Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02712 and MPMX20_02713 are separated by 37 nucleotides MPMX20_02713 and MPMX20_02714 are separated by 66 nucleotides MPMX20_02714 and MPMX20_02715 are separated by 131 nucleotides MPMX20_02715 and MPMX20_02716 are separated by 6 nucleotides MPMX20_02716 and MPMX20_02717 are separated by 52 nucleotides
MPMX20_02712: MPMX20_02712 - Outer membrane protein Slp, at 2,866,009 to 2,866,590
_02712
MPMX20_02713: MPMX20_02713 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,866,628 to 2,867,323
_02713
MPMX20_02714: MPMX20_02714 - putative ATP-dependent DNA helicase YoaA, at 2,867,390 to 2,869,300
_02714
MPMX20_02715: MPMX20_02715 - 2-iminobutanoate/2-iminopropanoate deaminase, at 2,869,432 to 2,869,776
_02715
MPMX20_02716: MPMX20_02716 - hypothetical protein, at 2,869,783 to 2,869,965
_02716
MPMX20_02717: MPMX20_02717 - Aminodeoxychorismate synthase component 1, at 2,870,018 to 2,871,373
_02717
Position (kb)
2867
2868
2869
2870 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2866.390 kb on + strand, within MPMX20_02712 at 2866.443 kb on + strand, within MPMX20_02712 at 2866.451 kb on - strand, within MPMX20_02712 at 2866.482 kb on + strand, within MPMX20_02712 at 2866.533 kb on + strand at 2866.541 kb on - strand at 2866.541 kb on - strand at 2866.543 kb on - strand at 2866.564 kb on - strand at 2866.571 kb on + strand at 2866.571 kb on + strand at 2866.571 kb on + strand at 2866.579 kb on - strand at 2866.623 kb on - strand at 2867.489 kb on - strand at 2867.511 kb on + strand at 2867.546 kb on + strand at 2867.563 kb on - strand at 2867.563 kb on - strand at 2867.573 kb on + strand at 2867.574 kb on - strand at 2867.717 kb on - strand, within MPMX20_02714 at 2867.730 kb on - strand, within MPMX20_02714 at 2867.844 kb on + strand, within MPMX20_02714 at 2867.886 kb on + strand, within MPMX20_02714 at 2867.893 kb on + strand, within MPMX20_02714 at 2867.894 kb on - strand, within MPMX20_02714 at 2867.901 kb on - strand, within MPMX20_02714 at 2867.901 kb on - strand, within MPMX20_02714 at 2867.901 kb on - strand, within MPMX20_02714 at 2868.045 kb on + strand, within MPMX20_02714 at 2868.080 kb on + strand, within MPMX20_02714 at 2868.183 kb on + strand, within MPMX20_02714 at 2868.220 kb on + strand, within MPMX20_02714 at 2868.235 kb on - strand, within MPMX20_02714 at 2868.324 kb on + strand, within MPMX20_02714 at 2868.544 kb on - strand, within MPMX20_02714 at 2868.554 kb on + strand, within MPMX20_02714 at 2868.613 kb on - strand, within MPMX20_02714 at 2868.656 kb on - strand, within MPMX20_02714 at 2868.786 kb on - strand, within MPMX20_02714 at 2868.868 kb on - strand, within MPMX20_02714 at 2868.876 kb on + strand, within MPMX20_02714 at 2868.880 kb on + strand, within MPMX20_02714 at 2868.899 kb on - strand, within MPMX20_02714 at 2868.970 kb on + strand, within MPMX20_02714 at 2868.970 kb on + strand, within MPMX20_02714 at 2868.970 kb on + strand, within MPMX20_02714 at 2869.059 kb on - strand, within MPMX20_02714 at 2869.081 kb on + strand, within MPMX20_02714 at 2869.089 kb on - strand, within MPMX20_02714 at 2869.089 kb on - strand, within MPMX20_02714 at 2869.097 kb on + strand, within MPMX20_02714 at 2869.205 kb on + strand at 2869.243 kb on + strand at 2869.336 kb on - strand at 2869.343 kb on - strand at 2869.349 kb on + strand at 2869.349 kb on + strand at 2869.349 kb on + strand at 2869.392 kb on - strand at 2869.392 kb on - strand at 2869.408 kb on + strand at 2869.456 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.466 kb on + strand at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.474 kb on - strand, within MPMX20_02715 at 2869.481 kb on + strand, within MPMX20_02715 at 2869.502 kb on - strand, within MPMX20_02715 at 2869.534 kb on - strand, within MPMX20_02715 at 2869.566 kb on + strand, within MPMX20_02715 at 2869.566 kb on + strand, within MPMX20_02715 at 2869.574 kb on - strand, within MPMX20_02715 at 2869.574 kb on - strand, within MPMX20_02715 at 2869.574 kb on - strand, within MPMX20_02715 at 2869.610 kb on + strand, within MPMX20_02715 at 2869.618 kb on - strand, within MPMX20_02715 at 2869.682 kb on - strand, within MPMX20_02715 at 2869.707 kb on - strand, within MPMX20_02715 at 2869.709 kb on + strand, within MPMX20_02715 at 2869.712 kb on + strand, within MPMX20_02715 at 2869.712 kb on + strand, within MPMX20_02715 at 2869.836 kb on - strand, within MPMX20_02716 at 2869.899 kb on - strand, within MPMX20_02716 at 2869.949 kb on + strand at 2870.006 kb on + strand at 2870.008 kb on + strand at 2870.008 kb on + strand at 2870.008 kb on + strand at 2870.008 kb on + strand at 2870.013 kb on + strand at 2870.013 kb on + strand at 2870.016 kb on - strand at 2870.016 kb on - strand at 2870.016 kb on - strand at 2870.021 kb on - strand at 2870.021 kb on - strand at 2870.021 kb on - strand at 2870.091 kb on - strand at 2870.183 kb on - strand, within MPMX20_02717 at 2870.194 kb on - strand, within MPMX20_02717 at 2870.194 kb on - strand, within MPMX20_02717 at 2870.209 kb on - strand, within MPMX20_02717 at 2870.244 kb on - strand, within MPMX20_02717 at 2870.256 kb on + strand, within MPMX20_02717 at 2870.283 kb on - strand, within MPMX20_02717 at 2870.284 kb on + strand, within MPMX20_02717 at 2870.284 kb on + strand, within MPMX20_02717 at 2870.284 kb on + strand, within MPMX20_02717 at 2870.292 kb on - strand, within MPMX20_02717
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,866,390 + MPMX20_02712 0.65 +0.9 2,866,443 + MPMX20_02712 0.75 -0.2 2,866,451 - MPMX20_02712 0.76 -1.9 2,866,482 + MPMX20_02712 0.81 -0.8 2,866,533 + +1.3 2,866,541 - -0.7 2,866,541 - -0.0 2,866,543 - -0.4 2,866,564 - -1.8 2,866,571 + -0.2 2,866,571 + +1.1 2,866,571 + -0.2 2,866,579 - -1.0 2,866,623 - +0.6 2,867,489 - +0.2 2,867,511 + -1.0 2,867,546 + -1.0 2,867,563 - -0.0 2,867,563 - +0.4 2,867,573 + +2.5 2,867,574 - +0.9 2,867,717 - MPMX20_02714 0.17 -1.6 2,867,730 - MPMX20_02714 0.18 -0.7 2,867,844 + MPMX20_02714 0.24 +0.6 2,867,886 + MPMX20_02714 0.26 -1.3 2,867,893 + MPMX20_02714 0.26 +0.6 2,867,894 - MPMX20_02714 0.26 +1.3 2,867,901 - MPMX20_02714 0.27 -1.3 2,867,901 - MPMX20_02714 0.27 +2.9 2,867,901 - MPMX20_02714 0.27 -0.5 2,868,045 + MPMX20_02714 0.34 -0.1 2,868,080 + MPMX20_02714 0.36 -0.8 2,868,183 + MPMX20_02714 0.41 +0.2 2,868,220 + MPMX20_02714 0.43 +0.3 2,868,235 - MPMX20_02714 0.44 -1.0 2,868,324 + MPMX20_02714 0.49 -0.9 2,868,544 - MPMX20_02714 0.60 +1.3 2,868,554 + MPMX20_02714 0.61 -1.1 2,868,613 - MPMX20_02714 0.64 +0.7 2,868,656 - MPMX20_02714 0.66 -0.6 2,868,786 - MPMX20_02714 0.73 -0.2 2,868,868 - MPMX20_02714 0.77 -0.5 2,868,876 + MPMX20_02714 0.78 -0.2 2,868,880 + MPMX20_02714 0.78 -0.3 2,868,899 - MPMX20_02714 0.79 -1.4 2,868,970 + MPMX20_02714 0.83 -1.4 2,868,970 + MPMX20_02714 0.83 +0.6 2,868,970 + MPMX20_02714 0.83 -0.2 2,869,059 - MPMX20_02714 0.87 +0.6 2,869,081 + MPMX20_02714 0.88 +1.0 2,869,089 - MPMX20_02714 0.89 -0.2 2,869,089 - MPMX20_02714 0.89 -0.8 2,869,097 + MPMX20_02714 0.89 -1.8 2,869,205 + -0.1 2,869,243 + +0.9 2,869,336 - -1.0 2,869,343 - -1.4 2,869,349 + -1.2 2,869,349 + +0.9 2,869,349 + -1.8 2,869,392 - +0.6 2,869,392 - -2.2 2,869,408 + -0.9 2,869,456 + -0.2 2,869,466 + -1.8 2,869,466 + -1.5 2,869,466 + -1.4 2,869,466 + -0.4 2,869,466 + +0.9 2,869,466 + -2.0 2,869,466 + -0.8 2,869,466 + -1.5 2,869,466 + +0.4 2,869,466 + -1.7 2,869,474 - MPMX20_02715 0.12 +1.6 2,869,474 - MPMX20_02715 0.12 -0.3 2,869,474 - MPMX20_02715 0.12 -1.6 2,869,474 - MPMX20_02715 0.12 +5.1 2,869,474 - MPMX20_02715 0.12 +1.0 2,869,474 - MPMX20_02715 0.12 -0.3 2,869,474 - MPMX20_02715 0.12 -1.3 2,869,474 - MPMX20_02715 0.12 +1.3 2,869,481 + MPMX20_02715 0.14 +0.4 2,869,502 - MPMX20_02715 0.20 -1.2 2,869,534 - MPMX20_02715 0.30 -0.4 2,869,566 + MPMX20_02715 0.39 -0.6 2,869,566 + MPMX20_02715 0.39 -1.1 2,869,574 - MPMX20_02715 0.41 -1.6 2,869,574 - MPMX20_02715 0.41 +0.9 2,869,574 - MPMX20_02715 0.41 +5.1 2,869,610 + MPMX20_02715 0.52 -1.7 2,869,618 - MPMX20_02715 0.54 -1.3 2,869,682 - MPMX20_02715 0.72 +0.0 2,869,707 - MPMX20_02715 0.80 -0.7 2,869,709 + MPMX20_02715 0.80 -0.3 2,869,712 + MPMX20_02715 0.81 +0.1 2,869,712 + MPMX20_02715 0.81 -0.7 2,869,836 - MPMX20_02716 0.29 -1.6 2,869,899 - MPMX20_02716 0.63 -0.5 2,869,949 + +0.2 2,870,006 + +1.9 2,870,008 + -0.8 2,870,008 + +0.5 2,870,008 + -0.4 2,870,008 + -1.9 2,870,013 + +0.8 2,870,013 + -0.9 2,870,016 - +0.1 2,870,016 - +1.3 2,870,016 - +2.9 2,870,021 - -1.4 2,870,021 - -0.1 2,870,021 - -1.4 2,870,091 - -1.5 2,870,183 - MPMX20_02717 0.12 +1.1 2,870,194 - MPMX20_02717 0.13 -1.0 2,870,194 - MPMX20_02717 0.13 -0.7 2,870,209 - MPMX20_02717 0.14 -2.0 2,870,244 - MPMX20_02717 0.17 +0.3 2,870,256 + MPMX20_02717 0.18 -1.6 2,870,283 - MPMX20_02717 0.20 -1.4 2,870,284 + MPMX20_02717 0.20 -1.1 2,870,284 + MPMX20_02717 0.20 -1.3 2,870,284 + MPMX20_02717 0.20 +0.1 2,870,292 - MPMX20_02717 0.20 -1.7
Or see this region's nucleotide sequence