Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02521 and MPMX20_02522 are separated by 173 nucleotides MPMX20_02522 and MPMX20_02523 are separated by 112 nucleotides MPMX20_02523 and MPMX20_02524 are separated by 86 nucleotides MPMX20_02524 and MPMX20_02525 are separated by 75 nucleotides
MPMX20_02521: MPMX20_02521 - hypothetical protein, at 2,662,414 to 2,663,517
_02521
MPMX20_02522: MPMX20_02522 - hypothetical protein, at 2,663,691 to 2,664,047
_02522
MPMX20_02523: MPMX20_02523 - hypothetical protein, at 2,664,160 to 2,664,654
_02523
MPMX20_02524: MPMX20_02524 - hypothetical protein, at 2,664,741 to 2,665,445
_02524
MPMX20_02525: MPMX20_02525 - HTH-type transcriptional regulator PgrR, at 2,665,521 to 2,666,420
_02525
Position (kb)
2664
2665 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2663.256 kb on + strand, within MPMX20_02521 at 2663.277 kb on + strand, within MPMX20_02521 at 2663.277 kb on + strand, within MPMX20_02521 at 2663.285 kb on - strand, within MPMX20_02521 at 2663.285 kb on - strand, within MPMX20_02521 at 2663.285 kb on - strand, within MPMX20_02521 at 2663.299 kb on - strand, within MPMX20_02521 at 2663.330 kb on + strand, within MPMX20_02521 at 2663.338 kb on - strand, within MPMX20_02521 at 2663.364 kb on + strand, within MPMX20_02521 at 2663.365 kb on + strand, within MPMX20_02521 at 2663.373 kb on + strand, within MPMX20_02521 at 2663.374 kb on + strand, within MPMX20_02521 at 2663.381 kb on - strand, within MPMX20_02521 at 2663.402 kb on + strand, within MPMX20_02521 at 2663.456 kb on + strand at 2663.511 kb on + strand at 2663.512 kb on + strand at 2663.513 kb on + strand at 2663.520 kb on - strand at 2663.562 kb on - strand at 2663.606 kb on - strand at 2663.620 kb on - strand at 2663.620 kb on - strand at 2663.643 kb on + strand at 2663.643 kb on + strand at 2663.643 kb on + strand at 2663.660 kb on - strand at 2663.689 kb on - strand at 2663.728 kb on - strand, within MPMX20_02522 at 2663.735 kb on + strand, within MPMX20_02522 at 2663.741 kb on - strand, within MPMX20_02522 at 2663.741 kb on - strand, within MPMX20_02522 at 2663.741 kb on - strand, within MPMX20_02522 at 2663.753 kb on - strand, within MPMX20_02522 at 2663.755 kb on + strand, within MPMX20_02522 at 2663.758 kb on - strand, within MPMX20_02522 at 2663.763 kb on - strand, within MPMX20_02522 at 2663.763 kb on - strand, within MPMX20_02522 at 2663.772 kb on + strand, within MPMX20_02522 at 2663.772 kb on + strand, within MPMX20_02522 at 2663.772 kb on + strand, within MPMX20_02522 at 2663.779 kb on + strand, within MPMX20_02522 at 2663.780 kb on - strand, within MPMX20_02522 at 2663.780 kb on - strand, within MPMX20_02522 at 2663.780 kb on - strand, within MPMX20_02522 at 2663.787 kb on - strand, within MPMX20_02522 at 2663.787 kb on - strand, within MPMX20_02522 at 2663.787 kb on - strand, within MPMX20_02522 at 2663.787 kb on - strand, within MPMX20_02522 at 2663.787 kb on - strand, within MPMX20_02522 at 2663.787 kb on - strand, within MPMX20_02522 at 2663.787 kb on - strand, within MPMX20_02522 at 2663.792 kb on + strand, within MPMX20_02522 at 2663.843 kb on + strand, within MPMX20_02522 at 2663.851 kb on - strand, within MPMX20_02522 at 2663.859 kb on + strand, within MPMX20_02522 at 2663.859 kb on + strand, within MPMX20_02522 at 2663.859 kb on + strand, within MPMX20_02522 at 2663.859 kb on + strand, within MPMX20_02522 at 2663.861 kb on + strand, within MPMX20_02522 at 2663.867 kb on - strand, within MPMX20_02522 at 2663.876 kb on + strand, within MPMX20_02522 at 2663.882 kb on + strand, within MPMX20_02522 at 2663.882 kb on + strand, within MPMX20_02522 at 2663.882 kb on + strand, within MPMX20_02522 at 2663.882 kb on + strand, within MPMX20_02522 at 2663.882 kb on + strand, within MPMX20_02522 at 2663.882 kb on + strand, within MPMX20_02522 at 2663.882 kb on + strand, within MPMX20_02522 at 2663.890 kb on - strand, within MPMX20_02522 at 2663.890 kb on - strand, within MPMX20_02522 at 2663.890 kb on - strand, within MPMX20_02522 at 2663.890 kb on - strand, within MPMX20_02522 at 2663.934 kb on + strand, within MPMX20_02522 at 2663.934 kb on + strand, within MPMX20_02522 at 2663.936 kb on + strand, within MPMX20_02522 at 2663.939 kb on + strand, within MPMX20_02522 at 2663.941 kb on + strand, within MPMX20_02522 at 2663.988 kb on + strand, within MPMX20_02522 at 2663.988 kb on + strand, within MPMX20_02522 at 2664.004 kb on + strand, within MPMX20_02522 at 2664.096 kb on + strand at 2664.096 kb on + strand at 2664.104 kb on - strand at 2664.145 kb on + strand at 2664.145 kb on + strand at 2664.145 kb on + strand at 2664.145 kb on - strand at 2664.148 kb on - strand at 2664.148 kb on - strand at 2664.150 kb on + strand at 2664.153 kb on - strand at 2664.154 kb on + strand at 2664.161 kb on - strand at 2664.162 kb on + strand at 2664.173 kb on + strand at 2664.173 kb on + strand at 2664.176 kb on + strand at 2664.181 kb on - strand at 2664.209 kb on + strand at 2664.212 kb on - strand, within MPMX20_02523 at 2664.217 kb on - strand, within MPMX20_02523 at 2664.217 kb on - strand, within MPMX20_02523 at 2664.217 kb on - strand, within MPMX20_02523 at 2664.227 kb on - strand, within MPMX20_02523 at 2664.227 kb on - strand, within MPMX20_02523 at 2664.246 kb on - strand, within MPMX20_02523 at 2664.297 kb on + strand, within MPMX20_02523 at 2664.327 kb on + strand, within MPMX20_02523 at 2664.332 kb on - strand, within MPMX20_02523 at 2664.335 kb on - strand, within MPMX20_02523 at 2664.335 kb on - strand, within MPMX20_02523 at 2664.364 kb on + strand, within MPMX20_02523 at 2664.379 kb on - strand, within MPMX20_02523 at 2664.412 kb on - strand, within MPMX20_02523 at 2664.442 kb on - strand, within MPMX20_02523 at 2664.451 kb on + strand, within MPMX20_02523 at 2664.453 kb on - strand, within MPMX20_02523 at 2664.461 kb on + strand, within MPMX20_02523 at 2664.515 kb on + strand, within MPMX20_02523 at 2664.515 kb on + strand, within MPMX20_02523 at 2664.515 kb on + strand, within MPMX20_02523 at 2664.515 kb on + strand, within MPMX20_02523 at 2664.517 kb on + strand, within MPMX20_02523 at 2664.523 kb on - strand, within MPMX20_02523 at 2664.523 kb on - strand, within MPMX20_02523 at 2664.533 kb on + strand, within MPMX20_02523 at 2664.540 kb on + strand, within MPMX20_02523 at 2664.558 kb on + strand, within MPMX20_02523 at 2664.591 kb on - strand, within MPMX20_02523 at 2664.640 kb on - strand at 2664.649 kb on + strand at 2664.649 kb on + strand at 2664.649 kb on + strand at 2664.657 kb on - strand at 2664.667 kb on - strand at 2664.672 kb on - strand at 2664.710 kb on + strand at 2664.725 kb on + strand at 2664.766 kb on + strand at 2664.771 kb on + strand at 2664.774 kb on - strand at 2664.774 kb on - strand at 2664.774 kb on - strand at 2664.774 kb on - strand at 2664.774 kb on - strand at 2664.779 kb on - strand at 2664.799 kb on + strand at 2664.807 kb on - strand at 2664.864 kb on - strand, within MPMX20_02524 at 2664.892 kb on - strand, within MPMX20_02524 at 2664.927 kb on - strand, within MPMX20_02524 at 2664.938 kb on - strand, within MPMX20_02524 at 2664.938 kb on - strand, within MPMX20_02524 at 2664.951 kb on - strand, within MPMX20_02524 at 2665.009 kb on + strand, within MPMX20_02524 at 2665.206 kb on - strand, within MPMX20_02524 at 2665.211 kb on + strand, within MPMX20_02524 at 2665.213 kb on - strand, within MPMX20_02524 at 2665.216 kb on + strand, within MPMX20_02524 at 2665.216 kb on + strand, within MPMX20_02524 at 2665.222 kb on + strand, within MPMX20_02524 at 2665.224 kb on - strand, within MPMX20_02524 at 2665.224 kb on - strand, within MPMX20_02524 at 2665.235 kb on + strand, within MPMX20_02524 at 2665.255 kb on - strand, within MPMX20_02524 at 2665.265 kb on + strand, within MPMX20_02524 at 2665.265 kb on + strand, within MPMX20_02524 at 2665.273 kb on - strand, within MPMX20_02524 at 2665.273 kb on - strand, within MPMX20_02524 at 2665.299 kb on + strand, within MPMX20_02524 at 2665.323 kb on + strand, within MPMX20_02524 at 2665.432 kb on + strand at 2665.493 kb on + strand at 2665.493 kb on + strand at 2665.495 kb on - strand at 2665.501 kb on - strand at 2665.527 kb on - strand at 2665.629 kb on - strand, within MPMX20_02525 at 2665.652 kb on + strand, within MPMX20_02525 at 2665.652 kb on - strand, within MPMX20_02525
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,663,256 + MPMX20_02521 0.76 +0.6 2,663,277 + MPMX20_02521 0.78 -0.7 2,663,277 + MPMX20_02521 0.78 -1.6 2,663,285 - MPMX20_02521 0.79 -0.6 2,663,285 - MPMX20_02521 0.79 -2.1 2,663,285 - MPMX20_02521 0.79 +1.2 2,663,299 - MPMX20_02521 0.80 +0.2 2,663,330 + MPMX20_02521 0.83 -0.4 2,663,338 - MPMX20_02521 0.84 -0.8 2,663,364 + MPMX20_02521 0.86 +1.5 2,663,365 + MPMX20_02521 0.86 -0.8 2,663,373 + MPMX20_02521 0.87 +1.4 2,663,374 + MPMX20_02521 0.87 -0.2 2,663,381 - MPMX20_02521 0.88 +0.2 2,663,402 + MPMX20_02521 0.89 +0.1 2,663,456 + -1.1 2,663,511 + -1.5 2,663,512 + +0.8 2,663,513 + +1.5 2,663,520 - +1.5 2,663,562 - -1.1 2,663,606 - +0.5 2,663,620 - +0.8 2,663,620 - +0.2 2,663,643 + +0.4 2,663,643 + -0.4 2,663,643 + -0.5 2,663,660 - -1.4 2,663,689 - -0.6 2,663,728 - MPMX20_02522 0.10 +0.8 2,663,735 + MPMX20_02522 0.12 +1.1 2,663,741 - MPMX20_02522 0.14 -1.8 2,663,741 - MPMX20_02522 0.14 -0.1 2,663,741 - MPMX20_02522 0.14 +1.0 2,663,753 - MPMX20_02522 0.17 -1.2 2,663,755 + MPMX20_02522 0.18 -0.3 2,663,758 - MPMX20_02522 0.19 -1.1 2,663,763 - MPMX20_02522 0.20 -1.0 2,663,763 - MPMX20_02522 0.20 +0.1 2,663,772 + MPMX20_02522 0.23 -0.4 2,663,772 + MPMX20_02522 0.23 -1.8 2,663,772 + MPMX20_02522 0.23 -2.4 2,663,779 + MPMX20_02522 0.25 +1.2 2,663,780 - MPMX20_02522 0.25 -1.9 2,663,780 - MPMX20_02522 0.25 +1.5 2,663,780 - MPMX20_02522 0.25 -1.5 2,663,787 - MPMX20_02522 0.27 -0.2 2,663,787 - MPMX20_02522 0.27 +0.3 2,663,787 - MPMX20_02522 0.27 +0.0 2,663,787 - MPMX20_02522 0.27 -1.0 2,663,787 - MPMX20_02522 0.27 +2.8 2,663,787 - MPMX20_02522 0.27 +0.2 2,663,787 - MPMX20_02522 0.27 +0.1 2,663,792 + MPMX20_02522 0.28 -1.7 2,663,843 + MPMX20_02522 0.43 -0.3 2,663,851 - MPMX20_02522 0.45 +1.8 2,663,859 + MPMX20_02522 0.47 -1.2 2,663,859 + MPMX20_02522 0.47 +0.5 2,663,859 + MPMX20_02522 0.47 +1.3 2,663,859 + MPMX20_02522 0.47 -1.5 2,663,861 + MPMX20_02522 0.48 -0.9 2,663,867 - MPMX20_02522 0.49 -0.3 2,663,876 + MPMX20_02522 0.52 -1.3 2,663,882 + MPMX20_02522 0.54 -0.7 2,663,882 + MPMX20_02522 0.54 -1.3 2,663,882 + MPMX20_02522 0.54 -0.1 2,663,882 + MPMX20_02522 0.54 +0.9 2,663,882 + MPMX20_02522 0.54 +0.4 2,663,882 + MPMX20_02522 0.54 -0.9 2,663,882 + MPMX20_02522 0.54 +1.2 2,663,890 - MPMX20_02522 0.56 +2.8 2,663,890 - MPMX20_02522 0.56 +0.3 2,663,890 - MPMX20_02522 0.56 +1.2 2,663,890 - MPMX20_02522 0.56 -0.6 2,663,934 + MPMX20_02522 0.68 +0.2 2,663,934 + MPMX20_02522 0.68 -2.2 2,663,936 + MPMX20_02522 0.69 +5.5 2,663,939 + MPMX20_02522 0.69 -2.5 2,663,941 + MPMX20_02522 0.70 -2.7 2,663,988 + MPMX20_02522 0.83 -0.1 2,663,988 + MPMX20_02522 0.83 +1.2 2,664,004 + MPMX20_02522 0.88 +0.0 2,664,096 + -1.5 2,664,096 + -1.3 2,664,104 - +0.4 2,664,145 + +0.8 2,664,145 + -0.9 2,664,145 + -0.5 2,664,145 - +1.2 2,664,148 - -2.1 2,664,148 - -1.2 2,664,150 + -0.9 2,664,153 - -0.9 2,664,154 + -1.5 2,664,161 - -0.4 2,664,162 + +0.3 2,664,173 + -0.5 2,664,173 + -1.3 2,664,176 + +0.8 2,664,181 - -0.2 2,664,209 + -0.9 2,664,212 - MPMX20_02523 0.11 +0.1 2,664,217 - MPMX20_02523 0.12 -1.3 2,664,217 - MPMX20_02523 0.12 -0.5 2,664,217 - MPMX20_02523 0.12 -0.2 2,664,227 - MPMX20_02523 0.14 -2.1 2,664,227 - MPMX20_02523 0.14 -1.8 2,664,246 - MPMX20_02523 0.17 -1.1 2,664,297 + MPMX20_02523 0.28 -0.9 2,664,327 + MPMX20_02523 0.34 -1.1 2,664,332 - MPMX20_02523 0.35 -1.6 2,664,335 - MPMX20_02523 0.35 -1.5 2,664,335 - MPMX20_02523 0.35 +1.2 2,664,364 + MPMX20_02523 0.41 -1.5 2,664,379 - MPMX20_02523 0.44 -1.0 2,664,412 - MPMX20_02523 0.51 -2.3 2,664,442 - MPMX20_02523 0.57 -1.7 2,664,451 + MPMX20_02523 0.59 -0.6 2,664,453 - MPMX20_02523 0.59 +0.0 2,664,461 + MPMX20_02523 0.61 +0.0 2,664,515 + MPMX20_02523 0.72 -1.1 2,664,515 + MPMX20_02523 0.72 -2.4 2,664,515 + MPMX20_02523 0.72 -0.8 2,664,515 + MPMX20_02523 0.72 -0.4 2,664,517 + MPMX20_02523 0.72 -1.4 2,664,523 - MPMX20_02523 0.73 -0.9 2,664,523 - MPMX20_02523 0.73 +2.3 2,664,533 + MPMX20_02523 0.75 +0.1 2,664,540 + MPMX20_02523 0.77 -1.4 2,664,558 + MPMX20_02523 0.80 +1.2 2,664,591 - MPMX20_02523 0.87 -1.1 2,664,640 - -1.1 2,664,649 + -0.8 2,664,649 + -2.0 2,664,649 + -1.6 2,664,657 - -0.4 2,664,667 - -0.9 2,664,672 - -0.8 2,664,710 + +2.2 2,664,725 + +0.5 2,664,766 + -0.5 2,664,771 + -0.6 2,664,774 - -0.6 2,664,774 - -0.4 2,664,774 - +0.5 2,664,774 - +0.1 2,664,774 - -0.4 2,664,779 - -1.8 2,664,799 + -1.6 2,664,807 - -1.4 2,664,864 - MPMX20_02524 0.17 -0.5 2,664,892 - MPMX20_02524 0.21 +1.6 2,664,927 - MPMX20_02524 0.26 -1.5 2,664,938 - MPMX20_02524 0.28 -1.4 2,664,938 - MPMX20_02524 0.28 -0.4 2,664,951 - MPMX20_02524 0.30 -0.5 2,665,009 + MPMX20_02524 0.38 -2.0 2,665,206 - MPMX20_02524 0.66 -0.1 2,665,211 + MPMX20_02524 0.67 +0.4 2,665,213 - MPMX20_02524 0.67 -0.5 2,665,216 + MPMX20_02524 0.67 -2.0 2,665,216 + MPMX20_02524 0.67 -0.3 2,665,222 + MPMX20_02524 0.68 -1.9 2,665,224 - MPMX20_02524 0.69 -0.4 2,665,224 - MPMX20_02524 0.69 -0.5 2,665,235 + MPMX20_02524 0.70 -0.2 2,665,255 - MPMX20_02524 0.73 -1.3 2,665,265 + MPMX20_02524 0.74 -0.5 2,665,265 + MPMX20_02524 0.74 -1.1 2,665,273 - MPMX20_02524 0.75 -0.7 2,665,273 - MPMX20_02524 0.75 +0.4 2,665,299 + MPMX20_02524 0.79 -2.3 2,665,323 + MPMX20_02524 0.83 +0.5 2,665,432 + -0.1 2,665,493 + -0.5 2,665,493 + -0.9 2,665,495 - -0.5 2,665,501 - -1.2 2,665,527 - -1.2 2,665,629 - MPMX20_02525 0.12 +0.1 2,665,652 + MPMX20_02525 0.15 +1.2 2,665,652 - MPMX20_02525 0.15 +0.0
Or see this region's nucleotide sequence