Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02523

Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02521 and MPMX20_02522 are separated by 173 nucleotidesMPMX20_02522 and MPMX20_02523 are separated by 112 nucleotidesMPMX20_02523 and MPMX20_02524 are separated by 86 nucleotidesMPMX20_02524 and MPMX20_02525 are separated by 75 nucleotides MPMX20_02521: MPMX20_02521 - hypothetical protein, at 2,662,414 to 2,663,517 _02521 MPMX20_02522: MPMX20_02522 - hypothetical protein, at 2,663,691 to 2,664,047 _02522 MPMX20_02523: MPMX20_02523 - hypothetical protein, at 2,664,160 to 2,664,654 _02523 MPMX20_02524: MPMX20_02524 - hypothetical protein, at 2,664,741 to 2,665,445 _02524 MPMX20_02525: MPMX20_02525 - HTH-type transcriptional regulator PgrR, at 2,665,521 to 2,666,420 _02525 Position (kb) 2664 2665Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 2663.256 kb on + strand, within MPMX20_02521at 2663.277 kb on + strand, within MPMX20_02521at 2663.277 kb on + strand, within MPMX20_02521at 2663.285 kb on - strand, within MPMX20_02521at 2663.285 kb on - strand, within MPMX20_02521at 2663.285 kb on - strand, within MPMX20_02521at 2663.299 kb on - strand, within MPMX20_02521at 2663.330 kb on + strand, within MPMX20_02521at 2663.338 kb on - strand, within MPMX20_02521at 2663.364 kb on + strand, within MPMX20_02521at 2663.365 kb on + strand, within MPMX20_02521at 2663.373 kb on + strand, within MPMX20_02521at 2663.374 kb on + strand, within MPMX20_02521at 2663.381 kb on - strand, within MPMX20_02521at 2663.402 kb on + strand, within MPMX20_02521at 2663.456 kb on + strandat 2663.511 kb on + strandat 2663.512 kb on + strandat 2663.513 kb on + strandat 2663.520 kb on - strandat 2663.562 kb on - strandat 2663.606 kb on - strandat 2663.620 kb on - strandat 2663.620 kb on - strandat 2663.643 kb on + strandat 2663.643 kb on + strandat 2663.643 kb on + strandat 2663.660 kb on - strandat 2663.689 kb on - strandat 2663.728 kb on - strand, within MPMX20_02522at 2663.735 kb on + strand, within MPMX20_02522at 2663.741 kb on - strand, within MPMX20_02522at 2663.741 kb on - strand, within MPMX20_02522at 2663.741 kb on - strand, within MPMX20_02522at 2663.753 kb on - strand, within MPMX20_02522at 2663.755 kb on + strand, within MPMX20_02522at 2663.758 kb on - strand, within MPMX20_02522at 2663.763 kb on - strand, within MPMX20_02522at 2663.763 kb on - strand, within MPMX20_02522at 2663.772 kb on + strand, within MPMX20_02522at 2663.772 kb on + strand, within MPMX20_02522at 2663.772 kb on + strand, within MPMX20_02522at 2663.779 kb on + strand, within MPMX20_02522at 2663.780 kb on - strand, within MPMX20_02522at 2663.780 kb on - strand, within MPMX20_02522at 2663.780 kb on - strand, within MPMX20_02522at 2663.787 kb on - strand, within MPMX20_02522at 2663.787 kb on - strand, within MPMX20_02522at 2663.787 kb on - strand, within MPMX20_02522at 2663.787 kb on - strand, within MPMX20_02522at 2663.787 kb on - strand, within MPMX20_02522at 2663.787 kb on - strand, within MPMX20_02522at 2663.787 kb on - strand, within MPMX20_02522at 2663.792 kb on + strand, within MPMX20_02522at 2663.843 kb on + strand, within MPMX20_02522at 2663.851 kb on - strand, within MPMX20_02522at 2663.859 kb on + strand, within MPMX20_02522at 2663.859 kb on + strand, within MPMX20_02522at 2663.859 kb on + strand, within MPMX20_02522at 2663.859 kb on + strand, within MPMX20_02522at 2663.861 kb on + strand, within MPMX20_02522at 2663.867 kb on - strand, within MPMX20_02522at 2663.876 kb on + strand, within MPMX20_02522at 2663.882 kb on + strand, within MPMX20_02522at 2663.882 kb on + strand, within MPMX20_02522at 2663.882 kb on + strand, within MPMX20_02522at 2663.882 kb on + strand, within MPMX20_02522at 2663.882 kb on + strand, within MPMX20_02522at 2663.882 kb on + strand, within MPMX20_02522at 2663.882 kb on + strand, within MPMX20_02522at 2663.890 kb on - strand, within MPMX20_02522at 2663.890 kb on - strand, within MPMX20_02522at 2663.890 kb on - strand, within MPMX20_02522at 2663.890 kb on - strand, within MPMX20_02522at 2663.934 kb on + strand, within MPMX20_02522at 2663.934 kb on + strand, within MPMX20_02522at 2663.936 kb on + strand, within MPMX20_02522at 2663.939 kb on + strand, within MPMX20_02522at 2663.941 kb on + strand, within MPMX20_02522at 2663.988 kb on + strand, within MPMX20_02522at 2663.988 kb on + strand, within MPMX20_02522at 2664.004 kb on + strand, within MPMX20_02522at 2664.096 kb on + strandat 2664.096 kb on + strandat 2664.104 kb on - strandat 2664.145 kb on + strandat 2664.145 kb on + strandat 2664.145 kb on + strandat 2664.145 kb on - strandat 2664.148 kb on - strandat 2664.148 kb on - strandat 2664.150 kb on + strandat 2664.153 kb on - strandat 2664.154 kb on + strandat 2664.161 kb on - strandat 2664.162 kb on + strandat 2664.173 kb on + strandat 2664.173 kb on + strandat 2664.176 kb on + strandat 2664.181 kb on - strandat 2664.209 kb on + strandat 2664.212 kb on - strand, within MPMX20_02523at 2664.217 kb on - strand, within MPMX20_02523at 2664.217 kb on - strand, within MPMX20_02523at 2664.217 kb on - strand, within MPMX20_02523at 2664.227 kb on - strand, within MPMX20_02523at 2664.227 kb on - strand, within MPMX20_02523at 2664.246 kb on - strand, within MPMX20_02523at 2664.297 kb on + strand, within MPMX20_02523at 2664.327 kb on + strand, within MPMX20_02523at 2664.332 kb on - strand, within MPMX20_02523at 2664.335 kb on - strand, within MPMX20_02523at 2664.335 kb on - strand, within MPMX20_02523at 2664.364 kb on + strand, within MPMX20_02523at 2664.379 kb on - strand, within MPMX20_02523at 2664.412 kb on - strand, within MPMX20_02523at 2664.442 kb on - strand, within MPMX20_02523at 2664.451 kb on + strand, within MPMX20_02523at 2664.453 kb on - strand, within MPMX20_02523at 2664.461 kb on + strand, within MPMX20_02523at 2664.515 kb on + strand, within MPMX20_02523at 2664.515 kb on + strand, within MPMX20_02523at 2664.515 kb on + strand, within MPMX20_02523at 2664.515 kb on + strand, within MPMX20_02523at 2664.517 kb on + strand, within MPMX20_02523at 2664.523 kb on - strand, within MPMX20_02523at 2664.523 kb on - strand, within MPMX20_02523at 2664.533 kb on + strand, within MPMX20_02523at 2664.540 kb on + strand, within MPMX20_02523at 2664.558 kb on + strand, within MPMX20_02523at 2664.591 kb on - strand, within MPMX20_02523at 2664.640 kb on - strandat 2664.649 kb on + strandat 2664.649 kb on + strandat 2664.649 kb on + strandat 2664.657 kb on - strandat 2664.667 kb on - strandat 2664.672 kb on - strandat 2664.710 kb on + strandat 2664.725 kb on + strandat 2664.766 kb on + strandat 2664.771 kb on + strandat 2664.774 kb on - strandat 2664.774 kb on - strandat 2664.774 kb on - strandat 2664.774 kb on - strandat 2664.774 kb on - strandat 2664.779 kb on - strandat 2664.799 kb on + strandat 2664.807 kb on - strandat 2664.864 kb on - strand, within MPMX20_02524at 2664.892 kb on - strand, within MPMX20_02524at 2664.927 kb on - strand, within MPMX20_02524at 2664.938 kb on - strand, within MPMX20_02524at 2664.938 kb on - strand, within MPMX20_02524at 2664.951 kb on - strand, within MPMX20_02524at 2665.009 kb on + strand, within MPMX20_02524at 2665.206 kb on - strand, within MPMX20_02524at 2665.211 kb on + strand, within MPMX20_02524at 2665.213 kb on - strand, within MPMX20_02524at 2665.216 kb on + strand, within MPMX20_02524at 2665.216 kb on + strand, within MPMX20_02524at 2665.222 kb on + strand, within MPMX20_02524at 2665.224 kb on - strand, within MPMX20_02524at 2665.224 kb on - strand, within MPMX20_02524at 2665.235 kb on + strand, within MPMX20_02524at 2665.255 kb on - strand, within MPMX20_02524at 2665.265 kb on + strand, within MPMX20_02524at 2665.265 kb on + strand, within MPMX20_02524at 2665.273 kb on - strand, within MPMX20_02524at 2665.273 kb on - strand, within MPMX20_02524at 2665.299 kb on + strand, within MPMX20_02524at 2665.323 kb on + strand, within MPMX20_02524at 2665.432 kb on + strandat 2665.493 kb on + strandat 2665.493 kb on + strandat 2665.495 kb on - strandat 2665.501 kb on - strandat 2665.527 kb on - strandat 2665.629 kb on - strand, within MPMX20_02525at 2665.652 kb on + strand, within MPMX20_02525at 2665.652 kb on - strand, within MPMX20_02525

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,663,256 + MPMX20_02521 0.76 +0.6
2,663,277 + MPMX20_02521 0.78 -0.7
2,663,277 + MPMX20_02521 0.78 -1.6
2,663,285 - MPMX20_02521 0.79 -0.6
2,663,285 - MPMX20_02521 0.79 -2.1
2,663,285 - MPMX20_02521 0.79 +1.2
2,663,299 - MPMX20_02521 0.80 +0.2
2,663,330 + MPMX20_02521 0.83 -0.4
2,663,338 - MPMX20_02521 0.84 -0.8
2,663,364 + MPMX20_02521 0.86 +1.5
2,663,365 + MPMX20_02521 0.86 -0.8
2,663,373 + MPMX20_02521 0.87 +1.4
2,663,374 + MPMX20_02521 0.87 -0.2
2,663,381 - MPMX20_02521 0.88 +0.2
2,663,402 + MPMX20_02521 0.89 +0.1
2,663,456 + -1.1
2,663,511 + -1.5
2,663,512 + +0.8
2,663,513 + +1.5
2,663,520 - +1.5
2,663,562 - -1.1
2,663,606 - +0.5
2,663,620 - +0.8
2,663,620 - +0.2
2,663,643 + +0.4
2,663,643 + -0.4
2,663,643 + -0.5
2,663,660 - -1.4
2,663,689 - -0.6
2,663,728 - MPMX20_02522 0.10 +0.8
2,663,735 + MPMX20_02522 0.12 +1.1
2,663,741 - MPMX20_02522 0.14 -1.8
2,663,741 - MPMX20_02522 0.14 -0.1
2,663,741 - MPMX20_02522 0.14 +1.0
2,663,753 - MPMX20_02522 0.17 -1.2
2,663,755 + MPMX20_02522 0.18 -0.3
2,663,758 - MPMX20_02522 0.19 -1.1
2,663,763 - MPMX20_02522 0.20 -1.0
2,663,763 - MPMX20_02522 0.20 +0.1
2,663,772 + MPMX20_02522 0.23 -0.4
2,663,772 + MPMX20_02522 0.23 -1.8
2,663,772 + MPMX20_02522 0.23 -2.4
2,663,779 + MPMX20_02522 0.25 +1.2
2,663,780 - MPMX20_02522 0.25 -1.9
2,663,780 - MPMX20_02522 0.25 +1.5
2,663,780 - MPMX20_02522 0.25 -1.5
2,663,787 - MPMX20_02522 0.27 -0.2
2,663,787 - MPMX20_02522 0.27 +0.3
2,663,787 - MPMX20_02522 0.27 +0.0
2,663,787 - MPMX20_02522 0.27 -1.0
2,663,787 - MPMX20_02522 0.27 +2.8
2,663,787 - MPMX20_02522 0.27 +0.2
2,663,787 - MPMX20_02522 0.27 +0.1
2,663,792 + MPMX20_02522 0.28 -1.7
2,663,843 + MPMX20_02522 0.43 -0.3
2,663,851 - MPMX20_02522 0.45 +1.8
2,663,859 + MPMX20_02522 0.47 -1.2
2,663,859 + MPMX20_02522 0.47 +0.5
2,663,859 + MPMX20_02522 0.47 +1.3
2,663,859 + MPMX20_02522 0.47 -1.5
2,663,861 + MPMX20_02522 0.48 -0.9
2,663,867 - MPMX20_02522 0.49 -0.3
2,663,876 + MPMX20_02522 0.52 -1.3
2,663,882 + MPMX20_02522 0.54 -0.7
2,663,882 + MPMX20_02522 0.54 -1.3
2,663,882 + MPMX20_02522 0.54 -0.1
2,663,882 + MPMX20_02522 0.54 +0.9
2,663,882 + MPMX20_02522 0.54 +0.4
2,663,882 + MPMX20_02522 0.54 -0.9
2,663,882 + MPMX20_02522 0.54 +1.2
2,663,890 - MPMX20_02522 0.56 +2.8
2,663,890 - MPMX20_02522 0.56 +0.3
2,663,890 - MPMX20_02522 0.56 +1.2
2,663,890 - MPMX20_02522 0.56 -0.6
2,663,934 + MPMX20_02522 0.68 +0.2
2,663,934 + MPMX20_02522 0.68 -2.2
2,663,936 + MPMX20_02522 0.69 +5.5
2,663,939 + MPMX20_02522 0.69 -2.5
2,663,941 + MPMX20_02522 0.70 -2.7
2,663,988 + MPMX20_02522 0.83 -0.1
2,663,988 + MPMX20_02522 0.83 +1.2
2,664,004 + MPMX20_02522 0.88 +0.0
2,664,096 + -1.5
2,664,096 + -1.3
2,664,104 - +0.4
2,664,145 + +0.8
2,664,145 + -0.9
2,664,145 + -0.5
2,664,145 - +1.2
2,664,148 - -2.1
2,664,148 - -1.2
2,664,150 + -0.9
2,664,153 - -0.9
2,664,154 + -1.5
2,664,161 - -0.4
2,664,162 + +0.3
2,664,173 + -0.5
2,664,173 + -1.3
2,664,176 + +0.8
2,664,181 - -0.2
2,664,209 + -0.9
2,664,212 - MPMX20_02523 0.11 +0.1
2,664,217 - MPMX20_02523 0.12 -1.3
2,664,217 - MPMX20_02523 0.12 -0.5
2,664,217 - MPMX20_02523 0.12 -0.2
2,664,227 - MPMX20_02523 0.14 -2.1
2,664,227 - MPMX20_02523 0.14 -1.8
2,664,246 - MPMX20_02523 0.17 -1.1
2,664,297 + MPMX20_02523 0.28 -0.9
2,664,327 + MPMX20_02523 0.34 -1.1
2,664,332 - MPMX20_02523 0.35 -1.6
2,664,335 - MPMX20_02523 0.35 -1.5
2,664,335 - MPMX20_02523 0.35 +1.2
2,664,364 + MPMX20_02523 0.41 -1.5
2,664,379 - MPMX20_02523 0.44 -1.0
2,664,412 - MPMX20_02523 0.51 -2.3
2,664,442 - MPMX20_02523 0.57 -1.7
2,664,451 + MPMX20_02523 0.59 -0.6
2,664,453 - MPMX20_02523 0.59 +0.0
2,664,461 + MPMX20_02523 0.61 +0.0
2,664,515 + MPMX20_02523 0.72 -1.1
2,664,515 + MPMX20_02523 0.72 -2.4
2,664,515 + MPMX20_02523 0.72 -0.8
2,664,515 + MPMX20_02523 0.72 -0.4
2,664,517 + MPMX20_02523 0.72 -1.4
2,664,523 - MPMX20_02523 0.73 -0.9
2,664,523 - MPMX20_02523 0.73 +2.3
2,664,533 + MPMX20_02523 0.75 +0.1
2,664,540 + MPMX20_02523 0.77 -1.4
2,664,558 + MPMX20_02523 0.80 +1.2
2,664,591 - MPMX20_02523 0.87 -1.1
2,664,640 - -1.1
2,664,649 + -0.8
2,664,649 + -2.0
2,664,649 + -1.6
2,664,657 - -0.4
2,664,667 - -0.9
2,664,672 - -0.8
2,664,710 + +2.2
2,664,725 + +0.5
2,664,766 + -0.5
2,664,771 + -0.6
2,664,774 - -0.6
2,664,774 - -0.4
2,664,774 - +0.5
2,664,774 - +0.1
2,664,774 - -0.4
2,664,779 - -1.8
2,664,799 + -1.6
2,664,807 - -1.4
2,664,864 - MPMX20_02524 0.17 -0.5
2,664,892 - MPMX20_02524 0.21 +1.6
2,664,927 - MPMX20_02524 0.26 -1.5
2,664,938 - MPMX20_02524 0.28 -1.4
2,664,938 - MPMX20_02524 0.28 -0.4
2,664,951 - MPMX20_02524 0.30 -0.5
2,665,009 + MPMX20_02524 0.38 -2.0
2,665,206 - MPMX20_02524 0.66 -0.1
2,665,211 + MPMX20_02524 0.67 +0.4
2,665,213 - MPMX20_02524 0.67 -0.5
2,665,216 + MPMX20_02524 0.67 -2.0
2,665,216 + MPMX20_02524 0.67 -0.3
2,665,222 + MPMX20_02524 0.68 -1.9
2,665,224 - MPMX20_02524 0.69 -0.4
2,665,224 - MPMX20_02524 0.69 -0.5
2,665,235 + MPMX20_02524 0.70 -0.2
2,665,255 - MPMX20_02524 0.73 -1.3
2,665,265 + MPMX20_02524 0.74 -0.5
2,665,265 + MPMX20_02524 0.74 -1.1
2,665,273 - MPMX20_02524 0.75 -0.7
2,665,273 - MPMX20_02524 0.75 +0.4
2,665,299 + MPMX20_02524 0.79 -2.3
2,665,323 + MPMX20_02524 0.83 +0.5
2,665,432 + -0.1
2,665,493 + -0.5
2,665,493 + -0.9
2,665,495 - -0.5
2,665,501 - -1.2
2,665,527 - -1.2
2,665,629 - MPMX20_02525 0.12 +0.1
2,665,652 + MPMX20_02525 0.15 +1.2
2,665,652 - MPMX20_02525 0.15 +0.0

Or see this region's nucleotide sequence