_03041 0.38 -0.2
3,178,823 + MPMX20_03041 0.40 +0.9
3,178,831 - MPMX20_03041 0.41 +3.9
3,178,843 + MPMX20_03041 0.42 -1.1
3,178,856 - MPMX20_03041 0.44 -2.9
3,178,999 - MPMX20_03041 0.61 -2.2
3,179,058 + MPMX20_03041 0.68 -0.3
3,179,059 + MPMX20_03041 0.68 +1.7
3,179,071 + MPMX20_03041 0.69 +0.6
3,179,071 + MPMX20_03041 0.69 -0.8
3,179,071 + MPMX20_03041 0.69 -0.9
3,179,079 - MPMX20_03041 0.70 +1.1
3,179,079 - MPMX20_03041 0.70 +0.1
3,179,094 + MPMX20_03041 0.72 +1.9
3,179,102 - MPMX20_03041 0.73 -0.6
3,179,102 - MPMX20_03041 0.73 +0.4
3,179,132 - MPMX20_03041 0.76 +0.1
3,179,200 - MPMX20_03041 0.84 +0.4
3,179,202 + MPMX20_03041 0.85 +1.6
3,179,202 + MPMX20_03041 0.85 +1.9
3,179,204 + MPMX20_03041 0.85 -0.5
3,179,230 + MPMX20_03041 0.88 +1.4
3,179,316 + +2.9
3,179,326 + -1.7
3,179,326 + -0.8
3,179,326 + -1.6
3,179,334 - +3.4
3,179,334 - +0.0
3,179,334 - +0.6
3,179,334 - +0.4
3,179,348 + +0.2
3,179,360 + -1.2
3,179,360 - -1.1
3,179,433 + -1.5
3,179,481 - +0.1
3,179,490 - +0.6
3,179,626 + MPMX20_03042 0.13 +0.0
3,179,626 + MPMX20_03042 0.13 +1.9
3,179,663 + MPMX20_03042 0.14 -0.9
3,179,688 - MPMX20_03042 0.15 -1.3
3,179,693 - MPMX20_03042 0.16 +1.0
3,179,744 - MPMX20_03042 0.18 +0.1
3,179,747 + MPMX20_03042 0.18 -0.2
3,179,789 + MPMX20_03042 0.20 +1.2
3,179,797 - MPMX20_03042 0.21 -1.0
3,179,806 + MPMX20_03042 0.21 +5.5
3,179,806 + MPMX20_03042 0.21 -0.1
3,179,807 + MPMX20_03042 0.21 -0.9
3,179,807 + MPMX20_03042 0.21 +1.4
3,179,807 + MPMX20_03042 0.21 -1.2
3,179,813 + MPMX20_03042 0.21 +3.5
3,179,815 - MPMX20_03042 0.21 +0.4
3,179,823 + MPMX20_03042 0.22 +1.6
3,179,823 + MPMX20_03042 0.22 -0.6
3,179,831 - MPMX20_03042 0.22 +2.9
3,179,875 - MPMX20_03042 0.24 +2.9
3,179,885 - MPMX20_03042 0.25 +0.0
3,179,887 + MPMX20_03042 0.25 +0.6
3,179,915 + MPMX20_03042 0.26 -0.6
3,179,934 - MPMX20_03042 0.27 +0.1
3,180,006 - MPMX20_03042 0.30 +2.2
3,180,113 + MPMX20_03042 0.35 -1.4
3,180,128 - MPMX20_03042 0.36 -1.0
3,180,164 + MPMX20_03042 0.37 +0.1
3,180,224 - MPMX20_03042 0.40 -0.6
3,180,224 - MPMX20_03042 0.40 +0.6
3,180,234 - MPMX20_03042 0.41 -0.9
3,180,243 - MPMX20_03042 0.41 -1.1
3,180,260 + MPMX20_03042 0.42 -0.8
3,180,261 + MPMX20_03042 0.42 +1.6
3,180,282 + MPMX20_03042 0.43 -0.6
3,180,282 + MPMX20_03042 0.43 +0.4
3,180,299 + MPMX20_03042 0.44 +1.7
3,180,308 + MPMX20_03042 0.44 +0.1
3,180,308 + MPMX20_03042 0.44 +1.7
3,180,308 + MPMX20_03042 0.44 -0.1
3,180,364 - MPMX20_03042 0.47 +0.4
3,180,413 + MPMX20_03042 0.49 +0.1
3,180,486 + MPMX20_03042 0.52 +1.6
3,180,486 + MPMX20_03042 0.52 +2.9
3,180,486 + MPMX20_03042 0.52 -0.1
3,180,486 + MPMX20_03042 0.52 -1.0
3,180,486 + MPMX20_03042 0.52 +0.4
3,180,486 + MPMX20_03042 0.52 +0.4
3,180,486 + MPMX20_03042 0.52 +0.9
3,180,486 + MPMX20_03042 0.52 -1.0
3,180,486 + MPMX20_03042 0.52 +0.6
3,180,486 + MPMX20_03042 0.52 +1.1
3,180,490 + MPMX20_03042 0.53 +1.9
3,180,494 - MPMX20_03042 0.53 -0.2
3,180,494 - MPMX20_03042 0.53 +0.6
3,180,512 + MPMX20_03042 0.54 +1.6
3,180,512 + MPMX20_03042 0.54 +1.9
3,180,512 + MPMX20_03042 0.54 +1.4
3,180,512 + MPMX20_03042 0.54 +0.9
3,180,537 + MPMX20_03042 0.55 -0.6
3,180,564 + MPMX20_03042 0.56 +1.7
3,180,572 - MPMX20_03042 0.56 -1.3
3,180,572 - MPMX20_03042 0.56 -1.3
3,180,664 + MPMX20_03042 0.61 +0.9
3,180,664 + MPMX20_03042 0.61 -3.0
3,180,673 + MPMX20_03042 0.61 -0.4
3,180,744 + MPMX20_03042 0.64 +0.4
3,180,755 + MPMX20_03042 0.65 -0.5
3,180,758 - MPMX20_03042 0.65 +0.5
3,180,798 - MPMX20_03042 0.67 +0.9
3,180,833 + MPMX20_03042 0.68 -0.4
3,180,868 + MPMX20_03042 0.70 +0.1
3,180,868 + MPMX20_03042 0.70 -1.2
3,180,896 - MPMX20_03042 0.71 -0.4
3,180,937 - MPMX20_03042 0.73 +0.9
3,180,938 - MPMX20_03042 0.73 +0.6
3,180,987 - MPMX20_03042 0.76 +0.4
3,181,056 + MPMX20_03042 0.79 -2.7
3,181,056 + MPMX20_03042 0.79 +0.0
3,181,056 + MPMX20_03042 0.79 +0.1
3,181,063 + MPMX20_03042 0.79 +2.2
3,181,064 - MPMX20_03042 0.79 -1.0
3,181,115 + MPMX20_03042 0.81 +2.5
3,181,185 + MPMX20_03042 0.85 +1.2
3,181,191 + MPMX20_03042 0.85 +1.4
3,181,208 + MPMX20_03042 0.86 +0.1
3,181,216 - MPMX20_03042 0.86 +1.6
3,181,216 - MPMX20_03042 0.86 +2.0
3,181,291 + MPMX20_03042 0.90 +0.4
3,181,299 - -1.4
3,181,346 - +0.1
3,181,356 - -1.2
3,181,356 - -0.1
3,181,356 - -1.7
3,181,439 + +0.2
3,181,521 + +0.4
3,181,573 - MPMX20_03043 0.12 -0.8
3,181,575 + MPMX20_03043 0.13 -0.6
3,181,583 - MPMX20_03043 0.15 +1.4
3,181,583 - MPMX20_03043 0.15 -0.7
3,181,694 + MPMX20_03043 0.40 +2.4
3,181,694 + MPMX20_03043 0.40 +0.8
3,181,701 + MPMX20_03043 0.41 -1.7
3,181,853 + MPMX20_03043 0.75 -1.3
3,181,853 + MPMX20_03043 0.75 -0.8
3,181,856 - MPMX20_03043 0.76 +1.9
3,181,861 - MPMX20_03043 0.77 +0.1
3,181,879 + MPMX20_03043 0.81 -0.4
3,181,882 - MPMX20_03043 0.82 +0.1
3,181,907 - MPMX20_03043 0.88 +0.4
3,182,070 + -1.2
3,182,153 + MPMX20_03044 0.16 +0.5
3,182,184 + MPMX20_03044 0.19 -0.1
3,182,184 + MPMX20_03044 0.19 -1.0
3,182,192 - MPMX20_03044 0.20 -0.7
3,182,192 - MPMX20_03044 0.20 -0.9
3,182,192 - MPMX20_03044 0.20 -0.6
3,182,225 + MPMX20_03044 0.23 +0.7
3,182,225 + MPMX20_03044 0.23 -0.2
3,182,233 - MPMX20_03044 0.23 -1.6
3,182,233 - MPMX20_03044 0.23 +0.2
3,182,240 + MPMX20_03044 0.24 -1.4
3,182,240 + MPMX20_03044 0.24 -0.5
3,182,240 + MPMX20_03044 0.24 +0.2
3,182,240 + MPMX20_03044 0.24 +0.2
3,182,248 - MPMX20_03044 0.25 +1.0
3,182,259 + MPMX20_03044 0.26 +2.0
3,182,259 + MPMX20_03044 0.26 +3.7
3,182,259 + MPMX20_03044 0.26 -0.4
3,182,262 - MPMX20_03044 0.26 +1.0
3,182,276 + MPMX20_03044 0.27 -1.4
3,182,279 - MPMX20_03044 0.27 -0.2
3,182,279 - MPMX20_03044 0.27 +1.4
3,182,279 - MPMX20_03044 0.27 -1.1
3,182,279 - MPMX20_03044 0.27 +0.2
3,182,339 + MPMX20_03044 0.33 -1.4
3,182,385 + MPMX20_03044 0.37 -0.8
3,182,394 + MPMX20_03044 0.37 +0.6
3,182,405 + MPMX20_03044 0.38 +0.2
3,182,473 - MPMX20_03044 0.44 -0.0
3,182,473 - MPMX20_03044 0.44 -1.3
3,182,478 - MPMX20_03044 0.45 +1.4

Or see this region's nucleotide sequence