Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02714

Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02712 and MPMX20_02713 are separated by 37 nucleotidesMPMX20_02713 and MPMX20_02714 are separated by 66 nucleotidesMPMX20_02714 and MPMX20_02715 are separated by 131 nucleotidesMPMX20_02715 and MPMX20_02716 are separated by 6 nucleotidesMPMX20_02716 and MPMX20_02717 are separated by 52 nucleotides MPMX20_02712: MPMX20_02712 - Outer membrane protein Slp, at 2,866,009 to 2,866,590 _02712 MPMX20_02713: MPMX20_02713 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,866,628 to 2,867,323 _02713 MPMX20_02714: MPMX20_02714 - putative ATP-dependent DNA helicase YoaA, at 2,867,390 to 2,869,300 _02714 MPMX20_02715: MPMX20_02715 - 2-iminobutanoate/2-iminopropanoate deaminase, at 2,869,432 to 2,869,776 _02715 MPMX20_02716: MPMX20_02716 - hypothetical protein, at 2,869,783 to 2,869,965 _02716 MPMX20_02717: MPMX20_02717 - Aminodeoxychorismate synthase component 1, at 2,870,018 to 2,871,373 _02717 Position (kb) 2867 2868 2869 2870Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 2866.390 kb on + strand, within MPMX20_02712at 2866.443 kb on + strand, within MPMX20_02712at 2866.451 kb on - strand, within MPMX20_02712at 2866.482 kb on + strand, within MPMX20_02712at 2866.533 kb on + strandat 2866.541 kb on - strandat 2866.541 kb on - strandat 2866.543 kb on - strandat 2866.564 kb on - strandat 2866.571 kb on + strandat 2866.571 kb on + strandat 2866.571 kb on + strandat 2866.579 kb on - strandat 2866.623 kb on - strandat 2867.489 kb on - strandat 2867.511 kb on + strandat 2867.546 kb on + strandat 2867.563 kb on - strandat 2867.563 kb on - strandat 2867.573 kb on + strandat 2867.574 kb on - strandat 2867.717 kb on - strand, within MPMX20_02714at 2867.730 kb on - strand, within MPMX20_02714at 2867.844 kb on + strand, within MPMX20_02714at 2867.886 kb on + strand, within MPMX20_02714at 2867.893 kb on + strand, within MPMX20_02714at 2867.894 kb on - strand, within MPMX20_02714at 2867.901 kb on - strand, within MPMX20_02714at 2867.901 kb on - strand, within MPMX20_02714at 2867.901 kb on - strand, within MPMX20_02714at 2868.045 kb on + strand, within MPMX20_02714at 2868.080 kb on + strand, within MPMX20_02714at 2868.183 kb on + strand, within MPMX20_02714at 2868.220 kb on + strand, within MPMX20_02714at 2868.235 kb on - strand, within MPMX20_02714at 2868.324 kb on + strand, within MPMX20_02714at 2868.544 kb on - strand, within MPMX20_02714at 2868.554 kb on + strand, within MPMX20_02714at 2868.613 kb on - strand, within MPMX20_02714at 2868.656 kb on - strand, within MPMX20_02714at 2868.786 kb on - strand, within MPMX20_02714at 2868.868 kb on - strand, within MPMX20_02714at 2868.876 kb on + strand, within MPMX20_02714at 2868.880 kb on + strand, within MPMX20_02714at 2868.899 kb on - strand, within MPMX20_02714at 2868.970 kb on + strand, within MPMX20_02714at 2868.970 kb on + strand, within MPMX20_02714at 2868.970 kb on + strand, within MPMX20_02714at 2869.059 kb on - strand, within MPMX20_02714at 2869.081 kb on + strand, within MPMX20_02714at 2869.089 kb on - strand, within MPMX20_02714at 2869.089 kb on - strand, within MPMX20_02714at 2869.097 kb on + strand, within MPMX20_02714at 2869.205 kb on + strandat 2869.243 kb on + strandat 2869.336 kb on - strandat 2869.343 kb on - strandat 2869.349 kb on + strandat 2869.349 kb on + strandat 2869.349 kb on + strandat 2869.392 kb on - strandat 2869.392 kb on - strandat 2869.408 kb on + strandat 2869.456 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.466 kb on + strandat 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.474 kb on - strand, within MPMX20_02715at 2869.481 kb on + strand, within MPMX20_02715at 2869.502 kb on - strand, within MPMX20_02715at 2869.534 kb on - strand, within MPMX20_02715at 2869.566 kb on + strand, within MPMX20_02715at 2869.566 kb on + strand, within MPMX20_02715at 2869.574 kb on - strand, within MPMX20_02715at 2869.574 kb on - strand, within MPMX20_02715at 2869.574 kb on - strand, within MPMX20_02715at 2869.610 kb on + strand, within MPMX20_02715at 2869.618 kb on - strand, within MPMX20_02715at 2869.682 kb on - strand, within MPMX20_02715at 2869.707 kb on - strand, within MPMX20_02715at 2869.709 kb on + strand, within MPMX20_02715at 2869.712 kb on + strand, within MPMX20_02715at 2869.712 kb on + strand, within MPMX20_02715at 2869.836 kb on - strand, within MPMX20_02716at 2869.899 kb on - strand, within MPMX20_02716at 2869.949 kb on + strandat 2870.006 kb on + strandat 2870.008 kb on + strandat 2870.008 kb on + strandat 2870.008 kb on + strandat 2870.008 kb on + strandat 2870.013 kb on + strandat 2870.013 kb on + strandat 2870.016 kb on - strandat 2870.016 kb on - strandat 2870.016 kb on - strandat 2870.021 kb on - strandat 2870.021 kb on - strandat 2870.021 kb on - strandat 2870.091 kb on - strandat 2870.183 kb on - strand, within MPMX20_02717at 2870.194 kb on - strand, within MPMX20_02717at 2870.194 kb on - strand, within MPMX20_02717at 2870.209 kb on - strand, within MPMX20_02717at 2870.244 kb on - strand, within MPMX20_02717at 2870.256 kb on + strand, within MPMX20_02717at 2870.283 kb on - strand, within MPMX20_02717at 2870.284 kb on + strand, within MPMX20_02717at 2870.284 kb on + strand, within MPMX20_02717at 2870.284 kb on + strand, within MPMX20_02717at 2870.292 kb on - strand, within MPMX20_02717

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,866,390 + MPMX20_02712 0.65 +0.9
2,866,443 + MPMX20_02712 0.75 -0.2
2,866,451 - MPMX20_02712 0.76 -1.9
2,866,482 + MPMX20_02712 0.81 -0.8
2,866,533 + +1.3
2,866,541 - -0.7
2,866,541 - -0.0
2,866,543 - -0.4
2,866,564 - -1.8
2,866,571 + -0.2
2,866,571 + +1.1
2,866,571 + -0.2
2,866,579 - -1.0
2,866,623 - +0.6
2,867,489 - +0.2
2,867,511 + -1.0
2,867,546 + -1.0
2,867,563 - -0.0
2,867,563 - +0.4
2,867,573 + +2.5
2,867,574 - +0.9
2,867,717 - MPMX20_02714 0.17 -1.6
2,867,730 - MPMX20_02714 0.18 -0.7
2,867,844 + MPMX20_02714 0.24 +0.6
2,867,886 + MPMX20_02714 0.26 -1.3
2,867,893 + MPMX20_02714 0.26 +0.6
2,867,894 - MPMX20_02714 0.26 +1.3
2,867,901 - MPMX20_02714 0.27 -1.3
2,867,901 - MPMX20_02714 0.27 +2.9
2,867,901 - MPMX20_02714 0.27 -0.5
2,868,045 + MPMX20_02714 0.34 -0.1
2,868,080 + MPMX20_02714 0.36 -0.8
2,868,183 + MPMX20_02714 0.41 +0.2
2,868,220 + MPMX20_02714 0.43 +0.3
2,868,235 - MPMX20_02714 0.44 -1.0
2,868,324 + MPMX20_02714 0.49 -0.9
2,868,544 - MPMX20_02714 0.60 +1.3
2,868,554 + MPMX20_02714 0.61 -1.1
2,868,613 - MPMX20_02714 0.64 +0.7
2,868,656 - MPMX20_02714 0.66 -0.6
2,868,786 - MPMX20_02714 0.73 -0.2
2,868,868 - MPMX20_02714 0.77 -0.5
2,868,876 + MPMX20_02714 0.78 -0.2
2,868,880 + MPMX20_02714 0.78 -0.3
2,868,899 - MPMX20_02714 0.79 -1.4
2,868,970 + MPMX20_02714 0.83 -1.4
2,868,970 + MPMX20_02714 0.83 +0.6
2,868,970 + MPMX20_02714 0.83 -0.2
2,869,059 - MPMX20_02714 0.87 +0.6
2,869,081 + MPMX20_02714 0.88 +1.0
2,869,089 - MPMX20_02714 0.89 -0.2
2,869,089 - MPMX20_02714 0.89 -0.8
2,869,097 + MPMX20_02714 0.89 -1.8
2,869,205 + -0.1
2,869,243 + +0.9
2,869,336 - -1.0
2,869,343 - -1.4
2,869,349 + -1.2
2,869,349 + +0.9
2,869,349 + -1.8
2,869,392 - +0.6
2,869,392 - -2.2
2,869,408 + -0.9
2,869,456 + -0.2
2,869,466 + -1.8
2,869,466 + -1.5
2,869,466 + -1.4
2,869,466 + -0.4
2,869,466 + +0.9
2,869,466 + -2.0
2,869,466 + -0.8
2,869,466 + -1.5
2,869,466 + +0.4
2,869,466 + -1.7
2,869,474 - MPMX20_02715 0.12 +1.6
2,869,474 - MPMX20_02715 0.12 -0.3
2,869,474 - MPMX20_02715 0.12 -1.6
2,869,474 - MPMX20_02715 0.12 +5.1
2,869,474 - MPMX20_02715 0.12 +1.0
2,869,474 - MPMX20_02715 0.12 -0.3
2,869,474 - MPMX20_02715 0.12 -1.3
2,869,474 - MPMX20_02715 0.12 +1.3
2,869,481 + MPMX20_02715 0.14 +0.4
2,869,502 - MPMX20_02715 0.20 -1.2
2,869,534 - MPMX20_02715 0.30 -0.4
2,869,566 + MPMX20_02715 0.39 -0.6
2,869,566 + MPMX20_02715 0.39 -1.1
2,869,574 - MPMX20_02715 0.41 -1.6
2,869,574 - MPMX20_02715 0.41 +0.9
2,869,574 - MPMX20_02715 0.41 +5.1
2,869,610 + MPMX20_02715 0.52 -1.7
2,869,618 - MPMX20_02715 0.54 -1.3
2,869,682 - MPMX20_02715 0.72 +0.0
2,869,707 - MPMX20_02715 0.80 -0.7
2,869,709 + MPMX20_02715 0.80 -0.3
2,869,712 + MPMX20_02715 0.81 +0.1
2,869,712 + MPMX20_02715 0.81 -0.7
2,869,836 - MPMX20_02716 0.29 -1.6
2,869,899 - MPMX20_02716 0.63 -0.5
2,869,949 + +0.2
2,870,006 + +1.9
2,870,008 + -0.8
2,870,008 + +0.5
2,870,008 + -0.4
2,870,008 + -1.9
2,870,013 + +0.8
2,870,013 + -0.9
2,870,016 - +0.1
2,870,016 - +1.3
2,870,016 - +2.9
2,870,021 - -1.4
2,870,021 - -0.1
2,870,021 - -1.4
2,870,091 - -1.5
2,870,183 - MPMX20_02717 0.12 +1.1
2,870,194 - MPMX20_02717 0.13 -1.0
2,870,194 - MPMX20_02717 0.13 -0.7
2,870,209 - MPMX20_02717 0.14 -2.0
2,870,244 - MPMX20_02717 0.17 +0.3
2,870,256 + MPMX20_02717 0.18 -1.6
2,870,283 - MPMX20_02717 0.20 -1.4
2,870,284 + MPMX20_02717 0.20 -1.1
2,870,284 + MPMX20_02717 0.20 -1.3
2,870,284 + MPMX20_02717 0.20 +0.1
2,870,292 - MPMX20_02717 0.20 -1.7

Or see this region's nucleotide sequence